Definition | Mycoplasma hyopneumoniae 232, complete genome. |
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Accession | NC_006360 |
Length | 892,758 |
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The map label for this gene is 54020297
Identifier: 54020297
GI number: 54020297
Start: 859075
End: 860640
Strand: Direct
Name: 54020297
Synonym: mhp682
Alternate gene names: NA
Gene position: 859075-860640 (Clockwise)
Preceding gene: 54020296
Following gene: 54020298
Centisome position: 96.23
GC content: 29.63
Gene sequence:
>1566_bases ATGAAGTCTAAAAAAACAAAAAAATATATTTTCTTACTTTTGAATCCGCTTGCACTTCTTTTCCTATCAGCAAGCTGCTC GAATACGGCGCCTGCAACAACAAAAATTTCTAAAGACCAAAAAGAGGATAAAGGTACTATAAGAAAAGAAGTGGAAAATC CTAAAAAATCTGAGGAAAAACCAAGTACTGAAAAATCTGAAGTTAGCACTAAAAAATCTGAAAGCTCTGAAGAAAAAATT GAAGAAAATCCAAAAAATGAGGCCGTAGAAAAAAAAGATGAAATCGCTAAACAAAAAGATGAAATTTCTAAACCAAATGG TGAAAATCCGCAGCCTGAATTAGACAAACCCCAAGCTGAAGACGACCATCAAGTCGAAAAAATAGATGTCAAACCATTCA ATCCAAAAGAGGATCAAAAAGATGATGATATCAAATTAGCGCAACTAAAAGGCTATCTTTCCACCCTGCCTAACACTCTT TATATTACAACTTCACTCCAAAATGACCTTCCTTTGACAATTATTCATAGCGGAAAAGGCGAGAAAAAAGATTTAGGCTA TGTTAACTTTGTAAAACCAATTCAAGACTTTAATGATACTGAATACGAGGCAAAACTTGATTTTTCTGATGCACAACAAA AAGAAAACAAGACCAAAAATCCAATTGAAAATGTTGGTTTAGTGCTTAGTTTGAAAGACAATAAAAAAATCACTAGTTCA AAAAAAATTAGACTTTTATATACTGAAGAACAAGAAAATAAATCACATTTAAAGGCAAAAAGTTTACCGGAAAGTTTTAA ACATATTTTTCCTTCATTTTTAGCTTTTGCACTATTAAATAAAGAAAAAGAGGTAATTTCTCTGCCTTTTTTTAACGAAT CAGGTTATGTTTTAAACAATCAAAATTTTGGGGCGGGTCTTAAATCAATTTTTGCAGAATTTAACAACAGTGAAAATAAT AATCAAGAAAATAAATTTGGTTTTGATGTTGTCAGCGCACAGCCTGATGATGAAAAGGGGGAATTAAAACTAAATTTCCA ACTTTGAAAAATAAATGAAACTAACGGTGATCAAAAAGAAATTTTTCCTAAAATCGAAAGTTTAACTTTTTCAAACCTGG CAAAAAATTCAGATAATAATTACGAAATCAAACTTGATGAAGCAACTACAAATACAAATTTAAACAATGAAGATTTTGGG CTAAAAAACGCGGGTGAGAATCTAAATACATCTAAATTTAAGAAGAACGAATTCATAAAAAAAATAATAGATAATATACG GGTGAATATTAAAGCTGAAAATATTAATAACAAGTGACTCAAAGTTAGTGAAGCAAAATACAAAAATTGATTGATTTTTC CGCAAATTCAGTATGCAAATTTAGACTCAACAAAACTAATTAATAATTTAAAACTTGAAAAACAACAGGAAAACAAAATT TCTTGAACTTTGAACTTAGAATCCTACTTACTCGATAACAATCAAATTCTAACCCCAGACAGCGACTTTATTTTCGGAGA ACAAAAAAAAACAATTACAATCAAAGGCGAAATGCAATTAAGTTAA
Upstream 100 bases:
>100_bases AGGTAGTTTAAATCTTGATCAAGTCAAAAAAAATTAGTAAATTTAACCTTTATTTACTAATTTTTAATAATTTTACAAAA ATGATGTAAAATTATTAAAT
Downstream 100 bases:
>100_bases GTTTTGAAAGAACAAAGGGCTATTATTATACCACAAAGAAAAATTAAGGGAAGATTTTTTTATTTGTACTACCTCCTTTT TTAGTTTCGAGTGCGGACAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 521; Mature: 521
Protein sequence:
>521_residues MKSKKTKKYIFLLLNPLALLFLSASCSNTAPATTKISKDQKEDKGTIRKEVENPKKSEEKPSTEKSEVSTKKSESSEEKI EENPKNEAVEKKDEIAKQKDEISKPNGENPQPELDKPQAEDDHQVEKIDVKPFNPKEDQKDDDIKLAQLKGYLSTLPNTL YITTSLQNDLPLTIIHSGKGEKKDLGYVNFVKPIQDFNDTEYEAKLDFSDAQQKENKTKNPIENVGLVLSLKDNKKITSS KKIRLLYTEEQENKSHLKAKSLPESFKHIFPSFLAFALLNKEKEVISLPFFNESGYVLNNQNFGAGLKSIFAEFNNSENN NQENKFGFDVVSAQPDDEKGELKLNFQLWKINETNGDQKEIFPKIESLTFSNLAKNSDNNYEIKLDEATTNTNLNNEDFG LKNAGENLNTSKFKKNEFIKKIIDNIRVNIKAENINNKWLKVSEAKYKNWLIFPQIQYANLDSTKLINNLKLEKQQENKI SWTLNLESYLLDNNQILTPDSDFIFGEQKKTITIKGEMQLS
Sequences:
>Translated_521_residues MKSKKTKKYIFLLLNPLALLFLSASCSNTAPATTKISKDQKEDKGTIRKEVENPKKSEEKPSTEKSEVSTKKSESSEEKI EENPKNEAVEKKDEIAKQKDEISKPNGENPQPELDKPQAEDDHQVEKIDVKPFNPKEDQKDDDIKLAQLKGYLSTLPNTL YITTSLQNDLPLTIIHSGKGEKKDLGYVNFVKPIQDFNDTEYEAKLDFSDAQQKENKTKNPIENVGLVLSLKDNKKITSS KKIRLLYTEEQENKSHLKAKSLPESFKHIFPSFLAFALLNKEKEVISLPFFNESGYVLNNQNFGAGLKSIFAEFNNSENN NQENKFGFDVVSAQPDDEKGELKLNFQL*KINETNGDQKEIFPKIESLTFSNLAKNSDNNYEIKLDEATTNTNLNNEDFG LKNAGENLNTSKFKKNEFIKKIIDNIRVNIKAENINNK*LKVSEAKYKN*LIFPQIQYANLDSTKLINNLKLEKQQENKI S*TLNLESYLLDNNQILTPDSDFIFGEQKKTITIKGEMQLS >Mature_521_residues MKSKKTKKYIFLLLNPLALLFLSASCSNTAPATTKISKDQKEDKGTIRKEVENPKKSEEKPSTEKSEVSTKKSESSEEKI EENPKNEAVEKKDEIAKQKDEISKPNGENPQPELDKPQAEDDHQVEKIDVKPFNPKEDQKDDDIKLAQLKGYLSTLPNTL YITTSLQNDLPLTIIHSGKGEKKDLGYVNFVKPIQDFNDTEYEAKLDFSDAQQKENKTKNPIENVGLVLSLKDNKKITSS KKIRLLYTEEQENKSHLKAKSLPESFKHIFPSFLAFALLNKEKEVISLPFFNESGYVLNNQNFGAGLKSIFAEFNNSENN NQENKFGFDVVSAQPDDEKGELKLNFQL*KINETNGDQKEIFPKIESLTFSNLAKNSDNNYEIKLDEATTNTNLNNEDFG LKNAGENLNTSKFKKNEFIKKIIDNIRVNIKAENINNK*LKVSEAKYKN*LIFPQIQYANLDSTKLINNLKLEKQQENKI S*TLNLESYLLDNNQILTPDSDFIFGEQKKTITIKGEMQLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58809; Mature: 58809
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKKTKKYIFLLLNPLALLFLSASCSNTAPATTKISKDQKEDKGTIRKEVENPKKSEEK CCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCC PSTEKSEVSTKKSESSEEKIEENPKNEAVEKKDEIAKQKDEISKPNGENPQPELDKPQAE CCCCHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC DDHQVEKIDVKPFNPKEDQKDDDIKLAQLKGYLSTLPNTLYITTSLQNDLPLTIIHSGKG CCCCEEEEECCCCCCCCCCCCCCEEHHHHHHHHHHCCCEEEEEEECCCCCCEEEEECCCC EKKDLGYVNFVKPIQDFNDTEYEAKLDFSDAQQKENKTKNPIENVGLVLSLKDNKKITSS CCCCCCCHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCCCHHHCCEEEEECCCCCCCCC KKIRLLYTEEQENKSHLKAKSLPESFKHIFPSFLAFALLNKEKEVISLPFFNESGYVLNN CEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEC QNFGAGLKSIFAEFNNSENNNQENKFGFDVVSAQPDDEKGELKLNFQLKINETNGDQKEI CCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEECCCCCHHHH FPKIESLTFSNLAKNSDNNYEIKLDEATTNTNLNNEDFGLKNAGENLNTSKFKKNEFIKK HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH IIDNIRVNIKAENINNKLKVSEAKYKNLIFPQIQYANLDSTKLINNLKLEKQQENKISTL HHHCCEEEEEEECCCCEEEECHHHHHCCCCCCEEECCCCHHHHHHHCCCCHHHCCCCEEE NLESYLLDNNQILTPDSDFIFGEQKKTITIKGEMQLS EHHHEEECCCEEECCCCCEEECCCCEEEEEEEEEECC >Mature Secondary Structure MKSKKTKKYIFLLLNPLALLFLSASCSNTAPATTKISKDQKEDKGTIRKEVENPKKSEEK CCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCC PSTEKSEVSTKKSESSEEKIEENPKNEAVEKKDEIAKQKDEISKPNGENPQPELDKPQAE CCCCHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC DDHQVEKIDVKPFNPKEDQKDDDIKLAQLKGYLSTLPNTLYITTSLQNDLPLTIIHSGKG CCCCEEEEECCCCCCCCCCCCCCEEHHHHHHHHHHCCCEEEEEEECCCCCCEEEEECCCC EKKDLGYVNFVKPIQDFNDTEYEAKLDFSDAQQKENKTKNPIENVGLVLSLKDNKKITSS CCCCCCCHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCCCHHHCCEEEEECCCCCCCCC KKIRLLYTEEQENKSHLKAKSLPESFKHIFPSFLAFALLNKEKEVISLPFFNESGYVLNN CEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEC QNFGAGLKSIFAEFNNSENNNQENKFGFDVVSAQPDDEKGELKLNFQLKINETNGDQKEI CCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEECCCCCHHHH FPKIESLTFSNLAKNSDNNYEIKLDEATTNTNLNNEDFGLKNAGENLNTSKFKKNEFIKK HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH IIDNIRVNIKAENINNKLKVSEAKYKNLIFPQIQYANLDSTKLINNLKLEKQQENKISTL HHHCCEEEEEEECCCCEEEECHHHHHCCCCCCEEECCCCHHHHHHHCCCCHHHCCCCEEE NLESYLLDNNQILTPDSDFIFGEQKKTITIKGEMQLS EHHHEEECCCEEECCCCCEEECCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA