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The map label for this gene is ypbF [H]

Identifier: 52786180

GI number: 52786180

Start: 2376252

End: 2376704

Strand: Reverse

Name: ypbF [H]

Synonym: BLi02438

Alternate gene names: 52786180

Gene position: 2376704-2376252 (Counterclockwise)

Preceding gene: 52786181

Following gene: 52786179

Centisome position: 56.28

GC content: 45.92

Gene sequence:

>453_bases
GTGAGGACTGTGGGAAGCGAGCTTGAAGAGCTGGACCGTTTTACGGACGAACCGACGAAACAAATGCTCCGCGCCTTAAT
TAAAAGGAAGAAAAAGTACGAAAACTATGCCAGACAGACATTCAGGTGGCAGGCGGTGGCGGCGATATGCGCGGTTTCGT
TTTGTGTGTTTGCAGCGTCAAAGGGGATTGGGCAAAACGGCTTCCTTTCCGGCTTGCTGAATGACTCCGTCTATCTGCTG
TGGATCTTGTCGGCCGCTTTTGCATACAGCACCGCTTACTATTTTAAAAAGAAGGAAGAAAAAGCAGAAGGGGAATATCA
TAAGCTGAGATGCGAGATTATTCAGAAAAGCACGGATCTATGGCCCCAGCCTGAAGAGTGGAAATCAAGGGAAACGGTTT
TTAAGATCATGAAACAGCAGTATGACATTAATCTTTATTTCGAAAGCAAATAA

Upstream 100 bases:

>100_bases
AATGTCTACGCCGGCCAGGTCCTGGATATCCCGATTTATTAACAGTGGCATGATTTTGCCCGCGAATACATATACATTGT
ACTAACAAATAGGACAAGGT

Downstream 100 bases:

>100_bases
AAGACGTTTTCTTGTTAAAAGAAACGTCTTTTTGCATCAAGCCGTCTTATCATAAACAAAACAGATTGGAGAATGCACAT
GATCTATTGGCTCAGTCTGG

Product: YpbF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MRTVGSELEELDRFTDEPTKQMLRALIKRKKKYENYARQTFRWQAVAAICAVSFCVFAASKGIGQNGFLSGLLNDSVYLL
WILSAAFAYSTAYYFKKKEEKAEGEYHKLRCEIIQKSTDLWPQPEEWKSRETVFKIMKQQYDINLYFESK

Sequences:

>Translated_150_residues
MRTVGSELEELDRFTDEPTKQMLRALIKRKKKYENYARQTFRWQAVAAICAVSFCVFAASKGIGQNGFLSGLLNDSVYLL
WILSAAFAYSTAYYFKKKEEKAEGEYHKLRCEIIQKSTDLWPQPEEWKSRETVFKIMKQQYDINLYFESK
>Mature_150_residues
MRTVGSELEELDRFTDEPTKQMLRALIKRKKKYENYARQTFRWQAVAAICAVSFCVFAASKGIGQNGFLSGLLNDSVYLL
WILSAAFAYSTAYYFKKKEEKAEGEYHKLRCEIIQKSTDLWPQPEEWKSRETVFKIMKQQYDINLYFESK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020210
- ProDom:   PD089241 [H]

Pfam domain/function: PF10864 DUF2663 [H]

EC number: NA

Molecular weight: Translated: 17668; Mature: 17668

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTVGSELEELDRFTDEPTKQMLRALIKRKKKYENYARQTFRWQAVAAICAVSFCVFAAS
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGIGQNGFLSGLLNDSVYLLWILSAAFAYSTAYYFKKKEEKAEGEYHKLRCEIIQKSTDL
CCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
WPQPEEWKSRETVFKIMKQQYDINLYFESK
CCCCHHHHHHHHHHHHHHHHCCEEEEEECC
>Mature Secondary Structure
MRTVGSELEELDRFTDEPTKQMLRALIKRKKKYENYARQTFRWQAVAAICAVSFCVFAAS
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGIGQNGFLSGLLNDSVYLLWILSAAFAYSTAYYFKKKEEKAEGEYHKLRCEIIQKSTDL
CCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
WPQPEEWKSRETVFKIMKQQYDINLYFESK
CCCCHHHHHHHHHHHHHHHHCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]