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The map label for this gene is ytfH [C]

Identifier: 52787388

GI number: 52787388

Start: 3533145

End: 3533468

Strand: Reverse

Name: ytfH [C]

Synonym: BLi03704

Alternate gene names: 52787388

Gene position: 3533468-3533145 (Counterclockwise)

Preceding gene: 52787392

Following gene: 52787387

Centisome position: 83.68

GC content: 41.36

Gene sequence:

>324_bases
ATGAATTCAGCTGTCGATCATAAAGAATGCTCTTCTTTAATTCAGGATGTATTGAAAATTTTCTCTGGTAAATGGTCATT
TTTAGTTCTCGCCGAACTCATTCAGGGCAAGCGGCGATTCAACGAGCTCAGAAGGAACTTGGGAAACGTCAACACGAAAG
GATTAACTGACACATTAAGACATCTTGAAGAAAGCGGCATGATTTCCCGGAAGGTGTTCCCAACGGTTCCTGTTACTGTA
GAATATAAATTAACAGAAAAAGGTAAAGAGTTCCACAGCATTTTTAAAGAGATGGCCGCATGGGGGGGGAAATGGCTTCC
GTAA

Upstream 100 bases:

>100_bases
GCTTTATAAAAATAAACCGTAAGATCGTTTTCTTGAATGCTCTGATGTCCATATGGTAGGATCAAGTCAAAATTGGCTAT
GAGGCAATGGAGGAATTGCT

Downstream 100 bases:

>100_bases
TGGAGCCTTTTTATTTTGCCTTCGTTTTGCGGTTCCAAATATTTCTGACTTTTGGTATAGTGATAATGTGTTTAAATTTG
CAACAAAAGGTGATCGAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MNSAVDHKECSSLIQDVLKIFSGKWSFLVLAELIQGKRRFNELRRNLGNVNTKGLTDTLRHLEESGMISRKVFPTVPVTV
EYKLTEKGKEFHSIFKEMAAWGGKWLP

Sequences:

>Translated_107_residues
MNSAVDHKECSSLIQDVLKIFSGKWSFLVLAELIQGKRRFNELRRNLGNVNTKGLTDTLRHLEESGMISRKVFPTVPVTV
EYKLTEKGKEFHSIFKEMAAWGGKWLP
>Mature_107_residues
MNSAVDHKECSSLIQDVLKIFSGKWSFLVLAELIQGKRRFNELRRNLGNVNTKGLTDTLRHLEESGMISRKVFPTVPVTV
EYKLTEKGKEFHSIFKEMAAWGGKWLP

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=100, Percent_Identity=37, Blast_Score=73, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 12264; Mature: 12264

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSAVDHKECSSLIQDVLKIFSGKWSFLVLAELIQGKRRFNELRRNLGNVNTKGLTDTLR
CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
HLEESGMISRKVFPTVPVTVEYKLTEKGKEFHSIFKEMAAWGGKWLP
HHHHCCCCHHCCCCCCCCEEEEHHHHCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNSAVDHKECSSLIQDVLKIFSGKWSFLVLAELIQGKRRFNELRRNLGNVNTKGLTDTLR
CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
HLEESGMISRKVFPTVPVTVEYKLTEKGKEFHSIFKEMAAWGGKWLP
HHHHCCCCHHCCCCCCCCEEEEHHHHCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]