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The map label for this gene is 54020344

Identifier: 54020344

GI number: 54020344

Start: 136829

End: 137791

Strand: Reverse

Name: 54020344

Synonym: mhp114

Alternate gene names: NA

Gene position: 137791-136829 (Counterclockwise)

Preceding gene: 54020345

Following gene: 54020343

Centisome position: 15.43

GC content: 29.39

Gene sequence:

>963_bases
ATGCAGATTAGTGTTGCAAAATATGTAGCTCAAAATACAATCATTCATAAAATGGACCCGCGGCTAAAAATTGCTTTTAA
CATCCTTTTTGCGGTACTTTTTTTTGTTACAAGTCATCTAATTACAATTTTAATCCTGCTTTTTGCAGCATTAGTATTTT
TTTATATTACTACCAAAAAAATAAAGCAAATTTTTACCTTGATGAAACTGCCTTTAATAATTTTTCTGATAATGATTATA
ATTTATGGATTTATTATTGACCAGAAAAATATTAACATAATTTTAGGGATAACCGCACCAGATAAAGCTCCACAATACCG
GGTTTTGGGTCTAAATGAACAACAGACAAATGATTTTATTTCCTGATATTTAGTAAAACCGACTGTTTTGTTTTCAAATC
TTAAGTTCTCAATTGGCACTGTTAGCATAATTCGCTCATTTGTTTTGGCGATTCGAATTTATGCAATGATAATTTCAACA
ACAATTCTGACCTATTCAACCAAACCATTTTTATTAACTAGGGCAATCGAGGACTTAATTCTGCCTTTAAAACTTTTATT
TATTCCCACACACATTATCGCAATGATTATTTCAATTGCAATCCGGTTTATTCCAACTTTGTTATTAGAAGCAACCCGAA
TTATGAAAGCACAGTCTTCACGCGGAGTTGATTTTAAACACGGAAAAATTAAAGATAAAGTTAAGTCATTAATTACCTTG
ATAATTCCACTTTTTGTATTAGCGTTTTCTCGGGCTGAAGATCTTTCAAATGCAATGGATGTAAGAAATTACGATGTTTA
TGCAAAAAGAAGTCGTTATCGCCGGCTAGTTTTTAATAAAATGGATTATTTATTTGCCCTAATTTTTATTAGTTTAATTA
TTTTAACAGTTTTAATGGAATTAAATATAATTCCAATTTCGCATCTGCCAAAATGATGATTATACACTAATCAAAAAATT
TAA

Upstream 100 bases:

>100_bases
TTTCGCGAAAAATTAATCAAAATTGGTTATCCAATTTCTAATGTTAGATCAGTATCTGAGTTAATCAGTGAAATTAATAT
GCTAATTCAAAAGGAAACAA

Downstream 100 bases:

>100_bases
ATTATGAAAAAAAACAGTCAAATTCGCGCGAAAATTATTGAACTAAGAGAAAAAATTGAAAAATGAAATCACCATTATTA
CCAATTACAGAACCCACTTG

Product: ABC transporter permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MQISVAKYVAQNTIIHKMDPRLKIAFNILFAVLFFVTSHLITILILLFAALVFFYITTKKIKQIFTLMKLPLIIFLIMII
IYGFIIDQKNINIILGITAPDKAPQYRVLGLNEQQTNDFISWYLVKPTVLFSNLKFSIGTVSIIRSFVLAIRIYAMIIST
TILTYSTKPFLLTRAIEDLILPLKLLFIPTHIIAMIISIAIRFIPTLLLEATRIMKAQSSRGVDFKHGKIKDKVKSLITL
IIPLFVLAFSRAEDLSNAMDVRNYDVYAKRSRYRRLVFNKMDYLFALIFISLIILTVLMELNIIPISHLPKWWLYTNQKI

Sequences:

>Translated_320_residues
MQISVAKYVAQNTIIHKMDPRLKIAFNILFAVLFFVTSHLITILILLFAALVFFYITTKKIKQIFTLMKLPLIIFLIMII
IYGFIIDQKNINIILGITAPDKAPQYRVLGLNEQQTNDFIS*YLVKPTVLFSNLKFSIGTVSIIRSFVLAIRIYAMIIST
TILTYSTKPFLLTRAIEDLILPLKLLFIPTHIIAMIISIAIRFIPTLLLEATRIMKAQSSRGVDFKHGKIKDKVKSLITL
IIPLFVLAFSRAEDLSNAMDVRNYDVYAKRSRYRRLVFNKMDYLFALIFISLIILTVLMELNIIPISHLPK**LYTNQKI
>Mature_320_residues
MQISVAKYVAQNTIIHKMDPRLKIAFNILFAVLFFVTSHLITILILLFAALVFFYITTKKIKQIFTLMKLPLIIFLIMII
IYGFIIDQKNINIILGITAPDKAPQYRVLGLNEQQTNDFIS*YLVKPTVLFSNLKFSIGTVSIIRSFVLAIRIYAMIIST
TILTYSTKPFLLTRAIEDLILPLKLLFIPTHIIAMIISIAIRFIPTLLLEATRIMKAQSSRGVDFKHGKIKDKVKSLITL
IIPLFVLAFSRAEDLSNAMDVRNYDVYAKRSRYRRLVFNKMDYLFALIFISLIILTVLMELNIIPISHLPK**LYTNQKI

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003339 [H]

Pfam domain/function: PF02361 CbiQ [H]

EC number: NA

Molecular weight: Translated: 36382; Mature: 36382

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQISVAKYVAQNTIIHKMDPRLKIAFNILFAVLFFVTSHLITILILLFAALVFFYITTKK
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKQIFTLMKLPLIIFLIMIIIYGFIIDQKNINIILGITAPDKAPQYRVLGLNEQQTNDFI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEECCCCHHHHHHH
SYLVKPTVLFSNLKFSIGTVSIIRSFVLAIRIYAMIISTTILTYSTKPFLLTRAIEDLIL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
PLKLLFIPTHIIAMIISIAIRFIPTLLLEATRIMKAQSSRGVDFKHGKIKDKVKSLITLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
IPLFVLAFSRAEDLSNAMDVRNYDVYAKRSRYRRLVFNKMDYLFALIFISLIILTVLMEL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NIIPISHLPKLYTNQKI
CCCCHHHCCHHHCCCCC
>Mature Secondary Structure
MQISVAKYVAQNTIIHKMDPRLKIAFNILFAVLFFVTSHLITILILLFAALVFFYITTKK
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKQIFTLMKLPLIIFLIMIIIYGFIIDQKNINIILGITAPDKAPQYRVLGLNEQQTNDFI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEECCCCHHHHHHH
SYLVKPTVLFSNLKFSIGTVSIIRSFVLAIRIYAMIISTTILTYSTKPFLLTRAIEDLIL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
PLKLLFIPTHIIAMIISIAIRFIPTLLLEATRIMKAQSSRGVDFKHGKIKDKVKSLITLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
IPLFVLAFSRAEDLSNAMDVRNYDVYAKRSRYRRLVFNKMDYLFALIFISLIILTVLMEL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NIIPISHLPKLYTNQKI
CCCCHHHCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8604303; 8948633 [H]