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The map label for this gene is ldh

Identifier: 54020211

GI number: 54020211

Start: 581688

End: 582602

Strand: Direct

Name: ldh

Synonym: mhp469

Alternate gene names: 54020211

Gene position: 581688-582602 (Clockwise)

Preceding gene: 54020210

Following gene: 54020212

Centisome position: 65.16

GC content: 23.39

Gene sequence:

>915_bases
ATGATAATTGGCTTTATCGGGATAACAAATACGAGTATAAATTTAATTTCTAACCTAATTTTGACAAGAAATGAGGTGGA
ATTCTTAATAATAGATAATAATTTTTTACGTCTAAATCAAATAATTGAAGAATTTAATAGTATTATCGACTATGGAAGAC
ATAAGAATAAAATTAATTTCACAAATTATCAAAATTTGGAAAAAGCTGATATTTTAATTATTGAACCAAAGCAAAATCAA
GCGCCAGGAATGAATTTAACTGATCAGGCAATCGAAAATGCTGAATGAATTTATAAAACTGGATTTTTAGTACGGAATTC
AAATTTTAACGGAATTACTTTTATTTTAGGTTATTATAATTCGATTTTGTGTAAAATTTTTAGTTCCACATCTGGACTTG
TAGGGAAAAAAGTCTTTGGAATTGGCACTATTTTAGAAAATATTTATTTTAATATGCTTTTAAAAAAAACAAATTCTGAT
CTAGCAAAAACTGCTAATCTTCTTATCCTTGGAGATCAAGGAAATAGTTTTTTAATCAATCAAGATTTTAAAAATAATGA
AATAACAGATAAAAATAATGAAATATTTGATAAACTTATTCAGAAAATAAATGAAAAAAGTTTAGAAAAAATTATTAGAA
AAACGGCAGAAAATTGACTGTTAGCATCAATTTTACTAGATATTTTACTAGATATTTTTCAGCAAAAACAAAGTTTTTTC
CTAATAAATTCTTGAGTTGAATCATTTTATAATATAAAAAATGATTTTTTCACAATTCCTGTCAAAATCGATCTATCAGG
TCAAATTGAAACTAAAAATATTAACCTAAATAAGCAGGATCAGCAAAAATTAATTCAATTTATGTGAAAAAAAGATGAAC
TAAACACGCTTATTGACAAATATTTATTAAAATAA

Upstream 100 bases:

>100_bases
CGGAAAACCACTTTTAAAAAAATAAAATTAATATCTAAAAGTGAAATTATAACATAAATTATCAAAAAGTTACTGTTTTT
TATTTTTAAGGAAAAAATTT

Downstream 100 bases:

>100_bases
GATAAAAATTTTATTATTTTTTGATATAATTTTTTTTAGTAAATAGTTTTTGTGTTTAAAACTGGAAGGAAAAGATGGCA
AAACTTAATTCTTATAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: L-LDH 2 [H]

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MIIGFIGITNTSINLISNLILTRNEVEFLIIDNNFLRLNQIIEEFNSIIDYGRHKNKINFTNYQNLEKADILIIEPKQNQ
APGMNLTDQAIENAEWIYKTGFLVRNSNFNGITFILGYYNSILCKIFSSTSGLVGKKVFGIGTILENIYFNMLLKKTNSD
LAKTANLLILGDQGNSFLINQDFKNNEITDKNNEIFDKLIQKINEKSLEKIIRKTAENWLLASILLDILLDIFQQKQSFF
LINSWVESFYNIKNDFFTIPVKIDLSGQIETKNINLNKQDQQKLIQFMWKKDELNTLIDKYLLK

Sequences:

>Translated_304_residues
MIIGFIGITNTSINLISNLILTRNEVEFLIIDNNFLRLNQIIEEFNSIIDYGRHKNKINFTNYQNLEKADILIIEPKQNQ
APGMNLTDQAIENAE*IYKTGFLVRNSNFNGITFILGYYNSILCKIFSSTSGLVGKKVFGIGTILENIYFNMLLKKTNSD
LAKTANLLILGDQGNSFLINQDFKNNEITDKNNEIFDKLIQKINEKSLEKIIRKTAEN*LLASILLDILLDIFQQKQSFF
LINS*VESFYNIKNDFFTIPVKIDLSGQIETKNINLNKQDQQKLIQFM*KKDELNTLIDKYLLK
>Mature_304_residues
MIIGFIGITNTSINLISNLILTRNEVEFLIIDNNFLRLNQIIEEFNSIIDYGRHKNKINFTNYQNLEKADILIIEPKQNQ
APGMNLTDQAIENAE*IYKTGFLVRNSNFNGITFILGYYNSILCKIFSSTSGLVGKKVFGIGTILENIYFNMLLKKTNSD
LAKTANLLILGDQGNSFLINQDFKNNEITDKNNEIFDKLIQKINEKSLEKIIRKTAEN*LLASILLDILLDIFQQKQSFF
LINS*VESFYNIKNDFFTIPVKIDLSGQIETKNINLNKQDQQKLIQFM*KKDELNTLIDKYLLK

Specific function: Unknown

COG id: COG0039

COG function: function code C; Malate/lactate dehydrogenases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LDH/MDH superfamily. LDH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001557
- InterPro:   IPR011304
- InterPro:   IPR018177
- InterPro:   IPR022383
- InterPro:   IPR001236
- InterPro:   IPR015955
- InterPro:   IPR016040 [H]

Pfam domain/function: PF02866 Ldh_1_C; PF00056 Ldh_1_N [H]

EC number: =1.1.1.27 [H]

Molecular weight: Translated: 34443; Mature: 34443

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIGFIGITNTSINLISNLILTRNEVEFLIIDNNFLRLNQIIEEFNSIIDYGRHKNKINF
CEEEEEEECCCHHHHHHHHHEECCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCC
TNYQNLEKADILIIEPKQNQAPGMNLTDQAIENAEIYKTGFLVRNSNFNGITFILGYYNS
CCCCCCCCCCEEEECCCCCCCCCCCCHHHHHCCCCEEEEEEEEECCCCCCEEEHHHHHHH
ILCKIFSSTSGLVGKKVFGIGTILENIYFNMLLKKTNSDLAKTANLLILGDQGNSFLINQ
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEEEECCCCEEEEEC
DFKNNEITDKNNEIFDKLIQKINEKSLEKIIRKTAENLLASILLDILLDIFQQKQSFFLI
CCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEH
NSVESFYNIKNDFFTIPVKIDLSGQIETKNINLNKQDQQKLIQFMKKDELNTLIDKYLLK
HHHHHHHCCCCCEEEEEEEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIIGFIGITNTSINLISNLILTRNEVEFLIIDNNFLRLNQIIEEFNSIIDYGRHKNKINF
CEEEEEEECCCHHHHHHHHHEECCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCC
TNYQNLEKADILIIEPKQNQAPGMNLTDQAIENAEIYKTGFLVRNSNFNGITFILGYYNS
CCCCCCCCCCEEEECCCCCCCCCCCCHHHHHCCCCEEEEEEEEECCCCCCEEEHHHHHHH
ILCKIFSSTSGLVGKKVFGIGTILENIYFNMLLKKTNSDLAKTANLLILGDQGNSFLINQ
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEEEECCCCEEEEEC
DFKNNEITDKNNEIFDKLIQKINEKSLEKIIRKTAENLLASILLDILLDIFQQKQSFFLI
CCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEH
NSVESFYNIKNDFFTIPVKIDLSGQIETKNINLNKQDQQKLIQFMKKDELNTLIDKYLLK
HHHHHHHCCCCCEEEEEEEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629 [H]