Click here to switch to the map view.

The map label for this gene is yvmC [H]

Identifier: 52787255

GI number: 52787255

Start: 3411853

End: 3412602

Strand: Direct

Name: yvmC [H]

Synonym: BLi03566

Alternate gene names: 52787255

Gene position: 3411853-3412602 (Clockwise)

Preceding gene: 52787252

Following gene: 52787256

Centisome position: 80.8

GC content: 52.0

Gene sequence:

>750_bases
ATGACAGAGCTTATAATGGAGAGCAAACACCAGCTATTCAAAACCGAAACTCTTACCCAAAACTGCAATGAAATATTAAA
ACGCAGACGCCATGTTCTCGTCGGCATCAGCCCGTTTAACAGCCGATTTTCCGAAGATTATATTCATCGGCTTATCGCCT
GGGCCGTCCGTGAGTTTCAGAGTGTATCCGTGCTTTTGGCGGGAAAGGAAGCTGCCAACCTTCTCGAAGCGCTCGGCACC
CCACATGGGAAGGCCGAACGGAAAGTCAGGAAAGAAGTCTCGCGGAACCGGAGATTCGCTGAAAAGGCGTTGGAAGCGCA
TGGCGGAAATCCCGAGGACATCCATACATTTTCCGATTTCGCGAACCAGACCGCATACCGGAATTTGCGGATGGAAGTCG
AAGCTGCCTTTTTCGACCAGACGCATTTTCGCAATGCCTGCCTGGAGATGTCGCATGCGGCTATCCTCGGACGGGCCCGG
GGCACTCGGATGGATGTCGTGGAAGTCAGCGCAGACATGCTGGAGCTGGCTGTTGAATACGTCATCGCTGAACTTCCGTT
TTTCATCGCCGCCCCTGATATTTTAGGCGTCGAAGAGACGCTTCTTGCTTATCACCGGCCATGGAAGCTCGGCGAACAGA
TCTCCCGTAATGAATTTGCCGTCAAAATGCGGCCGAATCAAGGATATCTCATGGTTTCCGAAGCGGACGAAAGGGTGGAA
TCTAAAAGCATGCAGGAGGAACGAGTATGA

Upstream 100 bases:

>100_bases
CATCACGAAGTGAGACCAGCCTATTCCCAGCTCGATAAGCCGCACGTATCCATCATTGATTGCAAATGAAGTCACTCTAT
GTCCGTTAAGGAGGAAATCA

Downstream 100 bases:

>100_bases
ATCAATCGCTAAAAACATTCAGCGTGTTGTCAGAACAATATCACGAAAATCCGTATCAGTATTTCTCATACCTTCGGGAA
TCTGATCCCGTCCATTATGA

Product: YvmC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MTELIMESKHQLFKTETLTQNCNEILKRRRHVLVGISPFNSRFSEDYIHRLIAWAVREFQSVSVLLAGKEAANLLEALGT
PHGKAERKVRKEVSRNRRFAEKALEAHGGNPEDIHTFSDFANQTAYRNLRMEVEAAFFDQTHFRNACLEMSHAAILGRAR
GTRMDVVEVSADMLELAVEYVIAELPFFIAAPDILGVEETLLAYHRPWKLGEQISRNEFAVKMRPNQGYLMVSEADERVE
SKSMQEERV

Sequences:

>Translated_249_residues
MTELIMESKHQLFKTETLTQNCNEILKRRRHVLVGISPFNSRFSEDYIHRLIAWAVREFQSVSVLLAGKEAANLLEALGT
PHGKAERKVRKEVSRNRRFAEKALEAHGGNPEDIHTFSDFANQTAYRNLRMEVEAAFFDQTHFRNACLEMSHAAILGRAR
GTRMDVVEVSADMLELAVEYVIAELPFFIAAPDILGVEETLLAYHRPWKLGEQISRNEFAVKMRPNQGYLMVSEADERVE
SKSMQEERV
>Mature_248_residues
TELIMESKHQLFKTETLTQNCNEILKRRRHVLVGISPFNSRFSEDYIHRLIAWAVREFQSVSVLLAGKEAANLLEALGTP
HGKAERKVRKEVSRNRRFAEKALEAHGGNPEDIHTFSDFANQTAYRNLRMEVEAAFFDQTHFRNACLEMSHAAILGRARG
TRMDVVEVSADMLELAVEYVIAELPFFIAAPDILGVEETLLAYHRPWKLGEQISRNEFAVKMRPNQGYLMVSEADERVES
KSMQEERV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28550; Mature: 28419

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTELIMESKHQLFKTETLTQNCNEILKRRRHVLVGISPFNSRFSEDYIHRLIAWAVREFQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHH
SVSVLLAGKEAANLLEALGTPHGKAERKVRKEVSRNRRFAEKALEAHGGNPEDIHTFSDF
HHHHEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
ANQTAYRNLRMEVEAAFFDQTHFRNACLEMSHAAILGRARGTRMDVVEVSADMLELAVEY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHH
VIAELPFFIAAPDILGVEETLLAYHRPWKLGEQISRNEFAVKMRPNQGYLMVSEADERVE
HHHHCCHHHCCCCCCCHHHHHHHHCCCHHHHHHHCCCCEEEEECCCCCEEEEECHHHHHH
SKSMQEERV
HHHHHHCCC
>Mature Secondary Structure 
TELIMESKHQLFKTETLTQNCNEILKRRRHVLVGISPFNSRFSEDYIHRLIAWAVREFQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHH
SVSVLLAGKEAANLLEALGTPHGKAERKVRKEVSRNRRFAEKALEAHGGNPEDIHTFSDF
HHHHEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
ANQTAYRNLRMEVEAAFFDQTHFRNACLEMSHAAILGRARGTRMDVVEVSADMLELAVEY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHH
VIAELPFFIAAPDILGVEETLLAYHRPWKLGEQISRNEFAVKMRPNQGYLMVSEADERVE
HHHHCCHHHCCCCCCCHHHHHHHHCCCHHHHHHHCCCCEEEEECCCCCEEEEECHHHHHH
SKSMQEERV
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]