Click here to switch to the map view.

The map label for this gene is yrzC [H]

Identifier: 52786611

GI number: 52786611

Start: 2766677

End: 2767093

Strand: Reverse

Name: yrzC [H]

Synonym: BLi02877

Alternate gene names: 52786611

Gene position: 2767093-2766677 (Counterclockwise)

Preceding gene: 52786613

Following gene: 52786610

Centisome position: 65.53

GC content: 50.6

Gene sequence:

>417_bases
TTGAAAATATCAACTAAAGGCAGATACGGGCTGACGATTATGATTGAGCTTGCGAAAAAGCATGGGGAAGGCCCGACTTC
TTTGAAAAGTATTGCTCAGACAAACGATTTATCGGAACATTATTTGGAACAGCTTGTTTCACCTTTGCGGAACGCCGGGC
TTGTGAAAAGCATTCGCGGGGCCTACGGCGGCTACATTCTTGGTGAGGAGCCTGCGGCGATTACGGCGGGCGATATCATT
CGCGTCCTGGAAGGGCCGATCAGCCCGGTGGAAGTGCTTGAAAATGAGGAGCCGGCAAAGCGCGAACTGTGGATCAAGAT
TCGCGATGCTGTCAAGGAAGTGCTGGACTCCACGACGCTTGAAGACTTGGCCAGCTATACAGAGGGCGAGCAGGAAGCGT
ATATGTTTTACATTTAA

Upstream 100 bases:

>100_bases
GTGTGAAAGGAGACTCGGCTAAGGTCTTTCGCGTCCTGCGAAAAACGCCGAGTACCTTCGTCCTGAAGGCATGATTTATT
ATAGGTTAGAGGTGTTTATT

Downstream 100 bases:

>100_bases
GATCGAGGTGTAATGGTAGGATGGAACGGATTTACTTAGACCATGCAGCGACTTCTCCGACTGACCCCCGGGTAGTGGAA
AAAATGCTGCCTTACTTAAC

Product: YrzC

Products: NA

Alternate protein names: Cysteine metabolism repressor [H]

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MKISTKGRYGLTIMIELAKKHGEGPTSLKSIAQTNDLSEHYLEQLVSPLRNAGLVKSIRGAYGGYILGEEPAAITAGDII
RVLEGPISPVEVLENEEPAKRELWIKIRDAVKEVLDSTTLEDLASYTEGEQEAYMFYI

Sequences:

>Translated_138_residues
MKISTKGRYGLTIMIELAKKHGEGPTSLKSIAQTNDLSEHYLEQLVSPLRNAGLVKSIRGAYGGYILGEEPAAITAGDII
RVLEGPISPVEVLENEEPAKRELWIKIRDAVKEVLDSTTLEDLASYTEGEQEAYMFYI
>Mature_138_residues
MKISTKGRYGLTIMIELAKKHGEGPTSLKSIAQTNDLSEHYLEQLVSPLRNAGLVKSIRGAYGGYILGEEPAAITAGDII
RVLEGPISPVEVLENEEPAKRELWIKIRDAVKEVLDSTTLEDLASYTEGEQEAYMFYI

Specific function: Master repressor of cysteine metabolism in B.subtilis. Controls the expression of genes involved either in cysteine synthesis from sulfide (cysK), sulfonates (ssu), or methionine (mccAB) or in cystine uptake (tcyP). Activity of CymR is positively regulate

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=134, Percent_Identity=32.089552238806, Blast_Score=79, Evalue=1e-16,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 15254; Mature: 15254

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISTKGRYGLTIMIELAKKHGEGPTSLKSIAQTNDLSEHYLEQLVSPLRNAGLVKSIRG
CCCCCCCCCCHHHHEEEHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHH
AYGGYILGEEPAAITAGDIIRVLEGPISPVEVLENEEPAKRELWIKIRDAVKEVLDSTTL
HHCCEEECCCCCEECHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCH
EDLASYTEGEQEAYMFYI
HHHHHHCCCCCCEEEEEC
>Mature Secondary Structure
MKISTKGRYGLTIMIELAKKHGEGPTSLKSIAQTNDLSEHYLEQLVSPLRNAGLVKSIRG
CCCCCCCCCCHHHHEEEHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHH
AYGGYILGEEPAAITAGDIIRVLEGPISPVEVLENEEPAKRELWIKIRDAVKEVLDSTTL
HHCCEEECCCCCEECHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCH
EDLASYTEGEQEAYMFYI
HHHHHHCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]