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The map label for this gene is yrrD [H]

Identifier: 52786606

GI number: 52786606

Start: 2760549

End: 2761013

Strand: Reverse

Name: yrrD [H]

Synonym: BLi02872

Alternate gene names: 52786606

Gene position: 2761013-2760549 (Counterclockwise)

Preceding gene: 52786607

Following gene: 52786605

Centisome position: 65.39

GC content: 47.31

Gene sequence:

>465_bases
TTGAGAACATGCAATGAGCTGGAAGGACTCAATGTTTACGACAGACAGTCTTCTCTCCCGCTTGGGGTGGTAACGGATAT
CTGTTTTTCTCACGAAGGGACATGTCTCGGATTGATTATGGAAGAGAAGCGGCGCTTTTACAATCCCCGTTCGCTTCTTC
CGCTTCCCGCGGTCACCGAAATCGGACGTGACGGCGTATACGTTGATTTCACCGAGTTCAAGCCGATGCAAGTTCCGAAG
CAGAGTCTTTCTTATGACCAGATGAAGCAAAAAATGGTCAAAAACGGAGCAGGAGATACGCTGGGCATGCTGGAAGATGT
ATACTTTTCTTCCGACACGGGCATAATCGTAGCATATGAACTATCAGACGGTTTTTTTGCCGATTTGTCAGGCGACAAAA
AGCAGATTCACTCATCTGGGGAACCGCTTGAAGTAGGCAGAAGCACAATCGTCTTGAACGAATAA

Upstream 100 bases:

>100_bases
GAAGCAGAATAAGTGTTTTTCATGGAATCCATTTCATCGTATGAGTCGCGGCGCAACAGCAGATCATAAGAGTGTTCGTA
AAAAGGTGGTTGATCACACT

Downstream 100 bases:

>100_bases
GAGGTGTGTGTTCAAATGCTCGTTTGCCCGAATTGCAAAAGCAAAAACATCGGCAAAATCGGTGTAAATCAATATTACTG
CTGGGGATGCTTTATTGAGC

Product: YrrD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MRTCNELEGLNVYDRQSSLPLGVVTDICFSHEGTCLGLIMEEKRRFYNPRSLLPLPAVTEIGRDGVYVDFTEFKPMQVPK
QSLSYDQMKQKMVKNGAGDTLGMLEDVYFSSDTGIIVAYELSDGFFADLSGDKKQIHSSGEPLEVGRSTIVLNE

Sequences:

>Translated_154_residues
MRTCNELEGLNVYDRQSSLPLGVVTDICFSHEGTCLGLIMEEKRRFYNPRSLLPLPAVTEIGRDGVYVDFTEFKPMQVPK
QSLSYDQMKQKMVKNGAGDTLGMLEDVYFSSDTGIIVAYELSDGFFADLSGDKKQIHSSGEPLEVGRSTIVLNE
>Mature_154_residues
MRTCNELEGLNVYDRQSSLPLGVVTDICFSHEGTCLGLIMEEKRRFYNPRSLLPLPAVTEIGRDGVYVDFTEFKPMQVPK
QSLSYDQMKQKMVKNGAGDTLGMLEDVYFSSDTGIIVAYELSDGFFADLSGDKKQIHSSGEPLEVGRSTIVLNE

Specific function: Unknown

COG id: COG3881

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007903
- InterPro:   IPR011033 [H]

Pfam domain/function: PF05239 PRC [H]

EC number: NA

Molecular weight: Translated: 17168; Mature: 17168

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTCNELEGLNVYDRQSSLPLGVVTDICFSHEGTCLGLIMEEKRRFYNPRSLLPLPAVTE
CCCCCCCCCCCEECCCCCCCHHHHHHHHHCCCCCEEEEEEHHHHHHCCCCCCCCCCHHHH
IGRDGVYVDFTEFKPMQVPKQSLSYDQMKQKMVKNGAGDTLGMLEDVYFSSDTGIIVAYE
CCCCCEEEECCCCCCCCCCHHHCCHHHHHHHHHHCCCCCHHHHHHHHEECCCCCEEEEEE
LSDGFFADLSGDKKQIHSSGEPLEVGRSTIVLNE
CCCCEEECCCCCHHHHHCCCCCEECCCEEEEEEC
>Mature Secondary Structure
MRTCNELEGLNVYDRQSSLPLGVVTDICFSHEGTCLGLIMEEKRRFYNPRSLLPLPAVTE
CCCCCCCCCCCEECCCCCCCHHHHHHHHHCCCCCEEEEEEHHHHHHCCCCCCCCCCHHHH
IGRDGVYVDFTEFKPMQVPKQSLSYDQMKQKMVKNGAGDTLGMLEDVYFSSDTGIIVAYE
CCCCCEEEECCCCCCCCCCHHHCCHHHHHHHHHHCCCCCHHHHHHHHEECCCCCEEEEEE
LSDGFFADLSGDKKQIHSSGEPLEVGRSTIVLNE
CCCCEEECCCCCHHHHHCCCCCEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]