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The map label for this gene is recO [H]

Identifier: 54020102

GI number: 54020102

Start: 254678

End: 255358

Strand: Direct

Name: recO [H]

Synonym: mhp227

Alternate gene names: 54020102

Gene position: 254678-255358 (Clockwise)

Preceding gene: 54020101

Following gene: 54020103

Centisome position: 28.53

GC content: 23.79

Gene sequence:

>681_bases
ATGGCTGAAAAAATTATTAAAGGAATTATTGTTGATCGACTTAATTTTCGTGATTTTGATCTAATAATTAAATTAGCCAC
TAATTTTGGCATTATAAAAATGGTAGCATTGGGCGTTAGAAAAACAACAAGCAAAAATATTTATATACTAAATCTTGGTT
GTTTAGGTGAATTTGAGATTTTTTTAGCAAAAAATCCTAATAAATTATCAAAATTAAAAAAGGGCGAATGTTTTCTGCAT
TTGGATTTAGTTAATAAAAATATTTATAACTTTTGAAAATTTTCCTCACAAATTATGCATGAGCAGAATTTTGAACCTAA
AATTTTTCCAATTTTAGAACAAGCATTTTTTAAAATTAACACCAAAAATGCTGATGCAATTAAGGTTTACACAATTATTA
ACTGGATTAAATTTAATGGTTGAATTGCAAATCTTACAAGTTGTAAGGTTTGCAAAACCAACCAACGATTAGTGAATTTT
GATTTTGCTGGGGGAATGGAATGTTTTCGCCATCGAAGCTTAAAACCTTTAATTCGTTTTAATCCAAAAGAATTAGAAAT
TATTTATTGATCAGATTTTAGTTTAGATTTATTTTTAGAAAAAATTGATTTTTATTATATTTATTCTTTGTTTGATGTTT
TAAAATTATTTTTAAATAAAAATTCATACATTTTTCTATAA

Upstream 100 bases:

>100_bases
AAAATTTTTTAAATTTTTTTAATTAAATTAATATTAAAATCCAAATTAAATTTAAATACTTATTTTTTATCACTAATATA
TAGGAATTTTTTCTTAGAAT

Downstream 100 bases:

>100_bases
ACTTTTGGTATAATTTTTAAAAATTTATGATTAGAATTATTTCCGGAAATTATCGTGGTGCGGTTATTAAAAATCCTGAA
TTTTCAGTGGTGCGTCCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MAEKIIKGIIVDRLNFRDFDLIIKLATNFGIIKMVALGVRKTTSKNIYILNLGCLGEFEIFLAKNPNKLSKLKKGECFLH
LDLVNKNIYNFWKFSSQIMHEQNFEPKIFPILEQAFFKINTKNADAIKVYTIINWIKFNGWIANLTSCKVCKTNQRLVNF
DFAGGMECFRHRSLKPLIRFNPKELEIIYWSDFSLDLFLEKIDFYYIYSLFDVLKLFLNKNSYIFL

Sequences:

>Translated_226_residues
MAEKIIKGIIVDRLNFRDFDLIIKLATNFGIIKMVALGVRKTTSKNIYILNLGCLGEFEIFLAKNPNKLSKLKKGECFLH
LDLVNKNIYNF*KFSSQIMHEQNFEPKIFPILEQAFFKINTKNADAIKVYTIINWIKFNG*IANLTSCKVCKTNQRLVNF
DFAGGMECFRHRSLKPLIRFNPKELEIIY*SDFSLDLFLEKIDFYYIYSLFDVLKLFLNKNSYIFL
>Mature_225_residues
AEKIIKGIIVDRLNFRDFDLIIKLATNFGIIKMVALGVRKTTSKNIYILNLGCLGEFEIFLAKNPNKLSKLKKGECFLHL
DLVNKNIYNF*KFSSQIMHEQNFEPKIFPILEQAFFKINTKNADAIKVYTIINWIKFNG*IANLTSCKVCKTNQRLVNFD
FAGGMECFRHRSLKPLIRFNPKELEIIY*SDFSLDLFLEKIDFYYIYSLFDVLKLFLNKNSYIFL

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 26077; Mature: 25946

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKIIKGIIVDRLNFRDFDLIIKLATNFGIIKMVALGVRKTTSKNIYILNLGCLGEFEI
CHHHHHHHHHHHCCCCCCHHEEEEECCCCCHHHHHHHHCCCCCCCCEEEEEECCCCEEEE
FLAKNPNKLSKLKKGECFLHLDLVNKNIYNFKFSSQIMHEQNFEPKIFPILEQAFFKINT
EEECCCHHHHHCCCCCEEEEEEEECCCEEEEEEHHHHHHHCCCCCCHHHHHHHHHEEEEC
KNADAIKVYTIINWIKFNGIANLTSCKVCKTNQRLVNFDFAGGMECFRHRSLKPLIRFNP
CCCCEEEEEEEEEEHEECCCCCCCEEEEECCCCEEEEEECCCCHHHHHCCCCCHHEEECC
KELEIIYSDFSLDLFLEKIDFYYIYSLFDVLKLFLNKNSYIFL
CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
>Mature Secondary Structure 
AEKIIKGIIVDRLNFRDFDLIIKLATNFGIIKMVALGVRKTTSKNIYILNLGCLGEFEI
HHHHHHHHHHHCCCCCCHHEEEEECCCCCHHHHHHHHCCCCCCCCEEEEEECCCCEEEE
FLAKNPNKLSKLKKGECFLHLDLVNKNIYNFKFSSQIMHEQNFEPKIFPILEQAFFKINT
EEECCCHHHHHCCCCCEEEEEEEECCCEEEEEEHHHHHHHCCCCCCHHHHHHHHHEEEEC
KNADAIKVYTIINWIKFNGIANLTSCKVCKTNQRLVNFDFAGGMECFRHRSLKPLIRFNP
CCCCEEEEEEEEEEHEECCCCCCCEEEEECCCCEEEEEECCCCHHHHHCCCCCHHEEECC
KELEIIYSDFSLDLFLEKIDFYYIYSLFDVLKLFLNKNSYIFL
CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA