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The map label for this gene is yvdC [H]

Identifier: 52787395

GI number: 52787395

Start: 3540375

End: 3540710

Strand: Direct

Name: yvdC [H]

Synonym: BLi03712

Alternate gene names: 52787395

Gene position: 3540375-3540710 (Clockwise)

Preceding gene: 52787393

Following gene: 52787396

Centisome position: 83.84

GC content: 48.21

Gene sequence:

>336_bases
ATGACAATCACAGACGCGGAGCAATGGACAAAGGCATTTTACAGGGAAAGAGGATGGAGCGAATACGGACCTTTCATCAG
GATGGGATTTTTAATGGAAGAGGCTGGCGAACTGGCGAGAGCGGTTAGAGCATACGAAATCGGAAGGGACCGTCCTGACG
AAGCAAAACGGCCGGCTGCTGAACTGAAAAAAGAACTGATCGAAGAAATGGGCGATGTAATGGGGAATTTGATCATGCTT
GCCGGCATATACGGTGTTTCATTGGAAGACATGATGGATGCCCATCGCTGCAAACTGACGGAACGATTTGCAGGAGAGCA
TCATCAAGATCAATGA

Upstream 100 bases:

>100_bases
CCAACTCCATATATTGATAAAAGCAATTAACATTGTACTATATATTGTTTGTTCCGTGTGCGACAATATAATTGAATTTC
TAAACGGGAGTGTATAACTT

Downstream 100 bases:

>100_bases
CCGCCTTTACGGGGAGGCAGATTTGGAGCCTGTGCTGACAGACCTCATTCGTTCAAAAGCCGTTCAGCGTCTGAAAGGGA
TTCATCAGGGCGGGGCCTCT

Product: YvdC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MTITDAEQWTKAFYRERGWSEYGPFIRMGFLMEEAGELARAVRAYEIGRDRPDEAKRPAAELKKELIEEMGDVMGNLIML
AGIYGVSLEDMMDAHRCKLTERFAGEHHQDQ

Sequences:

>Translated_111_residues
MTITDAEQWTKAFYRERGWSEYGPFIRMGFLMEEAGELARAVRAYEIGRDRPDEAKRPAAELKKELIEEMGDVMGNLIML
AGIYGVSLEDMMDAHRCKLTERFAGEHHQDQ
>Mature_110_residues
TITDAEQWTKAFYRERGWSEYGPFIRMGFLMEEAGELARAVRAYEIGRDRPDEAKRPAAELKKELIEEMGDVMGNLIMLA
GIYGVSLEDMMDAHRCKLTERFAGEHHQDQ

Specific function: Unknown

COG id: COG1694

COG function: function code R; Predicted pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011411
- InterPro:   IPR004518 [H]

Pfam domain/function: PF03819 MazG [H]

EC number: NA

Molecular weight: Translated: 12815; Mature: 12684

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
7.2 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTITDAEQWTKAFYRERGWSEYGPFIRMGFLMEEAGELARAVRAYEIGRDRPDEAKRPAA
CCCCCHHHHHHHHHHHCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHH
ELKKELIEEMGDVMGNLIMLAGIYGVSLEDMMDAHRCKLTERFAGEHHQDQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TITDAEQWTKAFYRERGWSEYGPFIRMGFLMEEAGELARAVRAYEIGRDRPDEAKRPAA
CCCCHHHHHHHHHHHCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHH
ELKKELIEEMGDVMGNLIMLAGIYGVSLEDMMDAHRCKLTERFAGEHHQDQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]