Definition | Mycoplasma hyopneumoniae 232, complete genome. |
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Accession | NC_006360 |
Length | 892,758 |
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The map label for this gene is 54020373
Identifier: 54020373
GI number: 54020373
Start: 192435
End: 195113
Strand: Reverse
Name: 54020373
Synonym: mhp164
Alternate gene names: NA
Gene position: 195113-192435 (Counterclockwise)
Preceding gene: 54020374
Following gene: 54020372
Centisome position: 21.86
GC content: 31.77
Gene sequence:
>2679_bases ATGAAAAAAATAAAAAAACTTTTAATTTTAAACACTTTTTTTCCAATTTCGCTGCTTTCATTAGTTTCTTGTAAAAGCGC CCTTGAAAAAAATCGGCAAGATTTTGACTTTGGTGTTGCAACTCCGACAGTTAATACACTAAATTATATAAAGAATAATT CAGCTCATGATATTTTAAATTCACTTGTTGAATCATTTGTAAAACCTGGGCCTTCGGCTTCTAAATCTTATGGAGCAAAA CTAAATCTGCCCGGAATTTCTTTTGAATTATATAAAACAAGTCTTCCTTCTTCAAGTGGAAATGAAATTATGGAAAATCC TGCTTTGATCTCAACAGCTGCATCTTCTTATCAAATTAGTGATTTTGGAATGACTGCGGGGGTAGTTTCTCCTTCAAATG GTGGGGGTAAATCCTTTATTGGAATTCAAAATGAGAGCCAATCAATTGTTTCAACAACAATTTTTTTAAATCAAGGGGCC TCAAAATGATCAAATAAACAACCTGTGGTTGCCCAAAATTTTATTGATTATATTCTTTATGTGCTAAATATTAATGTTGC CTCCCCAAATTTAGTTAAAACTTTATCGCTAAATATCAAAAATGCCCAACAAATTAACTCGCTTCAACAAGATTATGTCT CAAAATTTGGTAGTCCTTATCGTAATCCTTTTGGTCAAAAAAGTTATAAAAAAGATGCAAAAACTGGGAAGGTTAGTCTT GATTTTGACCAAAAAGTTTTCCAGTCACAAAATAAAGGTGATCAAGATTTTGTTGATCAATTTCAAAAATTAGCAAGTGG CTTTGGAATGTATACAGGTCAAATTTTTGAGCAGATGACAAATAAAGAAGTAGTCGAACTTGTTCAGGCAAACTTATCAC TAAATCCAGATTTTAACTACAAATCCAAAGAAATTTATGTAATTGAAAACGGTAAAAAAACTACGATAAAACTTACAAGA AATCCATTTTTAGATCCAAGCCAAGTTTTTGATGGCCCAAATTTAGTCCCAAGATATGATTTTTTACCTGGTGATGAATA TGGACTTCGAATCCAATTTGAAGACTCAGGTGCCAAAAAATTTATTAATTTATTCCAGCAAATTATCAGACCTGAATCCC TAAGGCCGATTAATCGTGAATTTGTTGAGATTAATGCCGGGGGAATTGATAATTTTGGAACTGATCTTTCAAAATTTATG ACAAATGGCCCCTTTGATATCACCGAGATCAACTGGGGTTCCCAAGGTTCAATGATTCTTGAAAAAAATCAAAGTTATTA TTCGGCTGATAAAACAATTCCAAGTAAAATTAAAATATTTTTTGCCGAACAGCCCGAACTTCTTTCTTCACTTTTTTTAG ATGGATATATTGCTAAAACAAAAATTCCAACTACTTTTCAATCGAAATTTTGATCAGAAAACAAAACAAGACAGTATATG CAAAAATTAACCGGTTATGGGACGATTGGAATTCAACTAAACCTTGATAATGTTAAAAAAGGACAGTCCTGATTACAAGA TCCAGATCTTAGAAGAGCAATTTTATATGGAATTAATAGGGTTGATCTTTTGAATTTATACGGCCTTGATCATTCTTTTG TCCAAACTACTTGGTCAAATTTTGACGGGATTCTAACCGCTCGGGGTTATCCGCTTGAGACTTTCTTAGGAGATCGAAAA TATAAATCTGAGTTTAAAGGAAAAGATGGTAAAGAGCTTGAATTTCCGGTTTTAGCCCAGAATTATAAAAAACATTTAGC AAAAAGTGTATGATTTGAGGCTGTTCCAAGAAAAGATGAAATTTATAATCCTCAAGTTGCAAAGTTTTTCCTTGATCGCT TTAGGAAAAAATACCCAAAAGTTGCTAAGGTTAGTCTAAATTTTATTTATAAAGATGATAATGAAGAAAAAGTTGCCACT GGTCTTCAAGATATTCTTTCGCGAAATACAAATAATTTTATCCAAATCGAGCCAGTAAGGCTTCCTGATGGGATTTATCA ACAACGGATTGCTAAAGGTGAATTTGATTTTACAATGAAAAATTTTGACTTTTTCAACATCGGAAGTGCCCAACCCCATT CTTATATTAAAGCTTTTTTTAATTCTGATGAGATTTCTCCCCGCGATAATAAGTTTTCCGGACTTGAGTCAAATCCAGCC GCTTCACTTACTTATTGGAAAATGTGGAACTCACTTACAAAAGAAGAAAAAGATGCTTTAGTAAAAAGGCTTGAAATTTC TCCTATTTATCTTGCAAAATTTGAGGAGTTAATTACAAGAAAAATTAGGCTAGATAGTCAAAAAAATCCGATTTTTAAAG AGGTTTTTCTAAATAAAGAACTAAAAGACAAAGCACTAGATATTAATCAAAAGCCAATTTTAATACCTGAATATGAAGAA AGTCTTGATCAATATAATGCTCGGATTGATGCTTTTTTTAATGGTCTTTTTAGTGAACAAGAGAAAAAAGAAGGTTGGAC ACAAAATAAGGTTTTTGATTTTATAGTTATTTTTGAAAAAATTATCCGCGAATTTGTTCCAATTATCCCAATTATGGAGG TTGATACTTACTGAATTATTAACCGAATTCGTGCAGGCGATAGTAACTCTTTCCAATTTGCATTTGATGTTGAAAACATC AAAGTTAATTATCTAAGTCCTGAAGATGGTAAAGAATAG
Upstream 100 bases:
>100_bases GAAAATGGAAAAAACTATCAAACAGCACCAACTTATATTGAAAAAACAGCAAAAGGTAACTATTTGGTAATAAGGCCACA ATTTAAATAAAGGGAAAATC
Downstream 100 bases:
>100_bases AAGCGAATTTTAGTCTCTGAATTTAAAAAAGTACTATAAATTTATAGTACTTTTTTATTTTTGAGGTTAAAAATTTTAGT GGTTAAAAGATTTAAATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Oligopeptide ABC Transporter
Number of amino acids: Translated: 892; Mature: 892
Protein sequence:
>892_residues MKKIKKLLILNTFFPISLLSLVSCKSALEKNRQDFDFGVATPTVNTLNYIKNNSAHDILNSLVESFVKPGPSASKSYGAK LNLPGISFELYKTSLPSSSGNEIMENPALISTAASSYQISDFGMTAGVVSPSNGGGKSFIGIQNESQSIVSTTIFLNQGA SKWSNKQPVVAQNFIDYILYVLNINVASPNLVKTLSLNIKNAQQINSLQQDYVSKFGSPYRNPFGQKSYKKDAKTGKVSL DFDQKVFQSQNKGDQDFVDQFQKLASGFGMYTGQIFEQMTNKEVVELVQANLSLNPDFNYKSKEIYVIENGKKTTIKLTR NPFLDPSQVFDGPNLVPRYDFLPGDEYGLRIQFEDSGAKKFINLFQQIIRPESLRPINREFVEINAGGIDNFGTDLSKFM TNGPFDITEINWGSQGSMILEKNQSYYSADKTIPSKIKIFFAEQPELLSSLFLDGYIAKTKIPTTFQSKFWSENKTRQYM QKLTGYGTIGIQLNLDNVKKGQSWLQDPDLRRAILYGINRVDLLNLYGLDHSFVQTTWSNFDGILTARGYPLETFLGDRK YKSEFKGKDGKELEFPVLAQNYKKHLAKSVWFEAVPRKDEIYNPQVAKFFLDRFRKKYPKVAKVSLNFIYKDDNEEKVAT GLQDILSRNTNNFIQIEPVRLPDGIYQQRIAKGEFDFTMKNFDFFNIGSAQPHSYIKAFFNSDEISPRDNKFSGLESNPA ASLTYWKMWNSLTKEEKDALVKRLEISPIYLAKFEELITRKIRLDSQKNPIFKEVFLNKELKDKALDINQKPILIPEYEE SLDQYNARIDAFFNGLFSEQEKKEGWTQNKVFDFIVIFEKIIREFVPIIPIMEVDTYWIINRIRAGDSNSFQFAFDVENI KVNYLSPEDGKE
Sequences:
>Translated_892_residues MKKIKKLLILNTFFPISLLSLVSCKSALEKNRQDFDFGVATPTVNTLNYIKNNSAHDILNSLVESFVKPGPSASKSYGAK LNLPGISFELYKTSLPSSSGNEIMENPALISTAASSYQISDFGMTAGVVSPSNGGGKSFIGIQNESQSIVSTTIFLNQGA SK*SNKQPVVAQNFIDYILYVLNINVASPNLVKTLSLNIKNAQQINSLQQDYVSKFGSPYRNPFGQKSYKKDAKTGKVSL DFDQKVFQSQNKGDQDFVDQFQKLASGFGMYTGQIFEQMTNKEVVELVQANLSLNPDFNYKSKEIYVIENGKKTTIKLTR NPFLDPSQVFDGPNLVPRYDFLPGDEYGLRIQFEDSGAKKFINLFQQIIRPESLRPINREFVEINAGGIDNFGTDLSKFM TNGPFDITEINWGSQGSMILEKNQSYYSADKTIPSKIKIFFAEQPELLSSLFLDGYIAKTKIPTTFQSKF*SENKTRQYM QKLTGYGTIGIQLNLDNVKKGQS*LQDPDLRRAILYGINRVDLLNLYGLDHSFVQTTWSNFDGILTARGYPLETFLGDRK YKSEFKGKDGKELEFPVLAQNYKKHLAKSV*FEAVPRKDEIYNPQVAKFFLDRFRKKYPKVAKVSLNFIYKDDNEEKVAT GLQDILSRNTNNFIQIEPVRLPDGIYQQRIAKGEFDFTMKNFDFFNIGSAQPHSYIKAFFNSDEISPRDNKFSGLESNPA ASLTYWKMWNSLTKEEKDALVKRLEISPIYLAKFEELITRKIRLDSQKNPIFKEVFLNKELKDKALDINQKPILIPEYEE SLDQYNARIDAFFNGLFSEQEKKEGWTQNKVFDFIVIFEKIIREFVPIIPIMEVDTY*IINRIRAGDSNSFQFAFDVENI KVNYLSPEDGKE >Mature_892_residues MKKIKKLLILNTFFPISLLSLVSCKSALEKNRQDFDFGVATPTVNTLNYIKNNSAHDILNSLVESFVKPGPSASKSYGAK LNLPGISFELYKTSLPSSSGNEIMENPALISTAASSYQISDFGMTAGVVSPSNGGGKSFIGIQNESQSIVSTTIFLNQGA SK*SNKQPVVAQNFIDYILYVLNINVASPNLVKTLSLNIKNAQQINSLQQDYVSKFGSPYRNPFGQKSYKKDAKTGKVSL DFDQKVFQSQNKGDQDFVDQFQKLASGFGMYTGQIFEQMTNKEVVELVQANLSLNPDFNYKSKEIYVIENGKKTTIKLTR NPFLDPSQVFDGPNLVPRYDFLPGDEYGLRIQFEDSGAKKFINLFQQIIRPESLRPINREFVEINAGGIDNFGTDLSKFM TNGPFDITEINWGSQGSMILEKNQSYYSADKTIPSKIKIFFAEQPELLSSLFLDGYIAKTKIPTTFQSKF*SENKTRQYM QKLTGYGTIGIQLNLDNVKKGQS*LQDPDLRRAILYGINRVDLLNLYGLDHSFVQTTWSNFDGILTARGYPLETFLGDRK YKSEFKGKDGKELEFPVLAQNYKKHLAKSV*FEAVPRKDEIYNPQVAKFFLDRFRKKYPKVAKVSLNFIYKDDNEEKVAT GLQDILSRNTNNFIQIEPVRLPDGIYQQRIAKGEFDFTMKNFDFFNIGSAQPHSYIKAFFNSDEISPRDNKFSGLESNPA ASLTYWKMWNSLTKEEKDALVKRLEISPIYLAKFEELITRKIRLDSQKNPIFKEVFLNKELKDKALDINQKPILIPEYEE SLDQYNARIDAFFNGLFSEQEKKEGWTQNKVFDFIVIFEKIIREFVPIIPIMEVDTY*IINRIRAGDSNSFQFAFDVENI KVNYLSPEDGKE
Specific function: Unknown
COG id: COG4166
COG function: function code E; ABC-type oligopeptide transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 100883; Mature: 100883
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIKKLLILNTFFPISLLSLVSCKSALEKNRQDFDFGVATPTVNTLNYIKNNSAHDILN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHH SLVESFVKPGPSASKSYGAKLNLPGISFELYKTSLPSSSGNEIMENPALISTAASSYQIS HHHHHHHCCCCCCCCCCCCEECCCCCEEEEEEECCCCCCCCHHHCCCCCEEECCCCEEEE DFGMTAGVVSPSNGGGKSFIGIQNESQSIVSTTIFLNQGASKSNKQPVVAQNFIDYILYV CCCCEECEECCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHH LNINVASPNLVKTLSLNIKNAQQINSLQQDYVSKFGSPYRNPFGQKSYKKDAKTGKVSLD HEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCEEEEC FDQKVFQSQNKGDQDFVDQFQKLASGFGMYTGQIFEQMTNKEVVELVQANLSLNPDFNYK HHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCC SKEIYVIENGKKTTIKLTRNPFLDPSQVFDGPNLVPRYDFLPGDEYGLRIQFEDSGAKKF CCEEEEEECCCEEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHH INLFQQIIRPESLRPINREFVEINAGGIDNFGTDLSKFMTNGPFDITEINWGSQGSMILE HHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCEEEE KNQSYYSADKTIPSKIKIFFAEQPELLSSLFLDGYIAKTKIPTTFQSKFSENKTRQYMQK CCCCHHHCCCCCCCEEEEEECCCHHHHHHHHHCCEEEECCCCHHHHHHHCCHHHHHHHHH LTGYGTIGIQLNLDNVKKGQSLQDPDLRRAILYGINRVDLLNLYGLDHSFVQTTWSNFDG HCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCC ILTARGYPLETFLGDRKYKSEFKGKDGKELEFPVLAQNYKKHLAKSVFEAVPRKDEIYNP EEEECCCCHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCH QVAKFFLDRFRKKYPKVAKVSLNFIYKDDNEEKVATGLQDILSRNTNNFIQIEPVRLPDG HHHHHHHHHHHHHCCCEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCH IYQQRIAKGEFDFTMKNFDFFNIGSAQPHSYIKAFFNSDEISPRDNKFSGLESNPAASLT HHHHHHHCCCCCEEEECCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH YWKMWNSLTKEEKDALVKRLEISPIYLAKFEELITRKIRLDSQKNPIFKEVFLNKELKDK HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHH ALDINQKPILIPEYEESLDQYNARIDAFFNGLFSEQEKKEGWTQNKVFDFIVIFEKIIRE HCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FVPIIPIMEVDTYIINRIRAGDSNSFQFAFDVENIKVNYLSPEDGKE HHCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECEEEEEEECCCCCCC >Mature Secondary Structure MKKIKKLLILNTFFPISLLSLVSCKSALEKNRQDFDFGVATPTVNTLNYIKNNSAHDILN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHH SLVESFVKPGPSASKSYGAKLNLPGISFELYKTSLPSSSGNEIMENPALISTAASSYQIS HHHHHHHCCCCCCCCCCCCEECCCCCEEEEEEECCCCCCCCHHHCCCCCEEECCCCEEEE DFGMTAGVVSPSNGGGKSFIGIQNESQSIVSTTIFLNQGASKSNKQPVVAQNFIDYILYV CCCCEECEECCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHH LNINVASPNLVKTLSLNIKNAQQINSLQQDYVSKFGSPYRNPFGQKSYKKDAKTGKVSLD HEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCEEEEC FDQKVFQSQNKGDQDFVDQFQKLASGFGMYTGQIFEQMTNKEVVELVQANLSLNPDFNYK HHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCC SKEIYVIENGKKTTIKLTRNPFLDPSQVFDGPNLVPRYDFLPGDEYGLRIQFEDSGAKKF CCEEEEEECCCEEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHH INLFQQIIRPESLRPINREFVEINAGGIDNFGTDLSKFMTNGPFDITEINWGSQGSMILE HHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCEEEE KNQSYYSADKTIPSKIKIFFAEQPELLSSLFLDGYIAKTKIPTTFQSKFSENKTRQYMQK CCCCHHHCCCCCCCEEEEEECCCHHHHHHHHHCCEEEECCCCHHHHHHHCCHHHHHHHHH LTGYGTIGIQLNLDNVKKGQSLQDPDLRRAILYGINRVDLLNLYGLDHSFVQTTWSNFDG HCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCC ILTARGYPLETFLGDRKYKSEFKGKDGKELEFPVLAQNYKKHLAKSVFEAVPRKDEIYNP EEEECCCCHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCH QVAKFFLDRFRKKYPKVAKVSLNFIYKDDNEEKVATGLQDILSRNTNNFIQIEPVRLPDG HHHHHHHHHHHHHCCCEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCH IYQQRIAKGEFDFTMKNFDFFNIGSAQPHSYIKAFFNSDEISPRDNKFSGLESNPAASLT HHHHHHHCCCCCEEEECCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH YWKMWNSLTKEEKDALVKRLEISPIYLAKFEELITRKIRLDSQKNPIFKEVFLNKELKDK HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHH ALDINQKPILIPEYEESLDQYNARIDAFFNGLFSEQEKKEGWTQNKVFDFIVIFEKIIRE HCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FVPIIPIMEVDTYIINRIRAGDSNSFQFAFDVENIKVNYLSPEDGKE HHCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA