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The map label for this gene is scpB

Identifier: 54020286

GI number: 54020286

Start: 826326

End: 826913

Strand: Direct

Name: scpB

Synonym: mhp654

Alternate gene names: 54020286

Gene position: 826326-826913 (Clockwise)

Preceding gene: 54020285

Following gene: 54020287

Centisome position: 92.56

GC content: 35.71

Gene sequence:

>588_bases
ATGAAAACTAGAATTATTGAGGCAATTTTATATCTCCAAGGGGAAAAAGGAGTTTCATCACTCCAATTACAAAACTGTCT
AAAATTAGCAAAAATTAGTCAAGCGCGCAAACTTTTAAAGGACTTTGCCATTGAATTCAACCGGCAAAAACGCGGAATTT
TAGTGGTTGAATTTGATGATATTTTCAAATTCGTTACCGCAAAAGACCTAAAACCCTTTATAATTGATTTTGTCAGCAAT
GAAAGAAAATACCGCCTGAGCAATTCATCAATCGAGGTAGCAGCCATAATTGCATATAAACAACCAGTAACACGCAGCAC
AATCGCACAAATTCGGGGCGGGATTAATTCGGACTACATTGTCGGATCTTTATTAGCAAAGGGAATTATCGAAGAATTAG
GGACGGCTTCAACACCCGGAAATCCGACGCTTTATGGGGTAACTTCAAGGTTTTTTGATTATTTTAAACTAAGATCGGCA
AAAGATTTACCAAAATTTCAAGAATTTGATCTTTTTAGTCATGAAGACCAAAATTCACAGGTAGATAATTTTGATCTTTT
TTCATCCCAACGCGAAAACCAAAAATAG

Upstream 100 bases:

>100_bases
ATCACGATGATTTCTCTACTTGAAATGGCAAAAAAACAGGTGTTGCACTTAAAACAAGAAAGTCAATTTTCTGAAATTTT
AGTTTTTGAAGGAGGTTTTG

Downstream 100 bases:

>100_bases
TTCAATATGAAACTAGGTCAAATTAGTGCCAAAACTACTTTTGAAGAACAAAAATTTATTTTTTTTAATCAAGATTTTCC
GCTTGAGATAACTAATTCAA

Product: segregation and condensation protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MKTRIIEAILYLQGEKGVSSLQLQNCLKLAKISQARKLLKDFAIEFNRQKRGILVVEFDDIFKFVTAKDLKPFIIDFVSN
ERKYRLSNSSIEVAAIIAYKQPVTRSTIAQIRGGINSDYIVGSLLAKGIIEELGTASTPGNPTLYGVTSRFFDYFKLRSA
KDLPKFQEFDLFSHEDQNSQVDNFDLFSSQRENQK

Sequences:

>Translated_195_residues
MKTRIIEAILYLQGEKGVSSLQLQNCLKLAKISQARKLLKDFAIEFNRQKRGILVVEFDDIFKFVTAKDLKPFIIDFVSN
ERKYRLSNSSIEVAAIIAYKQPVTRSTIAQIRGGINSDYIVGSLLAKGIIEELGTASTPGNPTLYGVTSRFFDYFKLRSA
KDLPKFQEFDLFSHEDQNSQVDNFDLFSSQRENQK
>Mature_195_residues
MKTRIIEAILYLQGEKGVSSLQLQNCLKLAKISQARKLLKDFAIEFNRQKRGILVVEFDDIFKFVTAKDLKPFIIDFVSN
ERKYRLSNSSIEVAAIIAYKQPVTRSTIAQIRGGINSDYIVGSLLAKGIIEELGTASTPGNPTLYGVTSRFFDYFKLRSA
KDLPKFQEFDLFSHEDQNSQVDNFDLFSSQRENQK

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpA that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 22216; Mature: 22216

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRIIEAILYLQGEKGVSSLQLQNCLKLAKISQARKLLKDFAIEFNRQKRGILVVEFDD
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHH
IFKFVTAKDLKPFIIDFVSNERKYRLSNSSIEVAAIIAYKQPVTRSTIAQIRGGINSDYI
HHHHHHHCCCHHHHHHHHCCCCEEEECCCCEEEEEEEEECCCCHHHHHHHHHCCCCCHHH
VGSLLAKGIIEELGTASTPGNPTLYGVTSRFFDYFKLRSAKDLPKFQEFDLFSHEDQNSQ
HHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCC
VDNFDLFSSQRENQK
CCCHHHHHCCCCCCC
>Mature Secondary Structure
MKTRIIEAILYLQGEKGVSSLQLQNCLKLAKISQARKLLKDFAIEFNRQKRGILVVEFDD
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHH
IFKFVTAKDLKPFIIDFVSNERKYRLSNSSIEVAAIIAYKQPVTRSTIAQIRGGINSDYI
HHHHHHHCCCHHHHHHHHCCCCEEEECCCCEEEEEEEEECCCCHHHHHHHHHCCCCCHHH
VGSLLAKGIIEELGTASTPGNPTLYGVTSRFFDYFKLRSAKDLPKFQEFDLFSHEDQNSQ
HHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCC
VDNFDLFSSQRENQK
CCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA