Definition | Mycoplasma hyopneumoniae 232, complete genome. |
---|---|
Accession | NC_006360 |
Length | 892,758 |
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The map label for this gene is 54020276
Identifier: 54020276
GI number: 54020276
Start: 803140
End: 805638
Strand: Direct
Name: 54020276
Synonym: mhp639
Alternate gene names: NA
Gene position: 803140-805638 (Clockwise)
Preceding gene: 54020275
Following gene: 54020277
Centisome position: 89.96
GC content: 33.73
Gene sequence:
>2499_bases ATGCTGTTTTATTTATCGAAAAGAAAAAAAATTGTCCTTACCGGACTTACGGTTGCTGTAATTGCAGCCGGAATGAGTTT TTTTGCTAATCCCCAGTTTAGTAATTTTTTTCGCTTTAATTCACAGATTAGTTATAATTCCAAAGCTCCGTCAAGTGTTG CTAAAAACGATCCAAATGATCTAAGTTTTTATTCACCTGTAACAAATTCAGAATTTGACCCGCTTAAAAAAAGTCAGCCA AAAGCGGATCTAATCAAACCTCTTGAAGAAAAAAAAGAGGACATAAAACCTCAACAAATCCAAAAAGAAGAAATAAAACC AGAAGCTGAAAAAGAAAGTTTTGATCTAATTACTACCCCAAAAACACAAACAAACCAAAATCCAGAACAGACCCAAACTG AGACACCAAAACGCGTTGATGCCGAATATGGATATGTCACCCTTGATTGATCAGGCCTAAAAGTTAAAGCTTATGTCAAG AAAAAACCAAATCGCCAGTATTCAACTTATGATGTCCAAAATGGCTTAGCTAATCGCAAACCTTACCAGGCCCAAGTTGT TGATGAAGTTCTAAGTATTGAAGTTACCCCTGAAATTCGGGAAGCCAACAGAAAAAATGCAGCCGCTGCTCTTAAAAATT CCGTTCAAGGCTCAGCTTTTAGCATTTATGCTGATACAATCGCTCAAGGCGATGATAAAGTTGCGGCAGTTGTTGCCCAA AATTATGAAAATTATTATAAAAATATGTTTTTAAAATGGCGGGAATTATTTGAAAATGGCGATAAGGTAAGAGATTTTCT AACCCAAGAAGGTTATAATAAATATCCGGATATCAAAAGCAAATATGAATCTGATCTTGCCAAAGCCGAAATTGAAATCC GTAAAGCTGAAGCAGAAGTCCAAAAAATCTATAATGAAAGACCCCCAAGAACTGGATTTGATGGCTCAGGAAAAGAAACT TTTACCGAAGAAAATAAAATAAAACTACGTGATTGACAAGTAAAATATAATGAAGCAATCAAAAAACAAGAAGCAGCAAA ACAATTAAAAGAAGATGCAAAAAATACTAAATATGCCAAGTTAATTTATTATCTTGATTATTCTAAATTTGTTAAAAATT CAAAAGAAAATGATGACTATCTTTCAAAAGGATTTACAATCAATCCGGATAATTCCAATATTTCCGTTGATGCTGAAGGT ACACTAAGGTCAAATTCTTGATCACCTTTGATTAATCAAGTAACTTCAGTCTATAAAAAAGATAATGAAACCAGACGAGC TTTTGGTTATGGAAGTTATTGATGAAGATCTGGGGGCCAAATTCTTGATGGAACTTATGAAGGATGAACTAAAAAAGATA TTACTTCTTCGCAAGAATATGCAAAATATTCTGTATCTAAATCCGATGGAATCGAAATTGCCGAGCTGACAAAAAATGCT GATAATACTGCCCAAACTGCTCGCGATAAAGGGATAGTAATCACAATTGATTTTTCAAATGAATCAGGGTATAAAAAAAC AAAAAAACTAATCGAAGATCTTAAAAAAGATGGAAAACAAATCACCTCTTATCGTTTTTTTCATATTGGAAAAAACGATG CAAATCAGAAATTCAAGGATATTCTAGAAACTCTCCCGGAAAATTTACCCCAACTTGAACTTTTATTTGATAATACAAAT ACCTCCGCTCTTTTAGCTTTAGAAAATAAAAAAATTGATGAACTTTCAATTTATACCGAAGGAAATTCACTTTCTGATGA CTGAGCAATTAATCCTTGAGCCCTAAAAAACACGGCCTGATATAATACAAACGATTATAATGTTAGTTTTGATTATGCTC CAGGAGCTAAAGTTGCAACTAGAATTACTTTTAATTCTTTAGCTTTTGATGATAGTGACTATCAAGGAAATGGGGATTAT AAAAGGATAAATGATGGTCTAAGAATGGCTTACTGAACTAGAAATAATGAAAAAGTTTTCCAAGGGGGGATGGGTCCTGG CCTAAGTCCGGATATTAAAGAATCCGAGAATTCTTATCCAACCGGACTTGATCTTACAAGGGTCAAAAAAATGAAATCAC TTAAAGGTCTAATTTTCTCTGATCAGCAAAAATCTACAAATTCAAAACCAAGAAGGCTAACTCGAATTGGCCTTTATAAT GACTCAGAAAATTTTGAAATTCCAGTTGATGAACTAAATCATGCCCAGTTTGATGTCCTTGATACCCACCCGATGATGCG ACCAAAACCAAAAATTTTCTTTGCAAATAATTCAGCAACAAAACGGATTAAAGTTACAGGAAATGGTACTCTAACTTCTC AAGGGGCAACTAATCTCCGCATTCTTTTAGAAAATGGTCGACAAAAACATGATGATACAAAAATTTTTACTGATCAAAGA ATAATTGTCGACCCTAACAATTCTGCGCTTGCTGCTTCGCTTAGTTCAGCCGGATTTCAAGTTGATCAGTCAGCAACTTC GCAGATTAAATTTAATTAA
Upstream 100 bases:
>100_bases AAAATTAAAAAAATTTTTATGAATCTGTGGTAGAATTATATCTCAATATATAATATAAATAAGGAAAATTAAGCAGCTGA CAGAAAAAAAGGAGAAAATT
Downstream 100 bases:
>100_bases TTAGGTAATAATTATGAAAAAGAAGGCAAATTTTAAACTTTTACTAACAAAAAACTGGATAATTCCTAGTATTTTTTCAT TCCCTTTTTTGATCTCAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 832; Mature: 832
Protein sequence:
>832_residues MLFYLSKRKKIVLTGLTVAVIAAGMSFFANPQFSNFFRFNSQISYNSKAPSSVAKNDPNDLSFYSPVTNSEFDPLKKSQP KADLIKPLEEKKEDIKPQQIQKEEIKPEAEKESFDLITTPKTQTNQNPEQTQTETPKRVDAEYGYVTLDWSGLKVKAYVK KKPNRQYSTYDVQNGLANRKPYQAQVVDEVLSIEVTPEIREANRKNAAAALKNSVQGSAFSIYADTIAQGDDKVAAVVAQ NYENYYKNMFLKWRELFENGDKVRDFLTQEGYNKYPDIKSKYESDLAKAEIEIRKAEAEVQKIYNERPPRTGFDGSGKET FTEENKIKLRDWQVKYNEAIKKQEAAKQLKEDAKNTKYAKLIYYLDYSKFVKNSKENDDYLSKGFTINPDNSNISVDAEG TLRSNSWSPLINQVTSVYKKDNETRRAFGYGSYWWRSGGQILDGTYEGWTKKDITSSQEYAKYSVSKSDGIEIAELTKNA DNTAQTARDKGIVITIDFSNESGYKKTKKLIEDLKKDGKQITSYRFFHIGKNDANQKFKDILETLPENLPQLELLFDNTN TSALLALENKKIDELSIYTEGNSLSDDWAINPWALKNTAWYNTNDYNVSFDYAPGAKVATRITFNSLAFDDSDYQGNGDY KRINDGLRMAYWTRNNEKVFQGGMGPGLSPDIKESENSYPTGLDLTRVKKMKSLKGLIFSDQQKSTNSKPRRLTRIGLYN DSENFEIPVDELNHAQFDVLDTHPMMRPKPKIFFANNSATKRIKVTGNGTLTSQGATNLRILLENGRQKHDDTKIFTDQR IIVDPNNSALAASLSSAGFQVDQSATSQIKFN
Sequences:
>Translated_832_residues MLFYLSKRKKIVLTGLTVAVIAAGMSFFANPQFSNFFRFNSQISYNSKAPSSVAKNDPNDLSFYSPVTNSEFDPLKKSQP KADLIKPLEEKKEDIKPQQIQKEEIKPEAEKESFDLITTPKTQTNQNPEQTQTETPKRVDAEYGYVTLD*SGLKVKAYVK KKPNRQYSTYDVQNGLANRKPYQAQVVDEVLSIEVTPEIREANRKNAAAALKNSVQGSAFSIYADTIAQGDDKVAAVVAQ NYENYYKNMFLKWRELFENGDKVRDFLTQEGYNKYPDIKSKYESDLAKAEIEIRKAEAEVQKIYNERPPRTGFDGSGKET FTEENKIKLRD*QVKYNEAIKKQEAAKQLKEDAKNTKYAKLIYYLDYSKFVKNSKENDDYLSKGFTINPDNSNISVDAEG TLRSNS*SPLINQVTSVYKKDNETRRAFGYGSY**RSGGQILDGTYEG*TKKDITSSQEYAKYSVSKSDGIEIAELTKNA DNTAQTARDKGIVITIDFSNESGYKKTKKLIEDLKKDGKQITSYRFFHIGKNDANQKFKDILETLPENLPQLELLFDNTN TSALLALENKKIDELSIYTEGNSLSDD*AINP*ALKNTA*YNTNDYNVSFDYAPGAKVATRITFNSLAFDDSDYQGNGDY KRINDGLRMAY*TRNNEKVFQGGMGPGLSPDIKESENSYPTGLDLTRVKKMKSLKGLIFSDQQKSTNSKPRRLTRIGLYN DSENFEIPVDELNHAQFDVLDTHPMMRPKPKIFFANNSATKRIKVTGNGTLTSQGATNLRILLENGRQKHDDTKIFTDQR IIVDPNNSALAASLSSAGFQVDQSATSQIKFN >Mature_832_residues MLFYLSKRKKIVLTGLTVAVIAAGMSFFANPQFSNFFRFNSQISYNSKAPSSVAKNDPNDLSFYSPVTNSEFDPLKKSQP KADLIKPLEEKKEDIKPQQIQKEEIKPEAEKESFDLITTPKTQTNQNPEQTQTETPKRVDAEYGYVTLD*SGLKVKAYVK KKPNRQYSTYDVQNGLANRKPYQAQVVDEVLSIEVTPEIREANRKNAAAALKNSVQGSAFSIYADTIAQGDDKVAAVVAQ NYENYYKNMFLKWRELFENGDKVRDFLTQEGYNKYPDIKSKYESDLAKAEIEIRKAEAEVQKIYNERPPRTGFDGSGKET FTEENKIKLRD*QVKYNEAIKKQEAAKQLKEDAKNTKYAKLIYYLDYSKFVKNSKENDDYLSKGFTINPDNSNISVDAEG TLRSNS*SPLINQVTSVYKKDNETRRAFGYGSY**RSGGQILDGTYEG*TKKDITSSQEYAKYSVSKSDGIEIAELTKNA DNTAQTARDKGIVITIDFSNESGYKKTKKLIEDLKKDGKQITSYRFFHIGKNDANQKFKDILETLPENLPQLELLFDNTN TSALLALENKKIDELSIYTEGNSLSDD*AINP*ALKNTA*YNTNDYNVSFDYAPGAKVATRITFNSLAFDDSDYQGNGDY KRINDGLRMAY*TRNNEKVFQGGMGPGLSPDIKESENSYPTGLDLTRVKKMKSLKGLIFSDQQKSTNSKPRRLTRIGLYN DSENFEIPVDELNHAQFDVLDTHPMMRPKPKIFFANNSATKRIKVTGNGTLTSQGATNLRILLENGRQKHDDTKIFTDQR IIVDPNNSALAASLSSAGFQVDQSATSQIKFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To U.parvum UU046 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92534; Mature: 92534
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFYLSKRKKIVLTGLTVAVIAAGMSFFANPQFSNFFRFNSQISYNSKAPSSVAKNDPND CEEEECCCCEEEEEHHHHHHHHHHHHHHCCCCCCHHEEECCEEEECCCCCCHHHCCCCCC LSFYSPVTNSEFDPLKKSQPKADLIKPLEEKKEDIKPQQIQKEEIKPEAEKESFDLITTP CEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCEEECC KTQTNQNPEQTQTETPKRVDAEYGYVTLDSGLKVKAYVKKKPNRQYSTYDVQNGLANRKP CCCCCCCCHHHHCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCEEEHHCCCCCCCC YQAQVVDEVLSIEVTPEIREANRKNAAAALKNSVQGSAFSIYADTIAQGDDKVAAVVAQN CHHHHHHHHHEEECCCHHHHCCCHHHHHHHHHCCCCCEEEEEEHHHHCCCCHHHHHHHHH YENYYKNMFLKWRELFENGDKVRDFLTQEGYNKYPDIKSKYESDLAKAEIEIRKAEAEVQ HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KIYNERPPRTGFDGSGKETFTEENKIKLRDQVKYNEAIKKQEAAKQLKEDAKNTKYAKLI HHHHCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE YYLDYSKFVKNSKENDDYLSKGFTINPDNSNISVDAEGTLRSNSSPLINQVTSVYKKDNE EEECHHHHHCCCCCCCHHHHCCCEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCC TRRAFGYGSYRSGGQILDGTYEGTKKDITSSQEYAKYSVSKSDGIEIAELTKNADNTAQT HHHHCCCCCCCCCCEEEECCCCCCHHHCCCCHHHHHEECCCCCCCCHHHHHCCCCHHHHH ARDKGIVITIDFSNESGYKKTKKLIEDLKKDGKQITSYRFFHIGKNDANQKFKDILETLP HCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCHHEEEEEEEEECCCCCHHHHHHHHHHHH ENLPQLELLFDNTNTSALLALENKKIDELSIYTEGNSLSDDAINPALKNTAYNTNDYNVS CCCCCEEEEEECCCCEEEEEECCCCCCEEEEEECCCCCCCHHCCHHHHCCCCCCCCCEEE FDYAPGAKVATRITFNSLAFDDSDYQGNGDYKRINDGLRMAYTRNNEKVFQGGMGPGLSP EECCCCCCEEEEEEEHHEEECCCCCCCCCCHHHHCCCEEEEEECCCCEEEECCCCCCCCC DIKESENSYPTGLDLTRVKKMKSLKGLIFSDQQKSTNSKPRRLTRIGLYNDSENFEIPVD CCCCCCCCCCCCCCHHHHHHHHHHHCCEECCCCCCCCCCCCEEEEEEEECCCCCCEECHH ELNHAQFDVLDTHPMMRPKPKIFFANNSATKRIKVTGNGTLTSQGATNLRILLENGRQKH HCCCCEEEEECCCCCCCCCCCEEEECCCCCEEEEEECCCEEECCCCCEEEEEEECCCCCC DDTKIFTDQRIIVDPNNSALAASLSSAGFQVDQSATSQIKFN CCCEEEECCEEEECCCCCEEEEEHHHCCCEECCCCCCCEECC >Mature Secondary Structure MLFYLSKRKKIVLTGLTVAVIAAGMSFFANPQFSNFFRFNSQISYNSKAPSSVAKNDPND CEEEECCCCEEEEEHHHHHHHHHHHHHHCCCCCCHHEEECCEEEECCCCCCHHHCCCCCC LSFYSPVTNSEFDPLKKSQPKADLIKPLEEKKEDIKPQQIQKEEIKPEAEKESFDLITTP CEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCEEECC KTQTNQNPEQTQTETPKRVDAEYGYVTLDSGLKVKAYVKKKPNRQYSTYDVQNGLANRKP CCCCCCCCHHHHCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCEEEHHCCCCCCCC YQAQVVDEVLSIEVTPEIREANRKNAAAALKNSVQGSAFSIYADTIAQGDDKVAAVVAQN CHHHHHHHHHEEECCCHHHHCCCHHHHHHHHHCCCCCEEEEEEHHHHCCCCHHHHHHHHH YENYYKNMFLKWRELFENGDKVRDFLTQEGYNKYPDIKSKYESDLAKAEIEIRKAEAEVQ HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KIYNERPPRTGFDGSGKETFTEENKIKLRDQVKYNEAIKKQEAAKQLKEDAKNTKYAKLI HHHHCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE YYLDYSKFVKNSKENDDYLSKGFTINPDNSNISVDAEGTLRSNSSPLINQVTSVYKKDNE EEECHHHHHCCCCCCCHHHHCCCEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCC TRRAFGYGSYRSGGQILDGTYEGTKKDITSSQEYAKYSVSKSDGIEIAELTKNADNTAQT HHHHCCCCCCCCCCEEEECCCCCCHHHCCCCHHHHHEECCCCCCCCHHHHHCCCCHHHHH ARDKGIVITIDFSNESGYKKTKKLIEDLKKDGKQITSYRFFHIGKNDANQKFKDILETLP HCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCHHEEEEEEEEECCCCCHHHHHHHHHHHH ENLPQLELLFDNTNTSALLALENKKIDELSIYTEGNSLSDDAINPALKNTAYNTNDYNVS CCCCCEEEEEECCCCEEEEEECCCCCCEEEEEECCCCCCCHHCCHHHHCCCCCCCCCEEE FDYAPGAKVATRITFNSLAFDDSDYQGNGDYKRINDGLRMAYTRNNEKVFQGGMGPGLSP EECCCCCCEEEEEEEHHEEECCCCCCCCCCHHHHCCCEEEEEECCCCEEEECCCCCCCCC DIKESENSYPTGLDLTRVKKMKSLKGLIFSDQQKSTNSKPRRLTRIGLYNDSENFEIPVD CCCCCCCCCCCCCCHHHHHHHHHHHCCEECCCCCCCCCCCCEEEEEEEECCCCCCEECHH ELNHAQFDVLDTHPMMRPKPKIFFANNSATKRIKVTGNGTLTSQGATNLRILLENGRQKH HCCCCEEEEECCCCCCCCCCCEEEECCCCCEEEEEECCCEEECCCCCEEEEEEECCCCCC DDTKIFTDQRIIVDPNNSALAASLSSAGFQVDQSATSQIKFN CCCEEEECCEEEECCCCCEEEEEHHHCCCEECCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11048724 [H]