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The map label for this gene is fni

Identifier: 52786168

GI number: 52786168

Start: 2364297

End: 2365346

Strand: Reverse

Name: fni

Synonym: BLi02426

Alternate gene names: 52786168

Gene position: 2365346-2364297 (Counterclockwise)

Preceding gene: 52786169

Following gene: 52786166

Centisome position: 56.02

GC content: 51.24

Gene sequence:

>1050_bases
GTGACGCGAGCAAAAAGAAAAAAAGAACACATTGATCATGCCCTGTCCACCGGACAGAAACGTCAGACCGGGCTTGATGA
TATCACATTTGTTCACGTCAGCCTTCCGGAAACGGAATTGTCACAAGTTGATACTTCAACCAAAATAGGCGAACTGTTTT
TAAGTTCGCCTATTTTTATCAATGCGATGACAGGCGGAGGCGGGAAGGCGACGTTTGAGATCAACAGGGCTTTGGCGAGG
GCGGCTGCACAAACAGGCATACCGGTCGCTGTCGGCTCGCAAATGTCCGCTTTGAAAGATCCCGATGAGCGACCTTCATA
CGAGATCGTCAGAAAAGAAAATATGAAGGGGCTTGTATTCGCCAATTTGGGGAGCGAAGCGACAGTGGAACAGGCCAAGC
GGGCGGTCGACATGATTGAAGCCGATATGCTTCAAATTCACCTCAATGTGATTCAGGAAATCGTCATGCCTGAAGGCGAC
CGCAATTTTACAGGACGCCTGCGCCGGATTGAAGACATCTGCCGGAGTGTCAGCGTACCAGTCGCCGTAAAAGAGGTTGG
CTTTGGGATGAGCAGGGATACCGCGGCCCGGCTTTTTAACGTCGGCGTTCAGGCGATCGATGTCGGCGGTTTCGGGGGAA
CGAATTTTTCGAAAATCGAAAATTTGCGCAGGGATAAAGCAGTTGAGTTTTTCGATCAATGGGGCATATCGACAGCAGCC
AGCCTGGCCGAAGTCAGTTCGATATCCGGCGATCGGCCGATTATCGCATCCGGCGGCATACAAGATGCCCTTGATTTGGC
CAAATCGATAGCGCTGGGCGCGTCTGCGGCTGGGATGGCAGGCTATTTTCTCAAGGTGCTGACAGCTTCGGGAGAAGAGG
CGTTAGCCGCCGAAATCGAGAGCCTGATAGAAGATTTCAAAAGAATTATGACCGTCTTGGGTTGCAGGACGATTGAACAG
TTGAAAAAAGCGCCGCTCGTCATCAAGGGCGATACATATCATTGGCTGAAAGCGAGGGGTGTTGACCCCTTTGTTTACAG
CATGCGTTAA

Upstream 100 bases:

>100_bases
TTACCGTCAGTACCAGGCGAAGGAAGAGTCTTCAGGGTTCCAGCTCGGTGAAATGATCGGAGACAAACTGAATAAATTAA
AGTAAAATTTGGTGATGATG

Downstream 100 bases:

>100_bases
AAAAACCGGCTTCTCTTGAGCCGGTTTTTTTACGGGTTTCGCTTGCGCGCGTCCTCCGCACTTTCGAGAGAGGCGGCGCC
ATTGTAGCTGATCGACTGGT

Product: isopentenyl pyrophosphate isomerase

Products: NA

Alternate protein names: IPP isomerase; Isopentenyl pyrophosphate isomerase

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MTRAKRKKEHIDHALSTGQKRQTGLDDITFVHVSLPETELSQVDTSTKIGELFLSSPIFINAMTGGGGKATFEINRALAR
AAAQTGIPVAVGSQMSALKDPDERPSYEIVRKENMKGLVFANLGSEATVEQAKRAVDMIEADMLQIHLNVIQEIVMPEGD
RNFTGRLRRIEDICRSVSVPVAVKEVGFGMSRDTAARLFNVGVQAIDVGGFGGTNFSKIENLRRDKAVEFFDQWGISTAA
SLAEVSSISGDRPIIASGGIQDALDLAKSIALGASAAGMAGYFLKVLTASGEEALAAEIESLIEDFKRIMTVLGCRTIEQ
LKKAPLVIKGDTYHWLKARGVDPFVYSMR

Sequences:

>Translated_349_residues
MTRAKRKKEHIDHALSTGQKRQTGLDDITFVHVSLPETELSQVDTSTKIGELFLSSPIFINAMTGGGGKATFEINRALAR
AAAQTGIPVAVGSQMSALKDPDERPSYEIVRKENMKGLVFANLGSEATVEQAKRAVDMIEADMLQIHLNVIQEIVMPEGD
RNFTGRLRRIEDICRSVSVPVAVKEVGFGMSRDTAARLFNVGVQAIDVGGFGGTNFSKIENLRRDKAVEFFDQWGISTAA
SLAEVSSISGDRPIIASGGIQDALDLAKSIALGASAAGMAGYFLKVLTASGEEALAAEIESLIEDFKRIMTVLGCRTIEQ
LKKAPLVIKGDTYHWLKARGVDPFVYSMR
>Mature_348_residues
TRAKRKKEHIDHALSTGQKRQTGLDDITFVHVSLPETELSQVDTSTKIGELFLSSPIFINAMTGGGGKATFEINRALARA
AAQTGIPVAVGSQMSALKDPDERPSYEIVRKENMKGLVFANLGSEATVEQAKRAVDMIEADMLQIHLNVIQEIVMPEGDR
NFTGRLRRIEDICRSVSVPVAVKEVGFGMSRDTAARLFNVGVQAIDVGGFGGTNFSKIENLRRDKAVEFFDQWGISTAAS
LAEVSSISGDRPIIASGGIQDALDLAKSIALGASAAGMAGYFLKVLTASGEEALAAEIESLIEDFKRIMTVLGCRTIEQL
KKAPLVIKGDTYHWLKARGVDPFVYSMR

Specific function: Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)

COG id: COG1304

COG function: function code C; L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IPP isomerase type 2 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): IDI2_BACLD (Q65I10)

Other databases:

- EMBL:   AE017333
- EMBL:   CP000002
- RefSeq:   YP_079589.2
- RefSeq:   YP_091997.1
- ProteinModelPortal:   Q65I10
- SMR:   Q65I10
- STRING:   Q65I10
- EnsemblBacteria:   EBBACT00000058204
- EnsemblBacteria:   EBBACT00000060603
- GeneID:   3028516
- GeneID:   3098052
- GenomeReviews:   AE017333_GR
- GenomeReviews:   CP000002_GR
- KEGG:   bld:BLi02426
- KEGG:   bli:BL02217
- NMPDR:   fig|279010.5.peg.275
- eggNOG:   COG1304
- GeneTree:   EBGT00050000001841
- HOGENOM:   HBG354479
- ProtClustDB:   PRK05437
- BioCyc:   BLIC279010-1:BLI02426-MONOMER
- BioCyc:   BLIC279010:BL02217-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00354
- InterPro:   IPR013785
- InterPro:   IPR000262
- InterPro:   IPR011179
- Gene3D:   G3DSA:3.20.20.70
- PANTHER:   PTHR10578:SF3
- PIRSF:   PIRSF003314
- TIGRFAMs:   TIGR02151

Pfam domain/function: PF01070 FMN_dh

EC number: =5.3.3.2

Molecular weight: Translated: 37778; Mature: 37647

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRAKRKKEHIDHALSTGQKRQTGLDDITFVHVSLPETELSQVDTSTKIGELFLSSPIFI
CCCHHHHHHHHHHHHHCCCHHHCCCCCEEEEEEECCHHHHHHHCCHHHHHHHHHCCCEEE
NAMTGGGGKATFEINRALARAAAQTGIPVAVGSQMSALKDPDERPSYEIVRKENMKGLVF
EEEECCCCEEEEHHHHHHHHHHHHCCCCEEECCCHHHHCCCCCCCCHHHHHHCCCCEEEE
ANLGSEATVEQAKRAVDMIEADMLQIHLNVIQEIVMPEGDRNFTGRLRRIEDICRSVSVP
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
VAVKEVGFGMSRDTAARLFNVGVQAIDVGGFGGTNFSKIENLRRDKAVEFFDQWGISTAA
EEHHHHCCCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
SLAEVSSISGDRPIIASGGIQDALDLAKSIALGASAAGMAGYFLKVLTASGEEALAAEIE
HHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHH
SLIEDFKRIMTVLGCRTIEQLKKAPLVIKGDTYHWLKARGVDPFVYSMR
HHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEHHHCCCCCEEECCC
>Mature Secondary Structure 
TRAKRKKEHIDHALSTGQKRQTGLDDITFVHVSLPETELSQVDTSTKIGELFLSSPIFI
CCHHHHHHHHHHHHHCCCHHHCCCCCEEEEEEECCHHHHHHHCCHHHHHHHHHCCCEEE
NAMTGGGGKATFEINRALARAAAQTGIPVAVGSQMSALKDPDERPSYEIVRKENMKGLVF
EEEECCCCEEEEHHHHHHHHHHHHCCCCEEECCCHHHHCCCCCCCCHHHHHHCCCCEEEE
ANLGSEATVEQAKRAVDMIEADMLQIHLNVIQEIVMPEGDRNFTGRLRRIEDICRSVSVP
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
VAVKEVGFGMSRDTAARLFNVGVQAIDVGGFGGTNFSKIENLRRDKAVEFFDQWGISTAA
EEHHHHCCCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
SLAEVSSISGDRPIIASGGIQDALDLAKSIALGASAAGMAGYFLKVLTASGEEALAAEIE
HHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHH
SLIEDFKRIMTVLGCRTIEQLKKAPLVIKGDTYHWLKARGVDPFVYSMR
HHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEHHHCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA