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The map label for this gene is zraR [C]

Identifier: 52787387

GI number: 52787387

Start: 3531327

End: 3533045

Strand: Reverse

Name: zraR [C]

Synonym: BLi03703

Alternate gene names: 52787387

Gene position: 3533045-3531327 (Counterclockwise)

Preceding gene: 52787388

Following gene: 52787386

Centisome position: 83.67

GC content: 48.92

Gene sequence:

>1719_bases
ATGAAAGTGATGGCAATTGCTCCATATGAAGGACTGAAAGAGCTGATGGTTCAAGTGGCAGGCGGCGAGAATTTTGAATT
CGAGGCGGCTTCTGGAGATTTAGAGAAGGGCGTGGAGCTGGCGAAACAAGCGGAAGCAAACGGGACTGATTTGATTATCA
GCAGAGGTGGAACCGCTGAGCTGATCCAGCAAGAAGTTTCCATTCCGGTTGTGGATATCGAAGTGTCGGGATACGATATG
CTGCGTGTGCTTACGCTTGCCAAGGGCTATCCCGGCAAGGCGGCAATTGTCGGATTTCCGATGATTGCCGACGGCGCATC
GGCGGTGTGCGAAATTTTGGATATTCGGATCGACGCCTGCACCGTATCAGACGAACGCGATGTTGAACCGGTGCTTCTTC
AGCTCAAAGAACAGGGCTATCAGATCATTATCGGCGATGTGATCACAATTGAGAAAGCAGAGCAGCTCGGTTTAAACGGA
CTGCTTTTGACATCCGGAAAAGAAAGCATTGCCAAAGCTTTTGCATACGCTAAAAAACTGTATTCCTTTTTAGAGAGCAT
CAAGCAGAAGTACGCTGTGCCGTATCACATTTTACAAAAGGCCGAGACCGGTTATGCAGTATACAACAAGACATTGCGGC
CGGTTTTTCAAAACGGCGTATTTGCCGAACATATCGGCTTGCTGGATAATCTGGAAGAGCTGATCGGGGAAGCGGAAAAG
AAGGGAGTCATCCATTTTAGACTCCGAAAGCATGGGCGGACATGGAATATCACGGGGCGCAGGTTTTTCGTATCAGACGA
GGCATTGACCGTATTTACCGCGGAAAATGCAAAAGATGTTCGCGTTTCTTCTTTGCCCGGGGCAACGATTCTTTCTCCTT
TGCGGATGAGTTATATGGAAACATCAAGGAACGAAACGATGCAGAAGGTGCTGAAAAAAGCAGAGTTGTTCTCGGCAAGG
CGGGAACCCGTATGGATCAATGGAGCGCCCGGCTCAGGGAAAGAGAGCTTGGCCGGGCTGATCCATATGAAGGGGGAGGA
CAAGCATGAGCCGTTTCGAAAAATCGATGCCGGTTTGCTGTCTGAAGCAGAATGGGAACAGGCTTGTGAAAGCGAAGAAT
TCTTTTCAGGGAGAGGAACGCTATACATCAAACAAGTCGATCGCATGCCGCCGTCCTCGCAACGGCTTTTACTCAGGCGG
ATCAGCGAACCGTATGATGGGCCGAGGCTGATCGTTTCTTCTTCCCGCAGGCGCGCCGAGGAATTTTCAAGCGATTTATA
TGATGCGCTTTGTCATTTGGAACTGGACGTTCCCCCTCTTTCCGAAAGAAAAGAGGATATTTTGCATCTGGCTTATCTGT
TTATTGCGGAAAGCAATGAGGCATTCGGCAAACAAATCGTCGGCTTTCGAAACGAAGCTGGTGTTCTGCTTGAAGAAGCG
AAATGGCCGGGCAACCTCAGCCAATTGAGAAAAACGGTCCAAAACTGTGTCCTTGAAGCGCAGGGCGTATATATCGAGAA
GACTGACGCCGAACGGGTCCTGAGCCGCTTGAACGAGGAAGAAAGAGAAGACATCGATTTATCCGGAACGCTTGAAGAGA
TCGAAAAAAGGATCATTCAAAAGATCTATGCCGAAGAAGGGAACAATCAAACAAGAACAGCGGAAAGGCTCGGCATCAAC
AGAACGACGCTTTGGAGAAAATTGAAATCGTCAGATTGA

Upstream 100 bases:

>100_bases
ATGGAGCCTTTTTATTTTGCCTTCGTTTTGCGGTTCCAAATATTTCTGACTTTTGGTATAGTGATAATGTGTTTAAATTT
GCAACAAAAGGTGATCGAAT

Downstream 100 bases:

>100_bases
TAAGACACCGGCTAAACCGGTGTCTTATTTTTTGTTTTAATATGCAACAACAAATAAAAATATTTAGATAAATACCGTTG
ATTATTGAAACATTTATGTA

Product: hypothetical protein

Products: NA

Alternate protein names: (S)-limonene 6-monooxygenase; (S)-limonene 7-monooxygenase; Carveol dehydrogenase; Perillyl-alcohol dehydrogenase [H]

Number of amino acids: Translated: 572; Mature: 572

Protein sequence:

>572_residues
MKVMAIAPYEGLKELMVQVAGGENFEFEAASGDLEKGVELAKQAEANGTDLIISRGGTAELIQQEVSIPVVDIEVSGYDM
LRVLTLAKGYPGKAAIVGFPMIADGASAVCEILDIRIDACTVSDERDVEPVLLQLKEQGYQIIIGDVITIEKAEQLGLNG
LLLTSGKESIAKAFAYAKKLYSFLESIKQKYAVPYHILQKAETGYAVYNKTLRPVFQNGVFAEHIGLLDNLEELIGEAEK
KGVIHFRLRKHGRTWNITGRRFFVSDEALTVFTAENAKDVRVSSLPGATILSPLRMSYMETSRNETMQKVLKKAELFSAR
REPVWINGAPGSGKESLAGLIHMKGEDKHEPFRKIDAGLLSEAEWEQACESEEFFSGRGTLYIKQVDRMPPSSQRLLLRR
ISEPYDGPRLIVSSSRRRAEEFSSDLYDALCHLELDVPPLSERKEDILHLAYLFIAESNEAFGKQIVGFRNEAGVLLEEA
KWPGNLSQLRKTVQNCVLEAQGVYIEKTDAERVLSRLNEEEREDIDLSGTLEEIEKRIIQKIYAEEGNNQTRTAERLGIN
RTTLWRKLKSSD

Sequences:

>Translated_572_residues
MKVMAIAPYEGLKELMVQVAGGENFEFEAASGDLEKGVELAKQAEANGTDLIISRGGTAELIQQEVSIPVVDIEVSGYDM
LRVLTLAKGYPGKAAIVGFPMIADGASAVCEILDIRIDACTVSDERDVEPVLLQLKEQGYQIIIGDVITIEKAEQLGLNG
LLLTSGKESIAKAFAYAKKLYSFLESIKQKYAVPYHILQKAETGYAVYNKTLRPVFQNGVFAEHIGLLDNLEELIGEAEK
KGVIHFRLRKHGRTWNITGRRFFVSDEALTVFTAENAKDVRVSSLPGATILSPLRMSYMETSRNETMQKVLKKAELFSAR
REPVWINGAPGSGKESLAGLIHMKGEDKHEPFRKIDAGLLSEAEWEQACESEEFFSGRGTLYIKQVDRMPPSSQRLLLRR
ISEPYDGPRLIVSSSRRRAEEFSSDLYDALCHLELDVPPLSERKEDILHLAYLFIAESNEAFGKQIVGFRNEAGVLLEEA
KWPGNLSQLRKTVQNCVLEAQGVYIEKTDAERVLSRLNEEEREDIDLSGTLEEIEKRIIQKIYAEEGNNQTRTAERLGIN
RTTLWRKLKSSD
>Mature_572_residues
MKVMAIAPYEGLKELMVQVAGGENFEFEAASGDLEKGVELAKQAEANGTDLIISRGGTAELIQQEVSIPVVDIEVSGYDM
LRVLTLAKGYPGKAAIVGFPMIADGASAVCEILDIRIDACTVSDERDVEPVLLQLKEQGYQIIIGDVITIEKAEQLGLNG
LLLTSGKESIAKAFAYAKKLYSFLESIKQKYAVPYHILQKAETGYAVYNKTLRPVFQNGVFAEHIGLLDNLEELIGEAEK
KGVIHFRLRKHGRTWNITGRRFFVSDEALTVFTAENAKDVRVSSLPGATILSPLRMSYMETSRNETMQKVLKKAELFSAR
REPVWINGAPGSGKESLAGLIHMKGEDKHEPFRKIDAGLLSEAEWEQACESEEFFSGRGTLYIKQVDRMPPSSQRLLLRR
ISEPYDGPRLIVSSSRRRAEEFSSDLYDALCHLELDVPPLSERKEDILHLAYLFIAESNEAFGKQIVGFRNEAGVLLEEA
KWPGNLSQLRKTVQNCVLEAQGVYIEKTDAERVLSRLNEEEREDIDLSGTLEEIEKRIIQKIYAEEGNNQTRTAERLGIN
RTTLWRKLKSSD

Specific function: Involved in limonene hydroxylation to a mixture of carveol and perillyl alcohol as well as in dehydrogenation of these products to carvone and perillyl aldehyde. Aromatic alcohols containing an isopropyl or isopropenyl group at ring position 4 also served

COG id: COG3829

COG function: function code KT; Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 sigma-54 factor interaction domain [H]

Homologues:

Organism=Escherichia coli, GI1790437, Length=300, Percent_Identity=29.6666666666667, Blast_Score=100, Evalue=4e-22,
Organism=Escherichia coli, GI1788905, Length=306, Percent_Identity=29.0849673202614, Blast_Score=96, Evalue=9e-21,
Organism=Escherichia coli, GI1789233, Length=374, Percent_Identity=26.4705882352941, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1788550, Length=310, Percent_Identity=27.4193548387097, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1786524, Length=309, Percent_Identity=27.5080906148867, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI87082117, Length=315, Percent_Identity=26.3492063492064, Blast_Score=80, Evalue=5e-16,
Organism=Escherichia coli, GI1789087, Length=302, Percent_Identity=27.8145695364238, Blast_Score=80, Evalue=5e-16,
Organism=Escherichia coli, GI1787583, Length=297, Percent_Identity=24.9158249158249, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1790299, Length=322, Percent_Identity=25.1552795031056, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI87081858, Length=285, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR002197
- InterPro:   IPR000014
- InterPro:   IPR002078 [H]

Pfam domain/function: PF02954 HTH_8; PF00158 Sigma54_activat [H]

EC number: =1.14.13.48; =1.14.13.49; =1.1.1.243; =1.1.1.144 [H]

Molecular weight: Translated: 63965; Mature: 63965

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS50045 SIGMA54_INTERACT_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVMAIAPYEGLKELMVQVAGGENFEFEAASGDLEKGVELAKQAEANGTDLIISRGGTAE
CCEEEECCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCHHH
LIQQEVSIPVVDIEVSGYDMLRVLTLAKGYPGKAAIVGFPMIADGASAVCEILDIRIDAC
HHHHHCCCEEEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHEEEEE
TVSDERDVEPVLLQLKEQGYQIIIGDVITIEKAEQLGLNGLLLTSGKESIAKAFAYAKKL
ECCCCCCCHHHHHHHHHCCCEEEEECEEEEECHHHCCCCEEEEECCHHHHHHHHHHHHHH
YSFLESIKQKYAVPYHILQKAETGYAVYNKTLRPVFQNGVFAEHIGLLDNLEELIGEAEK
HHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
KGVIHFRLRKHGRTWNITGRRFFVSDEALTVFTAENAKDVRVSSLPGATILSPLRMSYME
CCEEEEEEECCCCEEEECCCEEEEECCEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHH
TSRNETMQKVLKKAELFSARREPVWINGAPGSGKESLAGLIHMKGEDKHEPFRKIDAGLL
HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHEEECCCCCCCHHHHHHHHHH
SEAEWEQACESEEFFSGRGTLYIKQVDRMPPSSQRLLLRRISEPYDGPRLIVSSSRRRAE
CHHHHHHHCCCHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEECCHHHHHH
EFSSDLYDALCHLELDVPPLSERKEDILHLAYLFIAESNEAFGKQIVGFRNEAGVLLEEA
HHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHEECCCHHHHHHHHCCCCCCCCEEECC
KWPGNLSQLRKTVQNCVLEAQGVYIEKTDAERVLSRLNEEEREDIDLSGTLEEIEKRIIQ
CCCCCHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHH
KIYAEEGNNQTRTAERLGINRTTLWRKLKSSD
HHHHHCCCCCHHHHHHHCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKVMAIAPYEGLKELMVQVAGGENFEFEAASGDLEKGVELAKQAEANGTDLIISRGGTAE
CCEEEECCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCHHH
LIQQEVSIPVVDIEVSGYDMLRVLTLAKGYPGKAAIVGFPMIADGASAVCEILDIRIDAC
HHHHHCCCEEEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHEEEEE
TVSDERDVEPVLLQLKEQGYQIIIGDVITIEKAEQLGLNGLLLTSGKESIAKAFAYAKKL
ECCCCCCCHHHHHHHHHCCCEEEEECEEEEECHHHCCCCEEEEECCHHHHHHHHHHHHHH
YSFLESIKQKYAVPYHILQKAETGYAVYNKTLRPVFQNGVFAEHIGLLDNLEELIGEAEK
HHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
KGVIHFRLRKHGRTWNITGRRFFVSDEALTVFTAENAKDVRVSSLPGATILSPLRMSYME
CCEEEEEEECCCCEEEECCCEEEEECCEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHH
TSRNETMQKVLKKAELFSARREPVWINGAPGSGKESLAGLIHMKGEDKHEPFRKIDAGLL
HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHEEECCCCCCCHHHHHHHHHH
SEAEWEQACESEEFFSGRGTLYIKQVDRMPPSSQRLLLRRISEPYDGPRLIVSSSRRRAE
CHHHHHHHCCCHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEECCHHHHHH
EFSSDLYDALCHLELDVPPLSERKEDILHLAYLFIAESNEAFGKQIVGFRNEAGVLLEEA
HHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHEECCCHHHHHHHHCCCCCCCCEEECC
KWPGNLSQLRKTVQNCVLEAQGVYIEKTDAERVLSRLNEEEREDIDLSGTLEEIEKRIIQ
CCCCCHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHH
KIYAEEGNNQTRTAERLGINRTTLWRKLKSSD
HHHHHCCCCCHHHHHHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA