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The map label for this gene is ygbK [C]

Identifier: 52787384

GI number: 52787384

Start: 3527831

End: 3529102

Strand: Reverse

Name: ygbK [C]

Synonym: BLi03700

Alternate gene names: 52787384

Gene position: 3529102-3527831 (Counterclockwise)

Preceding gene: 52787385

Following gene: 52787383

Centisome position: 83.58

GC content: 52.59

Gene sequence:

>1272_bases
TTGAAAATTGCAATCATCGCGGATGATTTGACGGGAGCGAACGACTGCGGCGGTCAGCTTGTTCATTACGGGATGGATGT
TTCCGTCAAACTCGACGCCGAATTCACCAGACGGGAAACGGAAGGCGTCGTTATTTTCAATACGGACAGCAGATCGCTGC
CAGCCGCAGAGGCGAAGGCGACTGTGAAAAACATCAGTGAACACATCTCCCGGCAATCGTTTGATATCGTCTACAAAAAA
ATCGACAGCACGATGAGAGGAAATATCGGAGCCGAGCTTCAAGCGATGTACGAAGTGTTTCAGCCGGACTTTGTGCTGAT
CGCTCCCGGCTACCCTCAAAACGGACGCCAGGTTATCGGCGGCATCCATTATGTGAACGGCGTAAAGCTTGAAGAAACCG
AAGCGGCAAACGATCCGAAAACGCCTGTAGCCGAGTCGAATATTCAAAGATTAATAGAAAAGCAGACTCGAAATAAGAGC
GGGCATTTATCATATGAAGACATCCGCCGCGGACACGGGCATGTCCGCAACAAGCTGGAACGCTTTCGGGCGGAGGGGAT
TTCATATGTGACGGCCGATTCGGTTCACGAATCCGATCTGCAGGGGCTGGCGCTTATTCTGGAGAGTTTGCCGTATTCTA
TCATTTTGGCCGGTTCGGCAGGCTTGATGAGCTGTCTGCCCAAAGCGTTCAATCTGAAAGAAAGGGAGCTCGGTCAAACC
GTTCCGTCTTCCGACCAGCCGATCATGTTTGTCGTCGGAAGCATGAGTCGGACGGGGAGGGAACAGCTTCACGAACTATT
CGCCGGACGTGCGGCTGAAAAAATTGAAATGAGATCAGAGCGCGTGCTGTGCGGCGGAGCTGAGAAAAGAAACGAGTTCG
AACGGCTGAAGGAAAGGGCGGCGGACGTCCAGCGCCGTTCGAAACACATCGTCCTCTGCACCTCAGACAATGCGGCAGAG
ACACAGAAGATTGGTGAAAGCCGCGGACTCACCCCAGTTCAAACGAGCAATGCGGTGTCCGGTGCACTTGGCGAATTTGC
GGGCGAGCTGATTCAAGCTTTTCATGTGAAACGGCTGTTCTTAACCGGAGGTGACACGGCATATCAAGTGCTGCATCAGC
TTCGGATTCATGAGATACGATTGCTGGACGAAGTAGAGCCCGGCATTCCGCTGGGAGCAGCCGGTGAAGAATTGTACATT
GTGACAAAGGCCGGAAATTTTGGCTCGCGTTCGGTGATGGCAAGTGCGGCAATCAAGCTACAAGGAGGATAA

Upstream 100 bases:

>100_bases
TCAAAAGTGACGCGCCTGCTTCATAACAATCCGAAACCGCTCAGTCTGGAAAATATAAAAGACATCTATCGAAAACTAAT
CAACTAAAGGATGAAGACAT

Downstream 100 bases:

>100_bases
ACAATGAAGAAACCGGTTATCGGCATTACAATGGGCGACGCGGCAGGCGTCGGTCCGGAAATTATCGTAAAAGCCCTCAC
GTCCCGCGAAGTGTATGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MKIAIIADDLTGANDCGGQLVHYGMDVSVKLDAEFTRRETEGVVIFNTDSRSLPAAEAKATVKNISEHISRQSFDIVYKK
IDSTMRGNIGAELQAMYEVFQPDFVLIAPGYPQNGRQVIGGIHYVNGVKLEETEAANDPKTPVAESNIQRLIEKQTRNKS
GHLSYEDIRRGHGHVRNKLERFRAEGISYVTADSVHESDLQGLALILESLPYSIILAGSAGLMSCLPKAFNLKERELGQT
VPSSDQPIMFVVGSMSRTGREQLHELFAGRAAEKIEMRSERVLCGGAEKRNEFERLKERAADVQRRSKHIVLCTSDNAAE
TQKIGESRGLTPVQTSNAVSGALGEFAGELIQAFHVKRLFLTGGDTAYQVLHQLRIHEIRLLDEVEPGIPLGAAGEELYI
VTKAGNFGSRSVMASAAIKLQGG

Sequences:

>Translated_423_residues
MKIAIIADDLTGANDCGGQLVHYGMDVSVKLDAEFTRRETEGVVIFNTDSRSLPAAEAKATVKNISEHISRQSFDIVYKK
IDSTMRGNIGAELQAMYEVFQPDFVLIAPGYPQNGRQVIGGIHYVNGVKLEETEAANDPKTPVAESNIQRLIEKQTRNKS
GHLSYEDIRRGHGHVRNKLERFRAEGISYVTADSVHESDLQGLALILESLPYSIILAGSAGLMSCLPKAFNLKERELGQT
VPSSDQPIMFVVGSMSRTGREQLHELFAGRAAEKIEMRSERVLCGGAEKRNEFERLKERAADVQRRSKHIVLCTSDNAAE
TQKIGESRGLTPVQTSNAVSGALGEFAGELIQAFHVKRLFLTGGDTAYQVLHQLRIHEIRLLDEVEPGIPLGAAGEELYI
VTKAGNFGSRSVMASAAIKLQGG
>Mature_423_residues
MKIAIIADDLTGANDCGGQLVHYGMDVSVKLDAEFTRRETEGVVIFNTDSRSLPAAEAKATVKNISEHISRQSFDIVYKK
IDSTMRGNIGAELQAMYEVFQPDFVLIAPGYPQNGRQVIGGIHYVNGVKLEETEAANDPKTPVAESNIQRLIEKQTRNKS
GHLSYEDIRRGHGHVRNKLERFRAEGISYVTADSVHESDLQGLALILESLPYSIILAGSAGLMSCLPKAFNLKERELGQT
VPSSDQPIMFVVGSMSRTGREQLHELFAGRAAEKIEMRSERVLCGGAEKRNEFERLKERAADVQRRSKHIVLCTSDNAAE
TQKIGESRGLTPVQTSNAVSGALGEFAGELIQAFHVKRLFLTGGDTAYQVLHQLRIHEIRLLDEVEPGIPLGAAGEELYI
VTKAGNFGSRSVMASAAIKLQGG

Specific function: Unknown

COG id: COG3395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygbK [H]

Homologues:

Organism=Escherichia coli, GI1789093, Length=405, Percent_Identity=25.9259259259259, Blast_Score=104, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010737 [H]

Pfam domain/function: PF07005 DUF1537 [H]

EC number: NA

Molecular weight: Translated: 46302; Mature: 46302

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAIIADDLTGANDCGGQLVHYGMDVSVKLDAEFTRRETEGVVIFNTDSRSLPAAEAKA
CEEEEEECCCCCCCCCCCCEEEECCCEEEEECCHHHHCCCCCEEEEECCCCCCCCHHHHH
TVKNISEHISRQSFDIVYKKIDSTMRGNIGAELQAMYEVFQPDFVLIAPGYPQNGRQVIG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHC
GIHYVNGVKLEETEAANDPKTPVAESNIQRLIEKQTRNKSGHLSYEDIRRGHGHVRNKLE
EEEEECCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHH
RFRAEGISYVTADSVHESDLQGLALILESLPYSIILAGSAGLMSCLPKAFNLKERELGQT
HHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCHHHHCCC
VPSSDQPIMFVVGSMSRTGREQLHELFAGRAAEKIEMRSERVLCGGAEKRNEFERLKERA
CCCCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHCCEEEECCCHHHHHHHHHHHHH
ADVQRRSKHIVLCTSDNAAETQKIGESRGLTPVQTSNAVSGALGEFAGELIQAFHVKRLF
HHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEE
LTGGDTAYQVLHQLRIHEIRLLDEVEPGIPLGAAGEELYIVTKAGNFGSRSVMASAAIKL
EECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHEEEEEEE
QGG
CCC
>Mature Secondary Structure
MKIAIIADDLTGANDCGGQLVHYGMDVSVKLDAEFTRRETEGVVIFNTDSRSLPAAEAKA
CEEEEEECCCCCCCCCCCCEEEECCCEEEEECCHHHHCCCCCEEEEECCCCCCCCHHHHH
TVKNISEHISRQSFDIVYKKIDSTMRGNIGAELQAMYEVFQPDFVLIAPGYPQNGRQVIG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHC
GIHYVNGVKLEETEAANDPKTPVAESNIQRLIEKQTRNKSGHLSYEDIRRGHGHVRNKLE
EEEEECCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHH
RFRAEGISYVTADSVHESDLQGLALILESLPYSIILAGSAGLMSCLPKAFNLKERELGQT
HHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCHHHHCCC
VPSSDQPIMFVVGSMSRTGREQLHELFAGRAAEKIEMRSERVLCGGAEKRNEFERLKERA
CCCCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHCCEEEECCCHHHHHHHHHHHHH
ADVQRRSKHIVLCTSDNAAETQKIGESRGLTPVQTSNAVSGALGEFAGELIQAFHVKRLF
HHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEE
LTGGDTAYQVLHQLRIHEIRLLDEVEPGIPLGAAGEELYIVTKAGNFGSRSVMASAAIKL
EECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHEEEEEEE
QGG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]