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The map label for this gene is gtsA

Identifier: 54020175

GI number: 54020175

Start: 469575

End: 470762

Strand: Direct

Name: gtsA

Synonym: mhp391

Alternate gene names: 54020175

Gene position: 469575-470762 (Clockwise)

Preceding gene: 54020174

Following gene: 54020176

Centisome position: 52.6

GC content: 25.59

Gene sequence:

>1188_bases
TTGCAAAAAAAAGGTAAAATTTTCATTATGGAAAGTCAAAACAGTGCGATTAAGATTAAAAATTTAATTTTCTCTTATGA
TAAAAAAGAGTTTTTAGAAATCAATAATCTTGAGATTCCAGCTAAAAAAATTACTACAATTTTAGGGCCTTCAGGGTCAG
GAAAATCGACTTTTTTAAATTTATTAGCGGGATTTTTACCTTCAAAAGCAGCAATTGAATATAGCCCGGAATTTGAACAT
TTTGGCTATATAATGCAGAAAAACAATCTTTATGAAGAAATAAGTGTTAAAAAAAACCTATGGATTAGTACAAAGAACTC
TTTAAAATGAAGGAAAAAAGTCTGATTATTAAGTCTTAGGGAATTTGCCAAAATCAAAAATTTACCTGATTTTGGCAAGA
ATTTAACAAATTTTTTTATAGAAAAATCAGATTCATTTTGAAAAAAAATTGCACAAAAAGTAAATTTTTATATTTTTATC
ATAAAAAATGTAAAATTTTATTATTTTTATATTAAATTTTGCAAAAAACAATTTGAAATTGAAATTAAAAAAATTTTAAA
AATTCTGGAAATTGAAGATATTTTTGAAAAAAAAGCCGCAAAAATCAGCGGCGGCCAGGAACAAAGGGTCGCTTTTGCCA
AGTCAATTATAAAAGGTGATAATATGGTTTTAATGGATGAACCTTTTTCTTCCCTTGATACAAAAATAAAGGAGGCAACT
ATCAAATTATTACTTAAAATCAAGGATGAATTTAAAATGACAATCATTTTAGTAACTCATGATCAAAATGATGCAATGAA
GATTAGTGATAAAATTATCCTTTTAAATAAAGGCAAAATTATTCAATTTTCAGTACCTGAAGAACTTTTTGAAAATCCTA
ATTCATTATTTGCTGCAAAATTTATCGGCTTTCCCGAGATTAATTTTCTTGAAAAAACCGCGGAAAAAAATTTTTATATA
AGAGGAAAATATGTTAAAATTTTGCCATCCATAACTAAATCAAACGGCAAAATTTTATATAAAAAAAATCTTGCTGAAAA
TTTTTTCTACCAAATTTATGATATTGAAAAAAATACTAATCTTGAAATTGTAACTCCGATTGATATTACTGGTCAAAAAG
TTCAAATTGAGTATGATCAAAGCAAAATTCTTGCCTTTGATAAAGAGGGTAATCGTGTTCGGGATTAA

Upstream 100 bases:

>100_bases
TAATTTTTGTGAAATTTTTTATAAAAAAATAAGAAAAATTTTTATTGTTCTTTTAAAATTTTTTGAATATAATAAATTAT
AAATTAGAAATGCAAAAATT

Downstream 100 bases:

>100_bases
AAAAAATACTATAAAATCGGTTGTTTTTAATAAAAATACGCAGGCAATTTTGCTAATTAGCCCTCTTGTAATCTTTCTTT
TAATTTTTTCTGTCTATCCT

Product: glycerol transporter subunit A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MQKKGKIFIMESQNSAIKIKNLIFSYDKKEFLEINNLEIPAKKITTILGPSGSGKSTFLNLLAGFLPSKAAIEYSPEFEH
FGYIMQKNNLYEEISVKKNLWISTKNSLKWRKKVWLLSLREFAKIKNLPDFGKNLTNFFIEKSDSFWKKIAQKVNFYIFI
IKNVKFYYFYIKFCKKQFEIEIKKILKILEIEDIFEKKAAKISGGQEQRVAFAKSIIKGDNMVLMDEPFSSLDTKIKEAT
IKLLLKIKDEFKMTIILVTHDQNDAMKISDKIILLNKGKIIQFSVPEELFENPNSLFAAKFIGFPEINFLEKTAEKNFYI
RGKYVKILPSITKSNGKILYKKNLAENFFYQIYDIEKNTNLEIVTPIDITGQKVQIEYDQSKILAFDKEGNRVRD

Sequences:

>Translated_395_residues
MQKKGKIFIMESQNSAIKIKNLIFSYDKKEFLEINNLEIPAKKITTILGPSGSGKSTFLNLLAGFLPSKAAIEYSPEFEH
FGYIMQKNNLYEEISVKKNLWISTKNSLK*RKKV*LLSLREFAKIKNLPDFGKNLTNFFIEKSDSF*KKIAQKVNFYIFI
IKNVKFYYFYIKFCKKQFEIEIKKILKILEIEDIFEKKAAKISGGQEQRVAFAKSIIKGDNMVLMDEPFSSLDTKIKEAT
IKLLLKIKDEFKMTIILVTHDQNDAMKISDKIILLNKGKIIQFSVPEELFENPNSLFAAKFIGFPEINFLEKTAEKNFYI
RGKYVKILPSITKSNGKILYKKNLAENFFYQIYDIEKNTNLEIVTPIDITGQKVQIEYDQSKILAFDKEGNRVRD
>Mature_395_residues
MQKKGKIFIMESQNSAIKIKNLIFSYDKKEFLEINNLEIPAKKITTILGPSGSGKSTFLNLLAGFLPSKAAIEYSPEFEH
FGYIMQKNNLYEEISVKKNLWISTKNSLK*RKKV*LLSLREFAKIKNLPDFGKNLTNFFIEKSDSF*KKIAQKVNFYIFI
IKNVKFYYFYIKFCKKQFEIEIKKILKILEIEDIFEKKAAKISGGQEQRVAFAKSIIKGDNMVLMDEPFSSLDTKIKEAT
IKLLLKIKDEFKMTIILVTHDQNDAMKISDKIILLNKGKIIQFSVPEELFENPNSLFAAKFIGFPEINFLEKTAEKNFYI
RGKYVKILPSITKSNGKILYKKNLAENFFYQIYDIEKNTNLEIVTPIDITGQKVQIEYDQSKILAFDKEGNRVRD

Specific function: Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system [H]

COG id: COG3839

COG function: function code G; ABC-type sugar transport systems, ATPase components

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI87081709, Length=290, Percent_Identity=24.8275862068966, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1787712, Length=357, Percent_Identity=25.2100840336134, Blast_Score=116, Evalue=3e-27,
Organism=Escherichia coli, GI87082267, Length=154, Percent_Identity=33.1168831168831, Blast_Score=112, Evalue=5e-26,
Organism=Escherichia coli, GI87081791, Length=147, Percent_Identity=31.9727891156463, Blast_Score=112, Evalue=5e-26,
Organism=Escherichia coli, GI1788761, Length=201, Percent_Identity=26.3681592039801, Blast_Score=111, Evalue=1e-25,
Organism=Escherichia coli, GI1787370, Length=157, Percent_Identity=32.484076433121, Blast_Score=108, Evalue=8e-25,
Organism=Escherichia coli, GI1790467, Length=154, Percent_Identity=31.1688311688312, Blast_Score=105, Evalue=5e-24,
Organism=Escherichia coli, GI1788450, Length=150, Percent_Identity=27.3333333333333, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1789032, Length=264, Percent_Identity=22.7272727272727, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1789672, Length=286, Percent_Identity=24.4755244755245, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1790162, Length=287, Percent_Identity=25.7839721254355, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI1788225, Length=293, Percent_Identity=24.2320819112628, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI145693107, Length=307, Percent_Identity=21.1726384364821, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1787029, Length=153, Percent_Identity=29.4117647058824, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787105, Length=121, Percent_Identity=32.2314049586777, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1786253, Length=123, Percent_Identity=28.4552845528455, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1786398, Length=128, Percent_Identity=28.90625, Blast_Score=78, Evalue=9e-16,
Organism=Escherichia coli, GI1788644, Length=148, Percent_Identity=30.4054054054054, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1786872, Length=150, Percent_Identity=30.6666666666667, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787164, Length=121, Percent_Identity=31.404958677686, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI1787500, Length=264, Percent_Identity=20.0757575757576, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI48994997, Length=286, Percent_Identity=18.8811188811189, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1789891, Length=260, Percent_Identity=22.6923076923077, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI1789962, Length=115, Percent_Identity=23.4782608695652, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1789963, Length=185, Percent_Identity=24.3243243243243, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1786563, Length=141, Percent_Identity=29.7872340425532, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1788506, Length=105, Percent_Identity=24.7619047619048, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI48994883, Length=286, Percent_Identity=22.027972027972, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1787089, Length=267, Percent_Identity=22.0973782771536, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI193209708, Length=101, Percent_Identity=35.6435643564356, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI85726357, Length=315, Percent_Identity=24.7619047619048, Blast_Score=69, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR008995
- InterPro:   IPR017879
- InterPro:   IPR013611 [H]

Pfam domain/function: PF00005 ABC_tran; PF08402 TOBE_2 [H]

EC number: =3.6.3.31 [H]

Molecular weight: Translated: 45474; Mature: 45474

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKKGKIFIMESQNSAIKIKNLIFSYDKKEFLEINNLEIPAKKITTILGPSGSGKSTFLN
CCCCCCEEEEECCCCEEEEEHHHHHCCCHHHEEECCCCCCHHHHHEEECCCCCCHHHHHH
LLAGFLPSKAAIEYSPEFEHFGYIMQKNNLYEEISVKKNLWISTKNSLKRKKVLLSLREF
HHHHHCCCCCEEEECCCHHHCCEEEECCCCHHHHCCCCCEEEECHHHHHHHHHHHHHHHH
AKIKNLPDFGKNLTNFFIEKSDSFKKIAQKVNFYIFIIKNVKFYYFYIKFCKKQFEIEIK
HHHCCCCHHHHHHHHHHEECCCHHHHHHHHCCEEEEEEECCEEEHHHHHHHHHHHHHHHH
KILKILEIEDIFEKKAAKISGGQEQRVAFAKSIIKGDNMVLMDEPFSSLDTKIKEATIKL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHH
LLKIKDEFKMTIILVTHDQNDAMKISDKIILLNKGKIIQFSVPEELFENPNSLFAAKFIG
HEEECCCEEEEEEEEEECCCCCEEEECEEEEEECCCEEEEECCHHHHCCCCCEEEEEECC
FPEINFLEKTAEKNFYIRGKYVKILPSITKSNGKILYKKNLAENFFYQIYDIEKNTNLEI
CCCCHHHHHHHCCCEEEEEEEEEEEECEECCCCEEEEECCCCCCEEEEEEEECCCCCEEE
VTPIDITGQKVQIEYDQSKILAFDKEGNRVRD
EEECCCCCCEEEEEECCCEEEEEECCCCCCCC
>Mature Secondary Structure
MQKKGKIFIMESQNSAIKIKNLIFSYDKKEFLEINNLEIPAKKITTILGPSGSGKSTFLN
CCCCCCEEEEECCCCEEEEEHHHHHCCCHHHEEECCCCCCHHHHHEEECCCCCCHHHHHH
LLAGFLPSKAAIEYSPEFEHFGYIMQKNNLYEEISVKKNLWISTKNSLKRKKVLLSLREF
HHHHHCCCCCEEEECCCHHHCCEEEECCCCHHHHCCCCCEEEECHHHHHHHHHHHHHHHH
AKIKNLPDFGKNLTNFFIEKSDSFKKIAQKVNFYIFIIKNVKFYYFYIKFCKKQFEIEIK
HHHCCCCHHHHHHHHHHEECCCHHHHHHHHCCEEEEEEECCEEEHHHHHHHHHHHHHHHH
KILKILEIEDIFEKKAAKISGGQEQRVAFAKSIIKGDNMVLMDEPFSSLDTKIKEATIKL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHH
LLKIKDEFKMTIILVTHDQNDAMKISDKIILLNKGKIIQFSVPEELFENPNSLFAAKFIG
HEEECCCEEEEEEEEEECCCCCEEEECEEEEEECCCEEEEECCHHHHCCCCCEEEEEECC
FPEINFLEKTAEKNFYIRGKYVKILPSITKSNGKILYKKNLAENFFYQIYDIEKNTNLEI
CCCCHHHHHHHCCCEEEEEEEEEEEECEECCCCEEEEECCCCCCEEEEEEEECCCCCEEE
VTPIDITGQKVQIEYDQSKILAFDKEGNRVRD
EEECCCCCCEEEEEECCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA