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The map label for this gene is oppC

Identifier: 54020377

GI number: 54020377

Start: 203989

End: 204954

Strand: Reverse

Name: oppC

Synonym: mhp168

Alternate gene names: 54020377

Gene position: 204954-203989 (Counterclockwise)

Preceding gene: 54020378

Following gene: 54020376

Centisome position: 22.96

GC content: 31.99

Gene sequence:

>966_bases
ATGACCCATTTTCCTTCAATTGAGAAATATATTGACCAAAACTTAAAACCAAACCCATTTTTACAACCTTTTTCTTATAA
AATGTGGAAATTGATGGTTGCTCAGGCCAAAAACTTTGATCGAAATTATTTTGGTAAACCTCGGAATAATTTCTATGAAG
TTTTTTTAAGATTTTCACGTTCATTTTCCGGAGTTTTTGGTCTTGTTACTATTGGATTTATGCTAATTTTAGCACTAATT
ATTCCATTTACAACCGGATCGCCGACAGAATTACGTCCTAATATGAAAAATATTAACTATTTTAGTCAAGGATTTATTCT
TGGAACTGACTCACAAGGTCGCGATGTTTGGGCATTTTTATGGCACGGGCTGCGTTTTTCGTTAATTTTAAGTTTTATTG
TTGCTCTTTTTGATGTAGCCTTAGGGACTTTATTTGGGACCTTAATGGGAAATTTTGATCTTTTTGATAAAATTTTTACT
TTTATTATTAAGATAATTTCTAATATCCCAACAATCTTAGTAATTATTTTGATGACTTTGGTTCTTCGGCCAAGTTTTTG
AGTTCTAATTTTGTCTTTTTCACTTACAGGGTGAATTGGACTTGCAAATCAAGTTCGAGCCCAAATTAAAAGAGCAAGAA
ATTTTACTTGGGTGATTGCCTCTAGAGTTTTAGGTACCCCTTCTTATAAAATTCTTTATAATTTTGTCCCGGTAATTATT
CCGCTTTTAATTACAAATATCGTTTTTGTAATTCCTGGAACAATTCTTGGTGAAACTGGACTTGCATTTATTGGACTTTC
ACTTCCAAATGTTGCTACTTTAGGTAATGCAATTAATGCGGGAATTCCAATTGTAACTTTATATCCCCGTTATGTTTTAA
TTCCTGCATTTTTCTTAATTTTACTTACCTCTTCAATTCAAATGATTGGAAATTCAGTTCAGGATGCCCTAAGGAGGCAA
AGATAA

Upstream 100 bases:

>100_bases
TTTTGGTAATAGTTTATTCACTTTTGACAATAATTTCCTATACTTTAAGAGATATAAGTTATGAATTACTTGATCCGCGA
ATTAGAAGGAGAGCAAAATA

Downstream 100 bases:

>100_bases
AATGATTTCGTATTTTTATTCAAAATCAGCACCGCAGTGTCTTAAAACTGAAAATCCCAGATTTTGTTATAAACTAAATA
AAAATTTAGTAAAATTTCAA

Product: oligopeptide transport system permease protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MTHFPSIEKYIDQNLKPNPFLQPFSYKMWKLMVAQAKNFDRNYFGKPRNNFYEVFLRFSRSFSGVFGLVTIGFMLILALI
IPFTTGSPTELRPNMKNINYFSQGFILGTDSQGRDVWAFLWHGLRFSLILSFIVALFDVALGTLFGTLMGNFDLFDKIFT
FIIKIISNIPTILVIILMTLVLRPSFWVLILSFSLTGWIGLANQVRAQIKRARNFTWVIASRVLGTPSYKILYNFVPVII
PLLITNIVFVIPGTILGETGLAFIGLSLPNVATLGNAINAGIPIVTLYPRYVLIPAFFLILLTSSIQMIGNSVQDALRRQ
R

Sequences:

>Translated_321_residues
MTHFPSIEKYIDQNLKPNPFLQPFSYKMWKLMVAQAKNFDRNYFGKPRNNFYEVFLRFSRSFSGVFGLVTIGFMLILALI
IPFTTGSPTELRPNMKNINYFSQGFILGTDSQGRDVWAFLWHGLRFSLILSFIVALFDVALGTLFGTLMGNFDLFDKIFT
FIIKIISNIPTILVIILMTLVLRPSF*VLILSFSLTG*IGLANQVRAQIKRARNFTWVIASRVLGTPSYKILYNFVPVII
PLLITNIVFVIPGTILGETGLAFIGLSLPNVATLGNAINAGIPIVTLYPRYVLIPAFFLILLTSSIQMIGNSVQDALRRQ
R
>Mature_320_residues
THFPSIEKYIDQNLKPNPFLQPFSYKMWKLMVAQAKNFDRNYFGKPRNNFYEVFLRFSRSFSGVFGLVTIGFMLILALII
PFTTGSPTELRPNMKNINYFSQGFILGTDSQGRDVWAFLWHGLRFSLILSFIVALFDVALGTLFGTLMGNFDLFDKIFTF
IIKIISNIPTILVIILMTLVLRPSF*VLILSFSLTG*IGLANQVRAQIKRARNFTWVIASRVLGTPSYKILYNFVPVIIP
LLITNIVFVIPGTILGETGLAFIGLSLPNVATLGNAINAGIPIVTLYPRYVLIPAFFLILLTSSIQMIGNSVQDALRRQR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane. Is expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788505, Length=290, Percent_Identity=28.9655172413793, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1787054, Length=277, Percent_Identity=23.1046931407942, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI1787498, Length=292, Percent_Identity=23.6301369863014, Blast_Score=61, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35916; Mature: 35785

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHFPSIEKYIDQNLKPNPFLQPFSYKMWKLMVAQAKNFDRNYFGKPRNNFYEVFLRFSR
CCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
SFSGVFGLVTIGFMLILALIIPFTTGSPTELRPNMKNINYFSQGFILGTDSQGRDVWAFL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCEEECCCCCCHHHHHH
WHGLRFSLILSFIVALFDVALGTLFGTLMGNFDLFDKIFTFIIKIISNIPTILVIILMTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VLRPSFVLILSFSLTGIGLANQVRAQIKRARNFTWVIASRVLGTPSYKILYNFVPVIIPL
HHCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LITNIVFVIPGTILGETGLAFIGLSLPNVATLGNAINAGIPIVTLYPRYVLIPAFFLILL
HHHHHHHHHCCHHHCCCCHHEEECCCCCHHHHCCHHHCCCCEEEHHHHHHHHHHHHHHHH
TSSIQMIGNSVQDALRRQR
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
THFPSIEKYIDQNLKPNPFLQPFSYKMWKLMVAQAKNFDRNYFGKPRNNFYEVFLRFSR
CCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
SFSGVFGLVTIGFMLILALIIPFTTGSPTELRPNMKNINYFSQGFILGTDSQGRDVWAFL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCEEECCCCCCHHHHHH
WHGLRFSLILSFIVALFDVALGTLFGTLMGNFDLFDKIFTFIIKIISNIPTILVIILMTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VLRPSFVLILSFSLTGIGLANQVRAQIKRARNFTWVIASRVLGTPSYKILYNFVPVIIPL
HHCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LITNIVFVIPGTILGETGLAFIGLSLPNVATLGNAINAGIPIVTLYPRYVLIPAFFLILL
HHHHHHHHHCCHHHCCCCHHEEECCCCCHHHHCCHHHCCCCEEEHHHHHHHHHHHHHHHH
TSSIQMIGNSVQDALRRQR
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377; 3145906 [H]