Definition | Mycoplasma hyopneumoniae 232, complete genome. |
---|---|
Accession | NC_006360 |
Length | 892,758 |
Click here to switch to the map view.
The map label for this gene is 54020244
Identifier: 54020244
GI number: 54020244
Start: 700063
End: 701412
Strand: Direct
Name: 54020244
Synonym: mhp553
Alternate gene names: NA
Gene position: 700063-701412 (Clockwise)
Preceding gene: 54020243
Following gene: 54020245
Centisome position: 78.42
GC content: 27.7
Gene sequence:
>1350_bases ATGAAAAAAATTTTTAGGCTTTTAGGAGGTTTAGGTATTGTAATTTCAAGTCCTTTTTTCATTTTTAGTCAAAAAGGACA GATTATTTCTAACCCTATAGAGCTTAATTTTAATTTTCAAGAATTAGCTAATAAATTAAATTTCGATCGAAAATTAAACA GGTTATACCGAAATGTCAAAGTCGGAGTTTTAATTGAAGAAAATGGCGATAAAAATAATATTGACTATAATAATTTACAA GCAATTTTTGAATTTTTCTCGCCAAGTTCCGAACTTGTTATCTATCGTTTTAAAACAAAAGAACAATGACTTGAAGGAAT TAAACATTTTGAAACTGTCGGTATTGAAATGCTTATTCATCTATACAAAAAAGAAAGAACTTTTTTAGATGATTTATTTT GAAAAAACGGCGAATACATCAGATTAGGTGATTTTCTTGATCTTTGAAGTGCAAAAACCGGAATTATAAACTTTTTTGAT GGCAGCAGACCGCCAGGAAATGAAGTTAATAGTCATTTTAGTTTTTTTGCTAAAACTGATGACCGTTTTAAGACAAATAA TCAAATGCTATCACATACAAAAATTTTTGGCAATGGTTTAGGAATTATAAAATCAAATCATTTTGTTTTCCCAGAACTAA AATATAATTATCAACTAAATCCGCATTCTTCAAATATGGAATTTTATTCTGCTTTTTTATTAGCAGCGCTTTTTAGTCAA CTTTCATCAAGTTTTGATAGTTATGAAAGTCTAAAAGATCGAAATTTAAAAATTATTACTGCTCTAGCATTAACTGCGAA TCCATCAGAGAATAGCAATTTAGCCTTTAATGGCACTCATTTAAATGAAGGTTTTGGATTTATAAATTATACTGACGCCC ATTTTACAATCCAACAACAAAATTATTTATATAATAAATATGATGGAAATGAATATACAACAAGTCCTTTTGAATTAGTA AAGAATCAAAAATTTTCAGCGATAGTTTTTTCTGATAAATTCACCGAAAGACTGATTTTTGGAGAATATTTGCCAGGATT TTCGGGCATTTTTCACAATTTTCAAAAAAATATCAAATTAATTACTAATGCATCTTTTTACGGTCTTCCTGAATTTAAAG TAAATGATTTTGATATTTCCATTGAAATTTTCCGCGGTGGTTGGCATAAAATAATTGAGGCAAATTCAACTATCAGTCCG TATGATAAAATCAGTTTTAAAGCTTTTGAAGATGGACAATACCGAATAAAAATTTCAAGTCAAAAATTTTTGCCTGACAA ACAAAGCAAATATTTTATTGCCTGAAGAAGATATCCTTCTGATTTTGTAACAAAAACACACTGAAATTAA
Upstream 100 bases:
>100_bases AGGAAAATTTTAGGAAAAAGTTGCAGATTTTATTTTTTTTGACTAAAAAGACTAAAAAAAATTAAATATAAGTGAGAAAT AAGGAAAAAGGAAGTTAGAA
Downstream 100 bases:
>100_bases AACATTTTTTACCATTTTGTATTAAAATGTTTTATATTATGAATCTTTTTGTTGATACAACAGGTAAATTTTTAGTGGTT GCGATTTTTGATAAAAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 449; Mature: 449
Protein sequence:
>449_residues MKKIFRLLGGLGIVISSPFFIFSQKGQIISNPIELNFNFQELANKLNFDRKLNRLYRNVKVGVLIEENGDKNNIDYNNLQ AIFEFFSPSSELVIYRFKTKEQWLEGIKHFETVGIEMLIHLYKKERTFLDDLFWKNGEYIRLGDFLDLWSAKTGIINFFD GSRPPGNEVNSHFSFFAKTDDRFKTNNQMLSHTKIFGNGLGIIKSNHFVFPELKYNYQLNPHSSNMEFYSAFLLAALFSQ LSSSFDSYESLKDRNLKIITALALTANPSENSNLAFNGTHLNEGFGFINYTDAHFTIQQQNYLYNKYDGNEYTTSPFELV KNQKFSAIVFSDKFTERLIFGEYLPGFSGIFHNFQKNIKLITNASFYGLPEFKVNDFDISIEIFRGGWHKIIEANSTISP YDKISFKAFEDGQYRIKISSQKFLPDKQSKYFIAWRRYPSDFVTKTHWN
Sequences:
>Translated_449_residues MKKIFRLLGGLGIVISSPFFIFSQKGQIISNPIELNFNFQELANKLNFDRKLNRLYRNVKVGVLIEENGDKNNIDYNNLQ AIFEFFSPSSELVIYRFKTKEQ*LEGIKHFETVGIEMLIHLYKKERTFLDDLF*KNGEYIRLGDFLDL*SAKTGIINFFD GSRPPGNEVNSHFSFFAKTDDRFKTNNQMLSHTKIFGNGLGIIKSNHFVFPELKYNYQLNPHSSNMEFYSAFLLAALFSQ LSSSFDSYESLKDRNLKIITALALTANPSENSNLAFNGTHLNEGFGFINYTDAHFTIQQQNYLYNKYDGNEYTTSPFELV KNQKFSAIVFSDKFTERLIFGEYLPGFSGIFHNFQKNIKLITNASFYGLPEFKVNDFDISIEIFRGGWHKIIEANSTISP YDKISFKAFEDGQYRIKISSQKFLPDKQSKYFIA*RRYPSDFVTKTH*N >Mature_449_residues MKKIFRLLGGLGIVISSPFFIFSQKGQIISNPIELNFNFQELANKLNFDRKLNRLYRNVKVGVLIEENGDKNNIDYNNLQ AIFEFFSPSSELVIYRFKTKEQ*LEGIKHFETVGIEMLIHLYKKERTFLDDLF*KNGEYIRLGDFLDL*SAKTGIINFFD GSRPPGNEVNSHFSFFAKTDDRFKTNNQMLSHTKIFGNGLGIIKSNHFVFPELKYNYQLNPHSSNMEFYSAFLLAALFSQ LSSSFDSYESLKDRNLKIITALALTANPSENSNLAFNGTHLNEGFGFINYTDAHFTIQQQNYLYNKYDGNEYTTSPFELV KNQKFSAIVFSDKFTERLIFGEYLPGFSGIFHNFQKNIKLITNASFYGLPEFKVNDFDISIEIFRGGWHKIIEANSTISP YDKISFKAFEDGQYRIKISSQKFLPDKQSKYFIA*RRYPSDFVTKTH*N
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51349; Mature: 51349
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIFRLLGGLGIVISSPFFIFSQKGQIISNPIELNFNFQELANKLNFDRKLNRLYRNVK CHHHHHHHCCCEEECCCCEEEEECCCCEECCCEEEEECHHHHHHHCCHHHHHHHHHHCEE VGVLIEENGDKNNIDYNNLQAIFEFFSPSSELVIYRFKTKEQLEGIKHFETVGIEMLIHL EEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH YKKERTFLDDLFKNGEYIRLGDFLDLSAKTGIINFFDGSRPPGNEVNSHFSFFAKTDDRF HHHHHHHHHHHHCCCCEEEECCEEECCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCC KTNNQMLSHTKIFGNGLGIIKSNHFVFPELKYNYQLNPHSSNMEFYSAFLLAALFSQLSS CCCCCHHHHEEEECCCEEEEECCCEEECEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH SFDSYESLKDRNLKIITALALTANPSENSNLAFNGTHLNEGFGFINYTDAHFTIQQQNYL HHHHHHHHHCCCEEEEEEEEEECCCCCCCCEEEECCEECCCCCEEEEECCEEEEECCCCE YNKYDGNEYTTSPFELVKNQKFSAIVFSDKFTERLIFGEYLPGFSGIFHNFQKNIKLITN EEEECCCCCCCCHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHCCEEEEEC ASFYGLPEFKVNDFDISIEIFRGGWHKIIEANSTISPYDKISFKAFEDGQYRIKISSQKF CCCCCCCCCEECCEEEEEEEEECCCEEEEECCCCCCCCCCEEEEEEECCEEEEEECCCCC LPDKQSKYFIARRYPSDFVTKTHN CCCCCCCEEEEEECCCHHHCCCCC >Mature Secondary Structure MKKIFRLLGGLGIVISSPFFIFSQKGQIISNPIELNFNFQELANKLNFDRKLNRLYRNVK CHHHHHHHCCCEEECCCCEEEEECCCCEECCCEEEEECHHHHHHHCCHHHHHHHHHHCEE VGVLIEENGDKNNIDYNNLQAIFEFFSPSSELVIYRFKTKEQLEGIKHFETVGIEMLIHL EEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH YKKERTFLDDLFKNGEYIRLGDFLDLSAKTGIINFFDGSRPPGNEVNSHFSFFAKTDDRF HHHHHHHHHHHHCCCCEEEECCEEECCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCC KTNNQMLSHTKIFGNGLGIIKSNHFVFPELKYNYQLNPHSSNMEFYSAFLLAALFSQLSS CCCCCHHHHEEEECCCEEEEECCCEEECEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH SFDSYESLKDRNLKIITALALTANPSENSNLAFNGTHLNEGFGFINYTDAHFTIQQQNYL HHHHHHHHHCCCEEEEEEEEEECCCCCCCCEEEECCEECCCCCEEEEECCEEEEECCCCE YNKYDGNEYTTSPFELVKNQKFSAIVFSDKFTERLIFGEYLPGFSGIFHNFQKNIKLITN EEEECCCCCCCCHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHCCEEEEEC ASFYGLPEFKVNDFDISIEIFRGGWHKIIEANSTISPYDKISFKAFEDGQYRIKISSQKF CCCCCCCCCEECCEEEEEEEEECCCEEEEECCCCCCCCCCEEEEEEECCEEEEEECCCCC LPDKQSKYFIARRYPSDFVTKTHN CCCCCCCEEEEEECCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA