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The map label for this gene is recR

Identifier: 54020351

GI number: 54020351

Start: 142301

End: 142885

Strand: Reverse

Name: recR

Synonym: mhp121

Alternate gene names: 54020351

Gene position: 142885-142301 (Counterclockwise)

Preceding gene: 54020352

Following gene: 54020350

Centisome position: 16.0

GC content: 28.72

Gene sequence:

>585_bases
ATGATCAAAGAAACATTTAAAAATCTTGCTGAGGATTTAAGAAAAATCCCGGGAATTTCCAAAAAACAAGCAATGCGAAT
TTTGTCTTTTTTGGTTGATGTTCCAATTGAAAAAATTGAAAATTTTGTTAGAGCAATTTGTGATTTAAAAAAAAACACAC
AATATTGTGAAAAATGTGGGTATTTAAATACTAATCCAGTTTGTGAAATATGCCTTGATTTCCAACGGTCTTTTAAAATT
TTAGTAGTTGAAAATACCGAAATGATTGCTAAATTTGAAGAATATGGAAAATATGATGGTCAATATTTTGTCTTTGGTAA
ATATGATATTAAAAATTTAGAAAATCATAATACCCAAATTAAAAAATTAGCTGATTTAGCCGCTAATAAAAGTGAGATAA
TTCTTGGTTTATCTTCGACAATGGAGGGACTGATTTTTGCAAATTATCTCGCAAAACACGAGTTTTTATCCGGCCTTAAA
ATTACTCGGCTTGCAACTGGAATTCCATTTGGAGCAATAATTGATTATATCGATAATATCACCTTAGATCAAGCGCTTAA
AAATCGACAAGAAATGGAAAAATAA

Upstream 100 bases:

>100_bases
AAACATTAGAAGATTTACTATCAATTACATTAAATCAAGCATTATTGAAAATTAAAGAAGAAAACGAAAAAATAACCGAT
TATCCAAATCAAGTTTAATT

Downstream 100 bases:

>100_bases
ATATGTTTATTAGTTTTGAAGGAATTGATGCAAGCGGAAAATCAACCGTGATGGACTTATTTGCAAAGTATTTAAAAATC
AAATTTCCCGAAAAAGAGAT

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MIKETFKNLAEDLRKIPGISKKQAMRILSFLVDVPIEKIENFVRAICDLKKNTQYCEKCGYLNTNPVCEICLDFQRSFKI
LVVENTEMIAKFEEYGKYDGQYFVFGKYDIKNLENHNTQIKKLADLAANKSEIILGLSSTMEGLIFANYLAKHEFLSGLK
ITRLATGIPFGAIIDYIDNITLDQALKNRQEMEK

Sequences:

>Translated_194_residues
MIKETFKNLAEDLRKIPGISKKQAMRILSFLVDVPIEKIENFVRAICDLKKNTQYCEKCGYLNTNPVCEICLDFQRSFKI
LVVENTEMIAKFEEYGKYDGQYFVFGKYDIKNLENHNTQIKKLADLAANKSEIILGLSSTMEGLIFANYLAKHEFLSGLK
ITRLATGIPFGAIIDYIDNITLDQALKNRQEMEK
>Mature_194_residues
MIKETFKNLAEDLRKIPGISKKQAMRILSFLVDVPIEKIENFVRAICDLKKNTQYCEKCGYLNTNPVCEICLDFQRSFKI
LVVENTEMIAKFEEYGKYDGQYFVFGKYDIKNLENHNTQIKKLADLAANKSEIILGLSSTMEGLIFANYLAKHEFLSGLK
ITRLATGIPFGAIIDYIDNITLDQALKNRQEMEK

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recR family [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=193, Percent_Identity=26.4248704663212, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967 [H]

Pfam domain/function: PF02132 RecR [H]

EC number: NA

Molecular weight: Translated: 22279; Mature: 22279

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKETFKNLAEDLRKIPGISKKQAMRILSFLVDVPIEKIENFVRAICDLKKNTQYCEKCG
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHCC
YLNTNPVCEICLDFQRSFKILVVENTEMIAKFEEYGKYDGQYFVFGKYDIKNLENHNTQI
CCCCCHHHHHHHHHHCCEEEEEEECHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHH
KKLADLAANKSEIILGLSSTMEGLIFANYLAKHEFLSGLKITRLATGIPFGAIIDYIDNI
HHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHCC
TLDQALKNRQEMEK
CHHHHHHHHHHCCC
>Mature Secondary Structure
MIKETFKNLAEDLRKIPGISKKQAMRILSFLVDVPIEKIENFVRAICDLKKNTQYCEKCG
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHCC
YLNTNPVCEICLDFQRSFKILVVENTEMIAKFEEYGKYDGQYFVFGKYDIKNLENHNTQI
CCCCCHHHHHHHHHHCCEEEEEEECHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHH
KKLADLAANKSEIILGLSSTMEGLIFANYLAKHEFLSGLKITRLATGIPFGAIIDYIDNI
HHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHCC
TLDQALKNRQEMEK
CHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11353084 [H]