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The map label for this gene is yhcV [H]

Identifier: 52787563

GI number: 52787563

Start: 3706662

End: 3707069

Strand: Reverse

Name: yhcV [H]

Synonym: BLi03885

Alternate gene names: 52787563

Gene position: 3707069-3706662 (Counterclockwise)

Preceding gene: 52787564

Following gene: 52787561

Centisome position: 87.79

GC content: 49.51

Gene sequence:

>408_bases
ATGAAACTGAAGGACATCATGACAACCAATGCTGAATGCTGCGAGCCTTCTGCCCCGATTGCGGAAATTGCCGGTAAGAT
GCGTGATTACAATGTAGGTTCAATTCCGGTCTGCGAGAACGGAAAATTGACGGGGATCGTTTCAGACCGGGATATTGTTA
TCAGATGTGTAGCTGAAAATGAAACAGATGCGGCTGCTCGGGATATCATGAGCACACAGATGGTGACAGGGCGCCCGGAT
ATGTCTGCTGAAGAGGCTGGTGATCTGATGGCGGAACACCAAATTCGCAGGCTGCCGATTGTTGAAGATGACCGTCTTGT
CGGAATCGTTGCTTTGGGGGATCTCTCCGTCTCACATGCGGATGAGAAAGCGGGAGAAGCTTTAAGCGAAATTTCAAAAC
CGGCTTAA

Upstream 100 bases:

>100_bases
AAAAACGATATATGAAAAGGAAGGGCTCTTTTAAATAGGTTTAAGCCCGCGGTATATCGGAAAAGCACATAATAACCCCA
TCATAAAGGAGGAATTCCGA

Downstream 100 bases:

>100_bases
ACAGGTTGAAGGAAGAGCGTTTTTAGCTCTTCCTTTTTTATGTTTCTTCACTTTCCCACTTTTTCAGCGGCCAAAATAAG
ACGTGCTGCCTTTTTGCATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MKLKDIMTTNAECCEPSAPIAEIAGKMRDYNVGSIPVCENGKLTGIVSDRDIVIRCVAENETDAAARDIMSTQMVTGRPD
MSAEEAGDLMAEHQIRRLPIVEDDRLVGIVALGDLSVSHADEKAGEALSEISKPA

Sequences:

>Translated_135_residues
MKLKDIMTTNAECCEPSAPIAEIAGKMRDYNVGSIPVCENGKLTGIVSDRDIVIRCVAENETDAAARDIMSTQMVTGRPD
MSAEEAGDLMAEHQIRRLPIVEDDRLVGIVALGDLSVSHADEKAGEALSEISKPA
>Mature_135_residues
MKLKDIMTTNAECCEPSAPIAEIAGKMRDYNVGSIPVCENGKLTGIVSDRDIVIRCVAENETDAAARDIMSTQMVTGRPD
MSAEEAGDLMAEHQIRRLPIVEDDRLVGIVALGDLSVSHADEKAGEALSEISKPA

Specific function: Unknown

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 14456; Mature: 14456

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKDIMTTNAECCEPSAPIAEIAGKMRDYNVGSIPVCENGKLTGIVSDRDIVIRCVAEN
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCEEEEEEECC
ETDAAARDIMSTQMVTGRPDMSAEEAGDLMAEHQIRRLPIVEDDRLVGIVALGDLSVSHA
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCC
DEKAGEALSEISKPA
HHHHHHHHHHHCCCC
>Mature Secondary Structure
MKLKDIMTTNAECCEPSAPIAEIAGKMRDYNVGSIPVCENGKLTGIVSDRDIVIRCVAEN
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCEEEEEEECC
ETDAAARDIMSTQMVTGRPDMSAEEAGDLMAEHQIRRLPIVEDDRLVGIVALGDLSVSHA
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCC
DEKAGEALSEISKPA
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]