Click here to switch to the map view.

The map label for this gene is ypbH [H]

Identifier: 52786178

GI number: 52786178

Start: 2374650

End: 2375234

Strand: Reverse

Name: ypbH [H]

Synonym: BLi02436

Alternate gene names: 52786178

Gene position: 2375234-2374650 (Counterclockwise)

Preceding gene: 52786179

Following gene: 52786177

Centisome position: 56.25

GC content: 41.37

Gene sequence:

>585_bases
ATGCGGCTTGAGCGTCTAAATTATAATAAGATCAAAATCTTTCTGACACTTGACGATCTGACAGACCGGGGGCTGACGAA
AGAAGACCTTTGGAAAGACTCATTTAAAGTTCAGCAGCTGTTTAAGGACATGATGAACGAAGCGAATACAGAGCTCGGGT
TCGAAGCGAATGGCCCAATCGCTGTTGAAGTGTATTCTCTTCAAGCACAAGGAATGGTCATCATTGTCACAAAAAATCAG
GAAACAGATGAAGACGATAATGAGTATGATGAGGACTATATTGAAATGCAAGTCAAACTTGGCGAAAGTGTTGACATTAT
ATATGAATTTCAAACGTTTGAGCATCTGATTGAACTTTCCAAAAATCTGGACCGCATCGGTATTCAAGGCGGGACAGTCT
ACCACTATGAGGGCAGGTATTTCTTAAGTCTCGACGATTTTGACTCCCTTGAGGTTGACGGCGTGATTTCGATTTTAGCC
GAATATGGGAATCCGACGACTTTAACGATTTACAGGCTTCAGGAATACGGAAAGAAAATCATGGAGAACAATGCCGTTCA
GACCATTCAGACATACTTTAAATAG

Upstream 100 bases:

>100_bases
AAACACAGTGTAAACTGGTATCAAAATTAAGAACCTATGACTCATCATCTCCATATAATAAGATATATGATGTGTGCAAG
AAGAGGCAGGAGGGAACGTT

Downstream 100 bases:

>100_bases
CCCGCATTCAAAAAAGATATTCTGCTGTGTTAAACAGCAGTTTTTTTCTGCCGAAAATAAGAATATAACAAAAATGATTT
TTCTTGAATATTTTCACGAA

Product: adaptor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MRLERLNYNKIKIFLTLDDLTDRGLTKEDLWKDSFKVQQLFKDMMNEANTELGFEANGPIAVEVYSLQAQGMVIIVTKNQ
ETDEDDNEYDEDYIEMQVKLGESVDIIYEFQTFEHLIELSKNLDRIGIQGGTVYHYEGRYFLSLDDFDSLEVDGVISILA
EYGNPTTLTIYRLQEYGKKIMENNAVQTIQTYFK

Sequences:

>Translated_194_residues
MRLERLNYNKIKIFLTLDDLTDRGLTKEDLWKDSFKVQQLFKDMMNEANTELGFEANGPIAVEVYSLQAQGMVIIVTKNQ
ETDEDDNEYDEDYIEMQVKLGESVDIIYEFQTFEHLIELSKNLDRIGIQGGTVYHYEGRYFLSLDDFDSLEVDGVISILA
EYGNPTTLTIYRLQEYGKKIMENNAVQTIQTYFK
>Mature_194_residues
MRLERLNYNKIKIFLTLDDLTDRGLTKEDLWKDSFKVQQLFKDMMNEANTELGFEANGPIAVEVYSLQAQGMVIIVTKNQ
ETDEDDNEYDEDYIEMQVKLGESVDIIYEFQTFEHLIELSKNLDRIGIQGGTVYHYEGRYFLSLDDFDSLEVDGVISILA
EYGNPTTLTIYRLQEYGKKIMENNAVQTIQTYFK

Specific function: Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Also involved in Spx degradation by ClpC. Acts negatively in the development of competence by binding ComK and rec

COG id: COG4862

COG function: function code OTN; Negative regulator of genetic competence, sporulation and motility

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mecA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008681 [H]

Pfam domain/function: PF05389 MecA [H]

EC number: NA

Molecular weight: Translated: 22621; Mature: 22621

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLERLNYNKIKIFLTLDDLTDRGLTKEDLWKDSFKVQQLFKDMMNEANTELGFEANGPI
CCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCE
AVEVYSLQAQGMVIIVTKNQETDEDDNEYDEDYIEMQVKLGESVDIIYEFQTFEHLIELS
EEEEEEEECCCEEEEEECCCCCCCCCCCCCHHHEEEEEECCCCEEEEEEHHHHHHHHHHH
KNLDRIGIQGGTVYHYEGRYFLSLDDFDSLEVDGVISILAEYGNPTTLTIYRLQEYGKKI
CCCCCEECCCCEEEEECCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHH
MENNAVQTIQTYFK
HHCCHHHHHHHHCC
>Mature Secondary Structure
MRLERLNYNKIKIFLTLDDLTDRGLTKEDLWKDSFKVQQLFKDMMNEANTELGFEANGPI
CCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCE
AVEVYSLQAQGMVIIVTKNQETDEDDNEYDEDYIEMQVKLGESVDIIYEFQTFEHLIELS
EEEEEEEECCCEEEEEECCCCCCCCCCCCCHHHEEEEEECCCCEEEEEEHHHHHHHHHHH
KNLDRIGIQGGTVYHYEGRYFLSLDDFDSLEVDGVISILAEYGNPTTLTIYRLQEYGKKI
CCCCCEECCCCEEEEECCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHH
MENNAVQTIQTYFK
HHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]