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The map label for this gene is yfhI [H]

Identifier: 52787252

GI number: 52787252

Start: 3408869

End: 3409987

Strand: Direct

Name: yfhI [H]

Synonym: BLi03562

Alternate gene names: 52787252

Gene position: 3408869-3409987 (Clockwise)

Preceding gene: 52787242

Following gene: 52787255

Centisome position: 80.73

GC content: 51.47

Gene sequence:

>1119_bases
ATGAAAAAAACACTGCACGCTCCAGTCAAACTGATCATCGCAATTTTTATGATTTGTACATTTTCCATCGGCTTTACAGA
GTACGTCGTTATGGGTATATTGACTTCCATTTCAAAGGATCTCTCTGTTCCGATTTCGTCTACCGGCCTATTGGTAACGG
CATATGCGGGAAGCGTCTGTCTGACGGGGCCGATCGTCACCATATTTTCGGTAAAAATGCCGCGCAAACCGGTATTGATC
GGCTTGATGAGTGTGTTTGTACTGTCGAATGCGCTCAGTTTCCTGGCGCCGAACTTCACCATTTTGTTGGTCTCAAGAAT
CCTATCCGCATCCATTCATGGTGCATTTTTTGCAACGACAATGGTGTTCGTCAGCGAAATGGCACCGCCCGAAAAACGGG
CCGCCGCTGCCGCTTCAATGAACGGCGGCTTGACCATCGCCCTGATGCTCGGCGTCCCGTTTGGTTCTTATTTAGGCGAT
CTTTTCAACTGGCGGATCGTTTTTCTGATGATCGCATGCCTCGGATTGATCGGCCTCGCCGGCATTTGGCTGACGGTGCC
GCACAGAAAACCGAAAGTTGTCCCTAAATTGATCCATGAATGGGATGTGTTTAAAAATAAACAAGTCCTTTTTTCTTTTG
CTATCACGATCTTTGGCTATTCGGGCGTATTCATCGCCTACACGTTTATTGAACCGATGCTGCGGCATTCTGCCGGTTTC
GACAGTCTCGGCATTACAGCCGCCCTTTTCGCCTACGGGTTTGGCGGGGTCGTCGGCAATTTCTACGCCGGAAAGGTGCC
GTTTCACCTGTTAACCCGCTCCATGATCGGGGTGATGATCGCGCTCATGGCGATCCTTGCGGCCTTTCCTTTTGTCAGCG
GACATCCTGCCGGCGCCATCATCGTGACGTTTTTATTCGGAGCCGGCGCGTTCGCGTTCGGAACGGTGCCCCTTTTGCAA
ACAAAGGTCGTGGCTGCGTCTGAACACGGAACAACGATCGCCACCTCCGTCAGCATCGCTGCATTTAACTTGGCCAACGC
GCTCGGGGCTTGGATCGGCGGACTCATTCTTAATGCATCAGAGTCTACACATACCTTGCCACAGGCGGTGCGCTTATGA

Upstream 100 bases:

>100_bases
ATACCGTTTGGGGGAACATATTGATGCGCAAAAAACGGTTGAAATTCGTCTTTTGATCTTTTAATATATAAACTCATGTT
TTTTAAAAGGAGGGGTCAGG

Downstream 100 bases:

>100_bases
CCATGTGCGGGCTGACGCTTACGATGTTCGCCTATATGTCTGAGAAAAGACAAGTGAAAGAAGACATGTGGGGAACGGAC
CTGTAATCAAAAAGCTGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MKKTLHAPVKLIIAIFMICTFSIGFTEYVVMGILTSISKDLSVPISSTGLLVTAYAGSVCLTGPIVTIFSVKMPRKPVLI
GLMSVFVLSNALSFLAPNFTILLVSRILSASIHGAFFATTMVFVSEMAPPEKRAAAAASMNGGLTIALMLGVPFGSYLGD
LFNWRIVFLMIACLGLIGLAGIWLTVPHRKPKVVPKLIHEWDVFKNKQVLFSFAITIFGYSGVFIAYTFIEPMLRHSAGF
DSLGITAALFAYGFGGVVGNFYAGKVPFHLLTRSMIGVMIALMAILAAFPFVSGHPAGAIIVTFLFGAGAFAFGTVPLLQ
TKVVAASEHGTTIATSVSIAAFNLANALGAWIGGLILNASESTHTLPQAVRL

Sequences:

>Translated_372_residues
MKKTLHAPVKLIIAIFMICTFSIGFTEYVVMGILTSISKDLSVPISSTGLLVTAYAGSVCLTGPIVTIFSVKMPRKPVLI
GLMSVFVLSNALSFLAPNFTILLVSRILSASIHGAFFATTMVFVSEMAPPEKRAAAAASMNGGLTIALMLGVPFGSYLGD
LFNWRIVFLMIACLGLIGLAGIWLTVPHRKPKVVPKLIHEWDVFKNKQVLFSFAITIFGYSGVFIAYTFIEPMLRHSAGF
DSLGITAALFAYGFGGVVGNFYAGKVPFHLLTRSMIGVMIALMAILAAFPFVSGHPAGAIIVTFLFGAGAFAFGTVPLLQ
TKVVAASEHGTTIATSVSIAAFNLANALGAWIGGLILNASESTHTLPQAVRL
>Mature_372_residues
MKKTLHAPVKLIIAIFMICTFSIGFTEYVVMGILTSISKDLSVPISSTGLLVTAYAGSVCLTGPIVTIFSVKMPRKPVLI
GLMSVFVLSNALSFLAPNFTILLVSRILSASIHGAFFATTMVFVSEMAPPEKRAAAAASMNGGLTIALMLGVPFGSYLGD
LFNWRIVFLMIACLGLIGLAGIWLTVPHRKPKVVPKLIHEWDVFKNKQVLFSFAITIFGYSGVFIAYTFIEPMLRHSAGF
DSLGITAALFAYGFGGVVGNFYAGKVPFHLLTRSMIGVMIALMAILAAFPFVSGHPAGAIIVTFLFGAGAFAFGTVPLLQ
TKVVAASEHGTTIATSVSIAAFNLANALGAWIGGLILNASESTHTLPQAVRL

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=325, Percent_Identity=35.0769230769231, Blast_Score=186, Evalue=2e-48,
Organism=Escherichia coli, GI1786595, Length=352, Percent_Identity=30.1136363636364, Blast_Score=165, Evalue=4e-42,
Organism=Escherichia coli, GI1787808, Length=225, Percent_Identity=30.2222222222222, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI145693198, Length=342, Percent_Identity=24.8538011695906, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 39434; Mature: 39434

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: PS00191 CYTOCHROME_B5_1 ; PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLHAPVKLIIAIFMICTFSIGFTEYVVMGILTSISKDLSVPISSTGLLVTAYAGSVC
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCC
LTGPIVTIFSVKMPRKPVLIGLMSVFVLSNALSFLAPNFTILLVSRILSASIHGAFFATT
CCCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
MVFVSEMAPPEKRAAAAASMNGGLTIALMLGVPFGSYLGDLFNWRIVFLMIACLGLIGLA
HHHHHHCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GIWLTVPHRKPKVVPKLIHEWDVFKNKQVLFSFAITIFGYSGVFIAYTFIEPMLRHSAGF
HHHEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
DSLGITAALFAYGFGGVVGNFYAGKVPFHLLTRSMIGVMIALMAILAAFPFVSGHPAGAI
CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
IVTFLFGAGAFAFGTVPLLQTKVVAASEHGTTIATSVSIAAFNLANALGAWIGGLILNAS
HHHHHHHCCHHHHCCHHHHHHHHEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHEECC
ESTHTLPQAVRL
CCCHHCHHHHCC
>Mature Secondary Structure
MKKTLHAPVKLIIAIFMICTFSIGFTEYVVMGILTSISKDLSVPISSTGLLVTAYAGSVC
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCC
LTGPIVTIFSVKMPRKPVLIGLMSVFVLSNALSFLAPNFTILLVSRILSASIHGAFFATT
CCCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
MVFVSEMAPPEKRAAAAASMNGGLTIALMLGVPFGSYLGDLFNWRIVFLMIACLGLIGLA
HHHHHHCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GIWLTVPHRKPKVVPKLIHEWDVFKNKQVLFSFAITIFGYSGVFIAYTFIEPMLRHSAGF
HHHEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
DSLGITAALFAYGFGGVVGNFYAGKVPFHLLTRSMIGVMIALMAILAAFPFVSGHPAGAI
CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
IVTFLFGAGAFAFGTVPLLQTKVVAASEHGTTIATSVSIAAFNLANALGAWIGGLILNAS
HHHHHHHCCHHHHCCHHHHHHHHEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHEECC
ESTHTLPQAVRL
CCCHHCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]