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The map label for this gene is ytsA [H]

Identifier: 52787890

GI number: 52787890

Start: 4046743

End: 4047429

Strand: Reverse

Name: ytsA [H]

Synonym: BLi04213

Alternate gene names: 52787890

Gene position: 4047429-4046743 (Counterclockwise)

Preceding gene: 52787891

Following gene: 52787889

Centisome position: 95.85

GC content: 45.56

Gene sequence:

>687_bases
ATGTTTAAACTGCTGTTGATAGAAGATGATGAATCGCTGTTTCAAGAAATAAAAGAGCGGTTAACCGGGTGGTCATACGA
GGTATACGGCATCAACGATTTCAGCGAAGTGATGCAGGAGTTTGCGGCGATTAAGCCAGACTGCGTCATCATCGATATTC
AGCTGCCTAAATATGACGGGTTTCATTGGTGCCGGCAGATCCGCTCCCGTTCCAACGTTCCGATTCTCTTTTTATCTTCG
CGCGATCATCCTGCTGATATGGTCATGTCCATGCAGTTCGGAGCGGATGATTATATTCAGAAGCCGTTTCATTTTGACGT
GCTGATTGCCAAGATCCAGGCGATTTTCCGTCGCGTCTACGACTATAATACAGAGCCTGAGATTCTTAAAAAAACGTGGT
GCGGTGCAACCGTTGATCCCGAACAAAACCGCGTCAGCAATAAGGCGGGGGCGATCGAACTGACAAGGAATGAAATGTTC
ATTTTAAAACAATTGATCGACCAAAAAAACAAAATTGTCAGCAGGGAAGAATTGATGAGAAGCCTATGGAACGATGAACG
CTTTGTCAGCGATAACACGCTGACAGTCAACGTAAACCGCTTAAGAAAAAAACTCGATGCCTTGAACTTGGGGCAATATA
TCGAGACGAAGGTCGGCCAGGGCTATATGGCGAAAGAAGAAGGATGA

Upstream 100 bases:

>100_bases
GGCTGTCCTTTACAGGACGGCCCTTTTTTTTCTCTGTAGCGCGTGAAAACAATTTGCTATACACTTGATTTAGAAAATAG
AAAAAAGCGCGGTGAGGCAA

Downstream 100 bases:

>100_bases
TGAGAATGCTGAAAGCGTTTTTGACCGAGAGGCGAAGCTGGATCGCCATATTTGTTTTGCAGCAGATCCTCTTTCTGTTT
ATCGCTTATGTCGATGCATC

Product: YtsA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MFKLLLIEDDESLFQEIKERLTGWSYEVYGINDFSEVMQEFAAIKPDCVIIDIQLPKYDGFHWCRQIRSRSNVPILFLSS
RDHPADMVMSMQFGADDYIQKPFHFDVLIAKIQAIFRRVYDYNTEPEILKKTWCGATVDPEQNRVSNKAGAIELTRNEMF
ILKQLIDQKNKIVSREELMRSLWNDERFVSDNTLTVNVNRLRKKLDALNLGQYIETKVGQGYMAKEEG

Sequences:

>Translated_228_residues
MFKLLLIEDDESLFQEIKERLTGWSYEVYGINDFSEVMQEFAAIKPDCVIIDIQLPKYDGFHWCRQIRSRSNVPILFLSS
RDHPADMVMSMQFGADDYIQKPFHFDVLIAKIQAIFRRVYDYNTEPEILKKTWCGATVDPEQNRVSNKAGAIELTRNEMF
ILKQLIDQKNKIVSREELMRSLWNDERFVSDNTLTVNVNRLRKKLDALNLGQYIETKVGQGYMAKEEG
>Mature_228_residues
MFKLLLIEDDESLFQEIKERLTGWSYEVYGINDFSEVMQEFAAIKPDCVIIDIQLPKYDGFHWCRQIRSRSNVPILFLSS
RDHPADMVMSMQFGADDYIQKPFHFDVLIAKIQAIFRRVYDYNTEPEILKKTWCGATVDPEQNRVSNKAGAIELTRNEMF
ILKQLIDQKNKIVSREELMRSLWNDERFVSDNTLTVNVNRLRKKLDALNLGQYIETKVGQGYMAKEEG

Specific function: Member of the two-component regulatory system BceS/BceR involved in the regulation of bacitracin resistance. When activated by BceS, binds to the upstream region of the bceAB promoter and up-regulates the expression of these two genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788394, Length=222, Percent_Identity=30.1801801801802, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1786599, Length=223, Percent_Identity=26.9058295964126, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1790860, Length=224, Percent_Identity=29.9107142857143, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI1787375, Length=223, Percent_Identity=31.8385650224215, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1786911, Length=224, Percent_Identity=29.0178571428571, Blast_Score=107, Evalue=7e-25,
Organism=Escherichia coli, GI87082012, Length=223, Percent_Identity=30.4932735426009, Blast_Score=103, Evalue=9e-24,
Organism=Escherichia coli, GI1790863, Length=225, Percent_Identity=27.5555555555556, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1790552, Length=229, Percent_Identity=30.5676855895196, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1789809, Length=234, Percent_Identity=26.0683760683761, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1789402, Length=231, Percent_Identity=29.8701298701299, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI1786784, Length=228, Percent_Identity=29.8245614035088, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI2367329, Length=231, Percent_Identity=27.7056277056277, Blast_Score=87, Evalue=7e-19,
Organism=Escherichia coli, GI1787229, Length=228, Percent_Identity=26.3157894736842, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI145693140, Length=232, Percent_Identity=25.8620689655172, Blast_Score=68, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26717; Mature: 26717

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKLLLIEDDESLFQEIKERLTGWSYEVYGINDFSEVMQEFAAIKPDCVIIDIQLPKYDG
CEEEEEEECCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCEEEEEEECCCCCC
FHWCRQIRSRSNVPILFLSSRDHPADMVMSMQFGADDYIQKPFHFDVLIAKIQAIFRRVY
HHHHHHHHCCCCCCEEEEECCCCCHHHHEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHH
DYNTEPEILKKTWCGATVDPEQNRVSNKAGAIELTRNEMFILKQLIDQKNKIVSREELMR
CCCCCHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHCCCHHHHHH
SLWNDERFVSDNTLTVNVNRLRKKLDALNLGQYIETKVGQGYMAKEEG
HHCCCCEEECCCEEEEEHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MFKLLLIEDDESLFQEIKERLTGWSYEVYGINDFSEVMQEFAAIKPDCVIIDIQLPKYDG
CEEEEEEECCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCEEEEEEECCCCCC
FHWCRQIRSRSNVPILFLSSRDHPADMVMSMQFGADDYIQKPFHFDVLIAKIQAIFRRVY
HHHHHHHHCCCCCCEEEEECCCCCHHHHEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHH
DYNTEPEILKKTWCGATVDPEQNRVSNKAGAIELTRNEMFILKQLIDQKNKIVSREELMR
CCCCCHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHCCCHHHHHH
SLWNDERFVSDNTLTVNVNRLRKKLDALNLGQYIETKVGQGYMAKEEG
HHCCCCEEECCCEEEEEHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377; 14612242; 12890034 [H]