Click here to switch to the map view.

The map label for this gene is yvfK [H]

Identifier: 52787957

GI number: 52787957

Start: 4124412

End: 4125680

Strand: Reverse

Name: yvfK [H]

Synonym: BLi04280

Alternate gene names: 52787957

Gene position: 4125680-4124412 (Counterclockwise)

Preceding gene: 52787958

Following gene: 52787956

Centisome position: 97.7

GC content: 48.31

Gene sequence:

>1269_bases
ATGATGAATATGAAAAAATATGTTGGAATCAGCAGTGTCATTGCTCTCAGTTTGTCTTTAACTGCCTGCGGGCCTAAAGA
GAGCAGCAATGGAGCATCAGACTCGAAGCAAAAGGAACTCGTGGTCTGGGAAGATAAAGAGAAAAGCGAAGGCATTAAAG
ATGCCGTCGCCCAATTTGAAAAAGAGCACGGCGTATCTGTCAAAGTCGTTGAAAAGCCTTACGCAAAGCAGATCGAAGAC
TTGCGGATGGATGGACCGGCGGGAACGGGTCCGGATGTGTTAACGATGCCCGGAGACCAAATCGGGACAGCGGTAACGGA
AGGTTTGATCAAGGAATTAAAGGTGGACAAAGAGATCCAATCGATCTATACGGAACCTGCCATGAGATCGCAGGTGACAA
ACGGCAAGGTCTACGGCCTGCCGAAAGCGGTCGAAACGACGATGCTCTACTATAATAAAGATTTAATTTCTGAAAAAGAA
CTGCCGAAAACGCTGGATGAATGGTATGAGTATTCCAAAAAAACGGCTGACGGCAAAAAATTCGGCTTCCTGGCGCTGTT
TGACCAGATTTATTATGCACAGAGCGTCATGGGAGGGTACGGCGGCTACATTTTTAAAAGCGATGCCGACGGCACTTATG
ATCCGGCCGACCTAGGCTTGAACAACAAAGGTGCAGTCGAAGGCGCCGAGTACATTCAGAAGTTTTACCAAGAGGGGCTG
TTCCCTGCCGGAATTATTGGGGAGCAGGGCATCAATGTGCTGGAATCGCTGTTTACGGAAGGAAAAGCAGCAGCGATCAT
TTCAGGCCCGTGGAACCTGGAACCGTTCAAAAAAGCGGGTATCAATTACGGGGTTGCCAAGCTGCCTAAACTGTCCAACG
GCAAGCATATGAGTTCTTTTGTCGGCGTGAAGAGCTACAATGTAAGCGCTTATTCGAAGAATGCCGATCTAGCCGAACAA
TTAGTCGTCTTCCTCGCCAATAAAGAAAACTCAAAGAAGAGATATGAGATCACAAAAGAAGTACCCGCAGTCAAAGAACT
GGCGGATGATCCTGCCGTCACAAAAAGCGAAGCGGCTCAAGCCGTTGCCGAGCAATCTCAGTACTCAGAGTTGACACCGA
ATATTCCTGAGATGAATGAAGTATGGACGCCGGCGGATGCGGCTCTGCAAACAATTGCAACCGGAAAAGCCGAACCGAAA
AAAGCGCTTGATCAAGCCGCGGAAACGATACAAGGACAGATCAAAGCGAAGCACAGCGGCAGCAAATAA

Upstream 100 bases:

>100_bases
CATTTTACCTGTGTAAGTAAAATAATTGTTTACACTTTTCCTAAGACATGCTATATTGTTTTTGTAAAGCGCTTTCACTC
CAATAAAAGGAATGAGACAA

Downstream 100 bases:

>100_bases
GCCGCGGGCGGTGGTGTCAAACTTGTCTTAAGTTTGGCGCCATTTATTATAAGCACGTCCATATAAAGAGGTGAAGGAGA
AGGTGCAGCATCGCAAAAAA

Product: YvfK

Products: ADP; phosphate; maltose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MMNMKKYVGISSVIALSLSLTACGPKESSNGASDSKQKELVVWEDKEKSEGIKDAVAQFEKEHGVSVKVVEKPYAKQIED
LRMDGPAGTGPDVLTMPGDQIGTAVTEGLIKELKVDKEIQSIYTEPAMRSQVTNGKVYGLPKAVETTMLYYNKDLISEKE
LPKTLDEWYEYSKKTADGKKFGFLALFDQIYYAQSVMGGYGGYIFKSDADGTYDPADLGLNNKGAVEGAEYIQKFYQEGL
FPAGIIGEQGINVLESLFTEGKAAAIISGPWNLEPFKKAGINYGVAKLPKLSNGKHMSSFVGVKSYNVSAYSKNADLAEQ
LVVFLANKENSKKRYEITKEVPAVKELADDPAVTKSEAAQAVAEQSQYSELTPNIPEMNEVWTPADAALQTIATGKAEPK
KALDQAAETIQGQIKAKHSGSK

Sequences:

>Translated_422_residues
MMNMKKYVGISSVIALSLSLTACGPKESSNGASDSKQKELVVWEDKEKSEGIKDAVAQFEKEHGVSVKVVEKPYAKQIED
LRMDGPAGTGPDVLTMPGDQIGTAVTEGLIKELKVDKEIQSIYTEPAMRSQVTNGKVYGLPKAVETTMLYYNKDLISEKE
LPKTLDEWYEYSKKTADGKKFGFLALFDQIYYAQSVMGGYGGYIFKSDADGTYDPADLGLNNKGAVEGAEYIQKFYQEGL
FPAGIIGEQGINVLESLFTEGKAAAIISGPWNLEPFKKAGINYGVAKLPKLSNGKHMSSFVGVKSYNVSAYSKNADLAEQ
LVVFLANKENSKKRYEITKEVPAVKELADDPAVTKSEAAQAVAEQSQYSELTPNIPEMNEVWTPADAALQTIATGKAEPK
KALDQAAETIQGQIKAKHSGSK
>Mature_422_residues
MMNMKKYVGISSVIALSLSLTACGPKESSNGASDSKQKELVVWEDKEKSEGIKDAVAQFEKEHGVSVKVVEKPYAKQIED
LRMDGPAGTGPDVLTMPGDQIGTAVTEGLIKELKVDKEIQSIYTEPAMRSQVTNGKVYGLPKAVETTMLYYNKDLISEKE
LPKTLDEWYEYSKKTADGKKFGFLALFDQIYYAQSVMGGYGGYIFKSDADGTYDPADLGLNNKGAVEGAEYIQKFYQEGL
FPAGIIGEQGINVLESLFTEGKAAAIISGPWNLEPFKKAGINYGVAKLPKLSNGKHMSSFVGVKSYNVSAYSKNADLAEQ
LVVFLANKENSKKRYEITKEVPAVKELADDPAVTKSEAAQAVAEQSQYSELTPNIPEMNEVWTPADAALQTIATGKAEPK
KALDQAAETIQGQIKAKHSGSK

Specific function: Binding protein for cyclodextrin; involved in its cellular uptake. Interacts with all natural cyclodextrins:alpha, beta and gamma [H]

COG id: COG2182

COG function: function code G; Maltose-binding periplasmic proteins/domains

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1790466, Length=413, Percent_Identity=30.2663438256659, Blast_Score=140, Evalue=2e-34,

Paralogues:

None

Copy number: 660 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 720 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase,

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006060
- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 45881; Mature: 45881

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNMKKYVGISSVIALSLSLTACGPKESSNGASDSKQKELVVWEDKEKSEGIKDAVAQFE
CCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHH
KEHGVSVKVVEKPYAKQIEDLRMDGPAGTGPDVLTMPGDQIGTAVTEGLIKELKVDKEIQ
HHCCCEEEEECCHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHH
SIYTEPAMRSQVTNGKVYGLPKAVETTMLYYNKDLISEKELPKTLDEWYEYSKKTADGKK
HHHCCHHHHHHCCCCEEECCCHHHHHHHHHHCHHHHCHHHHHHHHHHHHHHHHCCCCCCH
FGFLALFDQIYYAQSVMGGYGGYIFKSDADGTYDPADLGLNNKGAVEGAEYIQKFYQEGL
HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHCCC
FPAGIIGEQGINVLESLFTEGKAAAIISGPWNLEPFKKAGINYGVAKLPKLSNGKHMSSF
CCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHCCCCCCHHHCCCCCCCCHHHHH
VGVKSYNVSAYSKNADLAEQLVVFLANKENSKKRYEITKEVPAVKELADDPAVTKSEAAQ
HCEEECCCEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHCCCCCCCHHHHHH
AVAEQSQYSELTPNIPEMNEVWTPADAALQTIATGKAEPKKALDQAAETIQGQIKAKHSG
HHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC
SK
CC
>Mature Secondary Structure
MMNMKKYVGISSVIALSLSLTACGPKESSNGASDSKQKELVVWEDKEKSEGIKDAVAQFE
CCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHH
KEHGVSVKVVEKPYAKQIEDLRMDGPAGTGPDVLTMPGDQIGTAVTEGLIKELKVDKEIQ
HHCCCEEEEECCHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHH
SIYTEPAMRSQVTNGKVYGLPKAVETTMLYYNKDLISEKELPKTLDEWYEYSKKTADGKK
HHHCCHHHHHHCCCCEEECCCHHHHHHHHHHCHHHHCHHHHHHHHHHHHHHHHCCCCCCH
FGFLALFDQIYYAQSVMGGYGGYIFKSDADGTYDPADLGLNNKGAVEGAEYIQKFYQEGL
HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHCCC
FPAGIIGEQGINVLESLFTEGKAAAIISGPWNLEPFKKAGINYGVAKLPKLSNGKHMSSF
CCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHCCCCCCHHHCCCCCCCCHHHHH
VGVKSYNVSAYSKNADLAEQLVVFLANKENSKKRYEITKEVPAVKELADDPAVTKSEAAQ
HCEEECCCEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHCCCCCCCHHHHHH
AVAEQSQYSELTPNIPEMNEVWTPADAALQTIATGKAEPKKALDQAAETIQGQIKAKHSG
HHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC
SK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; maltose [Periplasm]; H2O [C]

Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]