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The map label for this gene is rsmI [H]

Identifier: 54020348

GI number: 54020348

Start: 140072

End: 140806

Strand: Reverse

Name: rsmI [H]

Synonym: mhp118

Alternate gene names: 54020348

Gene position: 140806-140072 (Counterclockwise)

Preceding gene: 54020349

Following gene: 54020347

Centisome position: 15.77

GC content: 28.44

Gene sequence:

>735_bases
ATGTCAGCAAAAATTACTGTTTTAGCCACCCCAATTGGAAATTTAAAGGACATCAGTCTCCGCGGAATTGAGGCCTTACG
TGAAGCCGAACTAATTTTATGCGAGGATTCACGGGTTTCGCGAAAATTATTAAATTTTTTAGAAATTTATGATAAAAAAC
TTATTTCTTATCATAAATTTAACGAAAATTCTGTTATTTCAAAAATTTCGCCGTTAATTTTTTCGGGAAAGAAGGTCTTA
TTAATTTCAGATGCAGGTTCTCCCTTAGTTAGTGATCCAGGGCAATTTTTAATAAACTGAGCACATAAAAATGAAATTGA
TGTTGATTTTTTGCCAGGACCTTGCGCATTTGTTTCTGCTTTTGTCCTTTCCGGTTTTGATTCACCTCTGATTTTTATGG
GTTTTTTTAATTCACGAAAACAACAAATAATTAAGCAAATAACTATTTTTAAGCCAAATTTTAGTTATATTTTTTATATT
TCACCGCATAAATTAATTAATATTCTGGAAGTAATTAAAGAAATTTATGGTGATAATATTGAAATATTTTTGGTAAAGGA
GATGACAAAATTACACCAAAAATATTTTTTTGGCACACCAATTTCTATAATTAATCAGCTAAAAGACTCATTAAAAGGCG
AATTTACAATGGTTTTGCGGCTAAAAAACGAGAAGGATTTGCAGATAAAAAAAAAGAAAAATAAATATCAAAAATTTTCT
AAAAATAATGTATAA

Upstream 100 bases:

>100_bases
GCAGTCCTCACACAAATTTTTAACTACCTTAGATCAGAACGAAAATTTTAATGTTCAAAAATCCGCATTTTTAGTACGGT
TGAACATTATTTTATAAAAA

Downstream 100 bases:

>100_bases
TTAAAAGTTAAAAATATTTGAGGTGTTAAAAAATGATTAATAAACATATAAGTCAAATTCTCTATAACCGTGATCAAATT
AAAGCGAGAATTGCTGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MSAKITVLATPIGNLKDISLRGIEALREAELILCEDSRVSRKLLNFLEIYDKKLISYHKFNENSVISKISPLIFSGKKVL
LISDAGSPLVSDPGQFLINWAHKNEIDVDFLPGPCAFVSAFVLSGFDSPLIFMGFFNSRKQQIIKQITIFKPNFSYIFYI
SPHKLINILEVIKEIYGDNIEIFLVKEMTKLHQKYFFGTPISIINQLKDSLKGEFTMVLRLKNEKDLQIKKKKNKYQKFS
KNNV

Sequences:

>Translated_244_residues
MSAKITVLATPIGNLKDISLRGIEALREAELILCEDSRVSRKLLNFLEIYDKKLISYHKFNENSVISKISPLIFSGKKVL
LISDAGSPLVSDPGQFLIN*AHKNEIDVDFLPGPCAFVSAFVLSGFDSPLIFMGFFNSRKQQIIKQITIFKPNFSYIFYI
SPHKLINILEVIKEIYGDNIEIFLVKEMTKLHQKYFFGTPISIINQLKDSLKGEFTMVLRLKNEKDLQIKKKKNKYQKFS
KNNV
>Mature_243_residues
SAKITVLATPIGNLKDISLRGIEALREAELILCEDSRVSRKLLNFLEIYDKKLISYHKFNENSVISKISPLIFSGKKVLL
ISDAGSPLVSDPGQFLIN*AHKNEIDVDFLPGPCAFVSAFVLSGFDSPLIFMGFFNSRKQQIIKQITIFKPNFSYIFYIS
PHKLINILEVIKEIYGDNIEIFLVKEMTKLHQKYFFGTPISIINQLKDSLKGEFTMVLRLKNEKDLQIKKKKNKYQKFSK
NNV

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=225, Percent_Identity=31.1111111111111, Blast_Score=114, Evalue=6e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 27796; Mature: 27665

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAKITVLATPIGNLKDISLRGIEALREAELILCEDSRVSRKLLNFLEIYDKKLISYHKF
CCCEEEEEECCCCCCCCCHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCC
NENSVISKISPLIFSGKKVLLISDAGSPLVSDPGQFLINAHKNEIDVDFLPGPCAFVSAF
CCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEECCCCEEEEEECCCHHHHHHHH
VLSGFDSPLIFMGFFNSRKQQIIKQITIFKPNFSYIFYISPHKLINILEVIKEIYGDNIE
HHCCCCCCEEEEEHHCHHHHHHHHHHHEECCCCCEEEEECHHHHHHHHHHHHHHHCCCEE
IFLVKEMTKLHQKYFFGTPISIINQLKDSLKGEFTMVLRLKNEKDLQIKKKKNKYQKFSK
EEEEHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCEEHHHHHHHHHHCC
NNV
CCC
>Mature Secondary Structure 
SAKITVLATPIGNLKDISLRGIEALREAELILCEDSRVSRKLLNFLEIYDKKLISYHKF
CCEEEEEECCCCCCCCCHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCC
NENSVISKISPLIFSGKKVLLISDAGSPLVSDPGQFLINAHKNEIDVDFLPGPCAFVSAF
CCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEECCCCEEEEEECCCHHHHHHHH
VLSGFDSPLIFMGFFNSRKQQIIKQITIFKPNFSYIFYISPHKLINILEVIKEIYGDNIE
HHCCCCCCEEEEEHHCHHHHHHHHHHHEECCCCCEEEEECHHHHHHHHHHHHHHHCCCEE
IFLVKEMTKLHQKYFFGTPISIINQLKDSLKGEFTMVLRLKNEKDLQIKKKKNKYQKFSK
EEEEHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCEEHHHHHHHHHHCC
NNV
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA