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The map label for this gene is rpmI

Identifier: 54020113

GI number: 54020113

Start: 283094

End: 283288

Strand: Direct

Name: rpmI

Synonym: mhp257

Alternate gene names: 54020113

Gene position: 283094-283288 (Clockwise)

Preceding gene: 54020112

Following gene: 54020114

Centisome position: 31.71

GC content: 25.13

Gene sequence:

>195_bases
ATGTCTAAAATCAAATTTAAAACAAAATCAGCATTAAAAAAAAGGATAAAAGTAACGGGAACAGGAAAAGTTAAACATGG
CCATGCTTATCGTTCACATCTAGCTCAAAGTAAAACAACAAAACAAAAACGTCAATCAAGAAAATCAACTTTAATGAATA
ATTCTGATTTTAAAAGACTAAAAAAATTAATTTAA

Upstream 100 bases:

>100_bases
CATCTTGAACGTGATCGCAAAAAACTCCCAAAATTCACTTCAGCAAAACAACTAAAAGAATTACTCGAATACGAAAAACA
AAAAAAAGAGGAAGAAGAGA

Downstream 100 bases:

>100_bases
AAAACACTTTTAAGAAAAATACATAAAAAGAAAGGATATTTTAAAATGAGAGTTAAAGGCGGAAGTACAACACGTCAGCG
TCGCCGTCGTTGATTAAAAT

Product: 50S ribosomal protein L35

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 63

Protein sequence:

>64_residues
MSKIKFKTKSALKKRIKVTGTGKVKHGHAYRSHLAQSKTTKQKRQSRKSTLMNNSDFKRLKKLI

Sequences:

>Translated_64_residues
MSKIKFKTKSALKKRIKVTGTGKVKHGHAYRSHLAQSKTTKQKRQSRKSTLMNNSDFKRLKKLI
>Mature_63_residues
SKIKFKTKSALKKRIKVTGTGKVKHGHAYRSHLAQSKTTKQKRQSRKSTLMNNSDFKRLKKLI

Specific function: Unknown

COG id: COG0291

COG function: function code J; Ribosomal protein L35

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L35P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL35_MYCH2 (Q601E5)

Other databases:

- EMBL:   AE017332
- RefSeq:   YP_115770.1
- ProteinModelPortal:   Q601E5
- SMR:   Q601E5
- STRING:   Q601E5
- GeneID:   3105440
- GenomeReviews:   AE017332_GR
- KEGG:   mhy:mhp257
- eggNOG:   COG0291
- HOGENOM:   HBG734125
- OMA:   HLAQNKT
- ProtClustDB:   PRK00172
- BioCyc:   MHYO295358:MHP257-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00514
- InterPro:   IPR021137
- InterPro:   IPR018265
- InterPro:   IPR001706
- PRINTS:   PR00064
- TIGRFAMs:   TIGR00001

Pfam domain/function: PF01632 Ribosomal_L35p

EC number: NA

Molecular weight: Translated: 7413; Mature: 7282

Theoretical pI: Translated: 12.45; Mature: 12.45

Prosite motif: PS00936 RIBOSOMAL_L35

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIKFKTKSALKKRIKVTGTGKVKHGHAYRSHLAQSKTTKQKRQSRKSTLMNNSDFKRL
CCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
KKLI
HHHC
>Mature Secondary Structure 
SKIKFKTKSALKKRIKVTGTGKVKHGHAYRSHLAQSKTTKQKRQSRKSTLMNNSDFKRL
CCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
KKLI
HHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA