Click here to switch to the map view.

The map label for this gene is pucR [H]

Identifier: 52787128

GI number: 52787128

Start: 3280006

End: 3281604

Strand: Direct

Name: pucR [H]

Synonym: BLi03436

Alternate gene names: 52787128

Gene position: 3280006-3281604 (Clockwise)

Preceding gene: 52787124

Following gene: 52787131

Centisome position: 77.68

GC content: 48.66

Gene sequence:

>1599_bases
ATGAATATCTATGACATGATGAAACTCCCTGTATTTAAAGGCGCAACGCTTGCCGCTGGAAAGGCGGGCGTAACCCGGAA
CATTGAACACATCAATATGATGGATGCGCCAGATATTGCCGATTATCTGCATCATGGCGAACTCCTCGTCACGACCGCAT
ACCATTTAAAAGACCGGCCTTTTTTATTGAAGGAATTGATTGAAAGGATGATCAGGCGGGGCTGCGCCGGACTCGGTATC
AAAACCCGCTTTTTGCAGGAAATACCCGACGAGGTGATCAAGCTTGCCGACGAGCGGACATTTCCGATCATCGAGCTAAA
TGAAGATGTCCGCCTCGGTGATATTGTCAATCATACACTGAGCCATATTCTAGACAAACGGACGGCAGAACTCGAACAGG
CCATCGCCGCTCAAAAAAAGTTCACAAGCCATATTATGAGCGGAAAAAGCATTCAATCGCTCTTGCATAACGTCTCTGCT
GTTTTAAAGCTTCCCGTTCTTCTATTCAATCAGCACCTCAAGCCGATTGCCTCCTCAAAAGCAGATGCCGCCGGGACGCT
GTCGGATTATGAAGGAATATTTCAAAAAGGAAACAGAACGGGGCTCACCTGTTTTTCAACGATTCCCGACAAACAAACCT
ATTCGGTATTTCCGATCTATACTCATGAAAAAAAATGCGGCTTCCTCGTTGTCTGCGGGATGATTTCCCCTTCAGACAAA
GGCTTGCTGTTAACCCTCGAACAAGCCGCCAATGTCATCGCCTTTGAGCTGCTGAAGGAAAATGCGCTCAAACAATATTT
GCGAAGAGCGCGGAACGAGTTTTTCAGAAATTTTTTGGACGGCGCCTTTTCCTCTGCTGAAGAAATTAAAAACCGAGCAA
AAGAATTTCAGCTCAAGTGGGATCAAAAATATGTGTGCATCGCCGGCAAATTGGACCGCCGCGAAAAATCGCTCAGCTTC
ACGGAAAATCAGCTTGAATCAGATTCCGTGTTCGAACGCCTGGAAGAAGAGCTGGTTGACTTCCCGTTTCCTCCGCACCT
TTTCACAAAAGGAAACATATGCTTCCTGCTGGCCGAGGCGACGGACAGCTGGGCTGAAATGAATGCAGCCGTGGGCGGAT
TTTTAAAGGCGTTTCAGCGCCATGCATCTGAGCATTTTCAGCGGACGATTTCTTTTGGAATCAGCAACCTCAGCCATCAG
CTGAGAGACGTTCCGCACATTTGCAAAGAAGCCGTCGATGCGCTCCACTCCGGCCATTTGTCAGGCAGCACCGAGTTCAT
CCAGACGTACCATATGAAAGACGTGTCAGAGCTTTTGCGCATGATTCCGGCTGATGATTTGAAGACATTTTACACGCATG
CGCTGCATCAGCTTGCCAGCCTGCCGAAGGATGACCCAGGGCTCCTGCAAACATTGTCCGTCTATCTGGAAACGCACTGT
CAGATTTCTGAAACGGCCAAGCGCCTGTACATCCACAGAAACACCGTCATCTACAGGCTTGAAAAATGCGAGGAACTGCT
CGGGAAAAGCCTGAAAGATGCGGACACGACCTTGCGCTTGAGACTCGCGCTCAGAATTCAAATGCTGCTTGGGTTGTGA

Upstream 100 bases:

>100_bases
TTACTGGTAACATGAAAAATAAACATCGGCATAAATGTCACAAATCCGCTCATTTTTTGTTGAAAATGACTAAAATGACA
AAGGAGGCCTGTACAGATCA

Downstream 100 bases:

>100_bases
GAAATCCCTTCCCCGCGGCAATCGGAGGATGTAAAGCCGCGCCGGCATATTTGATGATTTGAGCATTTCACCATAAAAAA
GCCGGCATATGTGCCGGCTC

Product: PucR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 532; Mature: 532

Protein sequence:

>532_residues
MNIYDMMKLPVFKGATLAAGKAGVTRNIEHINMMDAPDIADYLHHGELLVTTAYHLKDRPFLLKELIERMIRRGCAGLGI
KTRFLQEIPDEVIKLADERTFPIIELNEDVRLGDIVNHTLSHILDKRTAELEQAIAAQKKFTSHIMSGKSIQSLLHNVSA
VLKLPVLLFNQHLKPIASSKADAAGTLSDYEGIFQKGNRTGLTCFSTIPDKQTYSVFPIYTHEKKCGFLVVCGMISPSDK
GLLLTLEQAANVIAFELLKENALKQYLRRARNEFFRNFLDGAFSSAEEIKNRAKEFQLKWDQKYVCIAGKLDRREKSLSF
TENQLESDSVFERLEEELVDFPFPPHLFTKGNICFLLAEATDSWAEMNAAVGGFLKAFQRHASEHFQRTISFGISNLSHQ
LRDVPHICKEAVDALHSGHLSGSTEFIQTYHMKDVSELLRMIPADDLKTFYTHALHQLASLPKDDPGLLQTLSVYLETHC
QISETAKRLYIHRNTVIYRLEKCEELLGKSLKDADTTLRLRLALRIQMLLGL

Sequences:

>Translated_532_residues
MNIYDMMKLPVFKGATLAAGKAGVTRNIEHINMMDAPDIADYLHHGELLVTTAYHLKDRPFLLKELIERMIRRGCAGLGI
KTRFLQEIPDEVIKLADERTFPIIELNEDVRLGDIVNHTLSHILDKRTAELEQAIAAQKKFTSHIMSGKSIQSLLHNVSA
VLKLPVLLFNQHLKPIASSKADAAGTLSDYEGIFQKGNRTGLTCFSTIPDKQTYSVFPIYTHEKKCGFLVVCGMISPSDK
GLLLTLEQAANVIAFELLKENALKQYLRRARNEFFRNFLDGAFSSAEEIKNRAKEFQLKWDQKYVCIAGKLDRREKSLSF
TENQLESDSVFERLEEELVDFPFPPHLFTKGNICFLLAEATDSWAEMNAAVGGFLKAFQRHASEHFQRTISFGISNLSHQ
LRDVPHICKEAVDALHSGHLSGSTEFIQTYHMKDVSELLRMIPADDLKTFYTHALHQLASLPKDDPGLLQTLSVYLETHC
QISETAKRLYIHRNTVIYRLEKCEELLGKSLKDADTTLRLRLALRIQMLLGL
>Mature_532_residues
MNIYDMMKLPVFKGATLAAGKAGVTRNIEHINMMDAPDIADYLHHGELLVTTAYHLKDRPFLLKELIERMIRRGCAGLGI
KTRFLQEIPDEVIKLADERTFPIIELNEDVRLGDIVNHTLSHILDKRTAELEQAIAAQKKFTSHIMSGKSIQSLLHNVSA
VLKLPVLLFNQHLKPIASSKADAAGTLSDYEGIFQKGNRTGLTCFSTIPDKQTYSVFPIYTHEKKCGFLVVCGMISPSDK
GLLLTLEQAANVIAFELLKENALKQYLRRARNEFFRNFLDGAFSSAEEIKNRAKEFQLKWDQKYVCIAGKLDRREKSLSF
TENQLESDSVFERLEEELVDFPFPPHLFTKGNICFLLAEATDSWAEMNAAVGGFLKAFQRHASEHFQRTISFGISNLSHQ
LRDVPHICKEAVDALHSGHLSGSTEFIQTYHMKDVSELLRMIPADDLKTFYTHALHQLASLPKDDPGLLQTLSVYLETHC
QISETAKRLYIHRNTVIYRLEKCEELLGKSLKDADTTLRLRLALRIQMLLGL

Specific function: Activates the expression of pucFG, pucH, pucI, pucJKLM and guaD, while it represses pucABCDE and its own expression [H]

COG id: COG2508

COG function: function code TQ; Regulator of polyketide synthase expression

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CdaR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012914 [H]

Pfam domain/function: PF07905 PucR [H]

EC number: NA

Molecular weight: Translated: 60301; Mature: 60301

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIYDMMKLPVFKGATLAAGKAGVTRNIEHINMMDAPDIADYLHHGELLVTTAYHLKDRP
CCHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHCCCEEEEEHHHHCCCC
FLLKELIERMIRRGCAGLGIKTRFLQEIPDEVIKLADERTFPIIELNEDVRLGDIVNHTL
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHH
SHILDKRTAELEQAIAAQKKFTSHIMSGKSIQSLLHNVSAVLKLPVLLFNQHLKPIASSK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ADAAGTLSDYEGIFQKGNRTGLTCFSTIPDKQTYSVFPIYTHEKKCGFLVVCGMISPSDK
CCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCC
GLLLTLEQAANVIAFELLKENALKQYLRRARNEFFRNFLDGAFSSAEEIKNRAKEFQLKW
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCEEC
DQKYVCIAGKLDRREKSLSFTENQLESDSVFERLEEELVDFPFPPHLFTKGNICFLLAEA
CCEEEEEECCCCHHHHHCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECC
TDSWAEMNAAVGGFLKAFQRHASEHFQRTISFGISNLSHQLRDVPHICKEAVDALHSGHL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SGSTEFIQTYHMKDVSELLRMIPADDLKTFYTHALHQLASLPKDDPGLLQTLSVYLETHC
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
QISETAKRLYIHRNTVIYRLEKCEELLGKSLKDADTTLRLRLALRIQMLLGL
CHHHHHHHHHEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIYDMMKLPVFKGATLAAGKAGVTRNIEHINMMDAPDIADYLHHGELLVTTAYHLKDRP
CCHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHCCCEEEEEHHHHCCCC
FLLKELIERMIRRGCAGLGIKTRFLQEIPDEVIKLADERTFPIIELNEDVRLGDIVNHTL
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHH
SHILDKRTAELEQAIAAQKKFTSHIMSGKSIQSLLHNVSAVLKLPVLLFNQHLKPIASSK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ADAAGTLSDYEGIFQKGNRTGLTCFSTIPDKQTYSVFPIYTHEKKCGFLVVCGMISPSDK
CCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCC
GLLLTLEQAANVIAFELLKENALKQYLRRARNEFFRNFLDGAFSSAEEIKNRAKEFQLKW
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCEEC
DQKYVCIAGKLDRREKSLSFTENQLESDSVFERLEEELVDFPFPPHLFTKGNICFLLAEA
CCEEEEEECCCCHHHHHCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECC
TDSWAEMNAAVGGFLKAFQRHASEHFQRTISFGISNLSHQLRDVPHICKEAVDALHSGHL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SGSTEFIQTYHMKDVSELLRMIPADDLKTFYTHALHQLASLPKDDPGLLQTLSVYLETHC
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
QISETAKRLYIHRNTVIYRLEKCEELLGKSLKDADTTLRLRLALRIQMLLGL
CHHHHHHHHHEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 11344136; 12029039 [H]