Click here to switch to the map view.

The map label for this gene is yidD [C]

Identifier: 52786537

GI number: 52786537

Start: 2687758

End: 2688003

Strand: Reverse

Name: yidD [C]

Synonym: BLi02802

Alternate gene names: 52786537

Gene position: 2688003-2687758 (Counterclockwise)

Preceding gene: 52786538

Following gene: 52786536

Centisome position: 63.66

GC content: 43.09

Gene sequence:

>246_bases
ATGAAACGGGCAGCGATCATATTCATTCGATTCTACCAAAAGGCGATATCCCCTCTTTTCCCGCCGACTTGCAGATTTTA
TCCAACATGCTCCAACTATGGGCTTGAAGCGATTCAAAGGTTCGGGTTTATCAAAGGCAGTTATCTGCTTATTAAACGAT
TACTGAAATGCCACCCTCTTCATCCGGGAGGCTTTGATCCTGTTCCAAACCAAACAGATCAAAAAAAGGAAGGGGATTCA
GATTAA

Upstream 100 bases:

>100_bases
ATACAGTGTTGGAAAGCATGCTTGCGATGAAGAGGGCCGGTGCGGATCTTATTGTTACATATTTTGCAAAAGATATAGCA
AAATTTCTTCGGGAGGAATC

Downstream 100 bases:

>100_bases
TATTGTAGGATGATCTATTGATCGTTTTTCCTTGCAGGGCAGGCAGGGGAAGTTGACCGCTTTCCTGAAGAACTCCTGCA
CATTCAAAGCAGTAAATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 81

Protein sequence:

>81_residues
MKRAAIIFIRFYQKAISPLFPPTCRFYPTCSNYGLEAIQRFGFIKGSYLLIKRLLKCHPLHPGGFDPVPNQTDQKKEGDS
D

Sequences:

>Translated_81_residues
MKRAAIIFIRFYQKAISPLFPPTCRFYPTCSNYGLEAIQRFGFIKGSYLLIKRLLKCHPLHPGGFDPVPNQTDQKKEGDS
D
>Mature_81_residues
MKRAAIIFIRFYQKAISPLFPPTCRFYPTCSNYGLEAIQRFGFIKGSYLLIKRLLKCHPLHPGGFDPVPNQTDQKKEGDS
D

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family

Homologues:

Organism=Escherichia coli, GI87082322, Length=76, Percent_Identity=61.8421052631579, Blast_Score=102, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y5278_BACLD (Q65GZ1)

Other databases:

- EMBL:   AE017333
- EMBL:   CP000002
- RefSeq:   YP_079945.1
- RefSeq:   YP_092366.1
- STRING:   Q65GZ1
- EnsemblBacteria:   EBBACT00000054789
- EnsemblBacteria:   EBBACT00000059663
- GeneID:   3027760
- GeneID:   3097960
- GenomeReviews:   AE017333_GR
- GenomeReviews:   CP000002_GR
- KEGG:   bld:BLi02802
- KEGG:   bli:BL05278
- NMPDR:   fig|279010.5.peg.3094
- eggNOG:   COG0759
- GeneTree:   EBGT00050000001814
- HOGENOM:   HBG634291
- OMA:   LLIKIYQ
- ProtClustDB:   CLSK737598
- BioCyc:   BLIC279010-1:BLI02802-MONOMER
- BioCyc:   BLIC279010:BL05278-MONOMER
- HAMAP:   MF_00386
- InterPro:   IPR002696
- ProDom:   PD004225
- TIGRFAMs:   TIGR00278

Pfam domain/function: PF01809 DUF37

EC number: NA

Molecular weight: Translated: 9292; Mature: 9292

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRAAIIFIRFYQKAISPLFPPTCRFYPTCSNYGLEAIQRFGFIKGSYLLIKRLLKCHPL
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCC
HPGGFDPVPNQTDQKKEGDSD
CCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRAAIIFIRFYQKAISPLFPPTCRFYPTCSNYGLEAIQRFGFIKGSYLLIKRLLKCHPL
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCC
HPGGFDPVPNQTDQKKEGDSD
CCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA