Click here to switch to the map view.

The map label for this gene is 53722642

Identifier: 53722642

GI number: 53722642

Start: 2193709

End: 2194320

Strand: Reverse

Name: 53722642

Synonym: BPSS1619

Alternate gene names: NA

Gene position: 2194320-2193709 (Counterclockwise)

Preceding gene: 53722643

Following gene: 53722641

Centisome position: 69.16

GC content: 76.14

Gene sequence:

>612_bases
ATGAGCGCCGCCGATCTGAGGCCCGTGCGGATCATCGCGGGCGCGCCCGCGGCCGAGCCGGCCGGTGCGCCGGCGCCGCG
AGCCGCGCGGCGCGGCTTCGACTACGCGCAGTTGATGCGGCGCTCGCGCGTCGCGCCGGCCGGCGCGCCCGCGCCGCGCG
GCGACGGCGAACGCCCGCGCGACGCGGCGATGCCGTGGCGCGACGGCGCCGCGCCGTCGTTCGAGCGCGATCCGGCCGCG
CTGCCCGATGCGCTCGGCCGCGAGGCGATGGCGCGCGCGTGCGCGGGCGCCGATGCGTTCGTCAATCAGGTGTTCGCGCA
GCGCGAGCGGGTGGTGCGCGTCGCCGAAGCGCTGGCCGCCGAGATCGCCGCGCTCGGCGGCGGCGACGCGTCGGGCCAGT
GGGAGATCAGCCTGCCGCTCGACGCGGCGTTGCTGCCGGATACGGTGCTGCATCTCGTTCTTTCGCGTTTCGACTTGCGG
CTTCGGTTCGAGACGCCGGACGCGGCGACGCGGCACTTACTCTGCACACATGGCGCGACGCTGCACGCGCGACTCGACAC
GCTGCTCGCGCATCACGGCGCGCCGCGCACGATCGAGATCGACGTCGGCTGA

Upstream 100 bases:

>100_bases
CGCGGCTCGACTGGCTGCCCGTCTATTCGTATCAGGAGCTCGGCGACCAGGTGCAATTGCAGCCGGTCGGCCGCGTGACG
ATGCCGACGGCGGCCCACGC

Downstream 100 bases:

>100_bases
AACGCGCGCAATCGAACCCGACCGCGACGATGAACACCGAGCCGATCGAACTGGAACCCGCTACCGCCGAGCCGCCCGGC
ATCGACACCGCGCTGCCGCT

Product: type III secretion protein

Products: NA

Alternate protein names: Type III Secretion Protein

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MSAADLRPVRIIAGAPAAEPAGAPAPRAARRGFDYAQLMRRSRVAPAGAPAPRGDGERPRDAAMPWRDGAAPSFERDPAA
LPDALGREAMARACAGADAFVNQVFAQRERVVRVAEALAAEIAALGGGDASGQWEISLPLDAALLPDTVLHLVLSRFDLR
LRFETPDAATRHLLCTHGATLHARLDTLLAHHGAPRTIEIDVG

Sequences:

>Translated_203_residues
MSAADLRPVRIIAGAPAAEPAGAPAPRAARRGFDYAQLMRRSRVAPAGAPAPRGDGERPRDAAMPWRDGAAPSFERDPAA
LPDALGREAMARACAGADAFVNQVFAQRERVVRVAEALAAEIAALGGGDASGQWEISLPLDAALLPDTVLHLVLSRFDLR
LRFETPDAATRHLLCTHGATLHARLDTLLAHHGAPRTIEIDVG
>Mature_202_residues
SAADLRPVRIIAGAPAAEPAGAPAPRAARRGFDYAQLMRRSRVAPAGAPAPRGDGERPRDAAMPWRDGAAPSFERDPAAL
PDALGREAMARACAGADAFVNQVFAQRERVVRVAEALAAEIAALGGGDASGQWEISLPLDAALLPDTVLHLVLSRFDLRL
RFETPDAATRHLLCTHGATLHARLDTLLAHHGAPRTIEIDVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21423; Mature: 21291

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAADLRPVRIIAGAPAAEPAGAPAPRAARRGFDYAQLMRRSRVAPAGAPAPRGDGERPR
CCCCCCCCEEEEECCCCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
DAAMPWRDGAAPSFERDPAALPDALGREAMARACAGADAFVNQVFAQRERVVRVAEALAA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
EIAALGGGDASGQWEISLPLDAALLPDTVLHLVLSRFDLRLRFETPDAATRHLLCTHGAT
HHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHCCCCH
LHARLDTLLAHHGAPRTIEIDVG
HHHHHHHHHHHCCCCCEEEEECC
>Mature Secondary Structure 
SAADLRPVRIIAGAPAAEPAGAPAPRAARRGFDYAQLMRRSRVAPAGAPAPRGDGERPR
CCCCCCCEEEEECCCCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
DAAMPWRDGAAPSFERDPAALPDALGREAMARACAGADAFVNQVFAQRERVVRVAEALAA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
EIAALGGGDASGQWEISLPLDAALLPDTVLHLVLSRFDLRLRFETPDAATRHLLCTHGAT
HHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHCCCCH
LHARLDTLLAHHGAPRTIEIDVG
HHHHHHHHHHHCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA