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The map label for this gene is scpA

Identifier: 52786207

GI number: 52786207

Start: 2403383

End: 2404138

Strand: Reverse

Name: scpA

Synonym: BLi02468

Alternate gene names: 52786207

Gene position: 2404138-2403383 (Counterclockwise)

Preceding gene: 52786210

Following gene: 52786206

Centisome position: 56.93

GC content: 45.11

Gene sequence:

>756_bases
ATGGAATATCAGGTGAAAATCGAGGCGTTTGAAGGGCCCCTGGATCTGCTGCTGCACTTAATCAACCGCCTTGAAATAGA
CATTTATGACATACCTGTTGCGAAGATAACCGAGCAGTATTTATTATATGTGCACACGATGCGCGAACTTGAGCTCGACG
TGGCCAGCGAGTATTTGGTGATGGCTGCGACCCTTCTCAGCATCAAAAGCCGAATGCTTCTTCCAAAGCAGGAAGAAGAG
CTGTTTGACGAAGAGTTTCTCGAGGAGGAAGAGGATCCGAGAGAAGAATTGATTGAAAAATTAATAGAGTACAGAAAATA
CAAAAGTGCCGCGCAAAATTTAAAGGAGCGCGAGGAAGAGCGGCAAAAAGCATTCGCAAAGCCGCCGAGCGATTTAAGCG
ACTACGCCAAGGAAATCAAACTCAGCGAGCAAAAGCTGTCCGTCACCGTTTACGACATGCTCGGGGCGTTTCAAAAAGTG
CTGAACCGCAAAAAAATCAACCGGCCGTCTGAAACAAGAATTTCAAGACAGGAAATACCGATAGAAGAGCGAATGACGCA
AATCGTCGACTGTTTGAAATCGTCCCGCAAAAGGATGCATTTTATGGAACTGTTCCCGTATGAACAGAAAGAGCATCTCG
TTGTGACGTTTTTGGCGATTTTGGAGCTGATGAAAAACCAGCTGATCATCATTGAACAGGAACACAACTTTTCAGATATT
TACATAACAGGGAGTGAAGCGATTCATGACGCTTGA

Upstream 100 bases:

>100_bases
CTTAAATTATATTGGACTTCATGCAGACGCGTAATTTATACTAAAGGGTAGCCAGTTTTAGCCGGCTTAGAAGCGATTTT
GAAAATGGTGAGAAATGAAC

Downstream 100 bases:

>100_bases
TATCGTGAATTGGAAAGCCATTGTCGAAGCGCTTTTGTATGCCGCCGGCGACGAGGGCCTGACAAAAAAACAGCTATTAT
CCGTTTTGGAGGTCGATGAA

Product: segregation and condensation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MEYQVKIEAFEGPLDLLLHLINRLEIDIYDIPVAKITEQYLLYVHTMRELELDVASEYLVMAATLLSIKSRMLLPKQEEE
LFDEEFLEEEEDPREELIEKLIEYRKYKSAAQNLKEREEERQKAFAKPPSDLSDYAKEIKLSEQKLSVTVYDMLGAFQKV
LNRKKINRPSETRISRQEIPIEERMTQIVDCLKSSRKRMHFMELFPYEQKEHLVVTFLAILELMKNQLIIIEQEHNFSDI
YITGSEAIHDA

Sequences:

>Translated_251_residues
MEYQVKIEAFEGPLDLLLHLINRLEIDIYDIPVAKITEQYLLYVHTMRELELDVASEYLVMAATLLSIKSRMLLPKQEEE
LFDEEFLEEEEDPREELIEKLIEYRKYKSAAQNLKEREEERQKAFAKPPSDLSDYAKEIKLSEQKLSVTVYDMLGAFQKV
LNRKKINRPSETRISRQEIPIEERMTQIVDCLKSSRKRMHFMELFPYEQKEHLVVTFLAILELMKNQLIIIEQEHNFSDI
YITGSEAIHDA
>Mature_251_residues
MEYQVKIEAFEGPLDLLLHLINRLEIDIYDIPVAKITEQYLLYVHTMRELELDVASEYLVMAATLLSIKSRMLLPKQEEE
LFDEEFLEEEEDPREELIEKLIEYRKYKSAAQNLKEREEERQKAFAKPPSDLSDYAKEIKLSEQKLSVTVYDMLGAFQKV
LNRKKINRPSETRISRQEIPIEERMTQIVDCLKSSRKRMHFMELFPYEQKEHLVVTFLAILELMKNQLIIIEQEHNFSDI
YITGSEAIHDA

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SCPA_BACLD (Q65HX1)

Other databases:

- EMBL:   CP000002
- EMBL:   AE017333
- RefSeq:   YP_079627.1
- RefSeq:   YP_092036.1
- STRING:   Q65HX1
- EnsemblBacteria:   EBBACT00000057712
- EnsemblBacteria:   EBBACT00000059234
- GeneID:   3029461
- GeneID:   3098785
- GenomeReviews:   AE017333_GR
- GenomeReviews:   CP000002_GR
- KEGG:   bld:BLi02468
- KEGG:   bli:BL01886
- NMPDR:   fig|279010.5.peg.314
- eggNOG:   COG1354
- GeneTree:   EBGT00050000002600
- HOGENOM:   HBG728383
- OMA:   IRKQNID
- ProtClustDB:   PRK00104
- BioCyc:   BLIC279010-1:BLI02468-MONOMER
- BioCyc:   BLIC279010:BL01886-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01805
- InterPro:   IPR003768

Pfam domain/function: PF02616 ScpA_ScpB

EC number: NA

Molecular weight: Translated: 29774; Mature: 29774

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYQVKIEAFEGPLDLLLHLINRLEIDIYDIPVAKITEQYLLYVHTMRELELDVASEYLV
CCEEEEEEECCCHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAATLLSIKSRMLLPKQEEELFDEEFLEEEEDPREELIEKLIEYRKYKSAAQNLKEREEE
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQKAFAKPPSDLSDYAKEIKLSEQKLSVTVYDMLGAFQKVLNRKKINRPSETRISRQEIP
HHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
IEERMTQIVDCLKSSRKRMHFMELFPYEQKEHLVVTFLAILELMKNQLIIIEQEHNFSDI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCEE
YITGSEAIHDA
EEECCHHHCCC
>Mature Secondary Structure
MEYQVKIEAFEGPLDLLLHLINRLEIDIYDIPVAKITEQYLLYVHTMRELELDVASEYLV
CCEEEEEEECCCHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAATLLSIKSRMLLPKQEEELFDEEFLEEEEDPREELIEKLIEYRKYKSAAQNLKEREEE
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQKAFAKPPSDLSDYAKEIKLSEQKLSVTVYDMLGAFQKVLNRKKINRPSETRISRQEIP
HHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
IEERMTQIVDCLKSSRKRMHFMELFPYEQKEHLVVTFLAILELMKNQLIIIEQEHNFSDI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCEE
YITGSEAIHDA
EEECCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA