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The map label for this gene is yphA [H]

Identifier: 52786166

GI number: 52786166

Start: 2363461

End: 2364063

Strand: Reverse

Name: yphA [H]

Synonym: BLi02424

Alternate gene names: 52786166

Gene position: 2364063-2363461 (Counterclockwise)

Preceding gene: 52786168

Following gene: 52786165

Centisome position: 55.99

GC content: 42.95

Gene sequence:

>603_bases
ATGGAAGAATTCTATTATTATTGGTCAATGTGGTTTTTATGGGTGCTGACGACTTTTATCCTCGAGAAAAACAGGTTTCG
CTTTTATGCGTCAGCATTTATTTTGCTCAACATCATTTTAAGTATGTATCAGGTCAGGCTCTTTATGTATTTTAATGCCG
CCTATTTGTCGTTTTATATCGGAGCCTTCATGCTGTGCGGTTTTTTGAGGCTTCATAAAAGTGTCAAGCGGCTGCTGCTT
CATCTCTCGATGGTGTCCGCCTACGGTTTTTTGTTTCTGTTTGCATTATATGACCCTGTTTGGTTTATCCTAAAGCCTGA
ATGGCTGATCATCATCTTGTTTGTCATCATGACAGCAGCTTTTGAAAGAAGCTTCGCCGTCCGTCTCGGGGTGTTTGTGC
TCGGGATGTGCCAGGGGGAGCTCTTGTATACATTCGTCATCAGAAAGCTCTATGGAGACATTGCAGCGGGCGGTTATTCA
TGGCTGTCAATGTGCGCTGCGGGGATCGTTCTCGTTTACGGAATATCCCAGTATGAACAGCTGATGCATCAAGTCTATCA
TAAATTGAAGCGATTGAATAAAGGAGCAGCAAAAATGTCATGA

Upstream 100 bases:

>100_bases
GCTTCTTTTCCTGTCTGTCTTTTCCCAACGCTGTTCCCTCCTTATCGCACGTTTAAAAAATCTTAAGTCGCTCCATACTG
AAAATGGAGGACGAAAACAT

Downstream 100 bases:

>100_bases
GCCAATATACTTATCCGATCATCTTGGGAATTGTCGCAGGTATTGTTGTCAGAGTATATATGCTCCGAACCGACTACCGC
CAGTACCCCACTTATCTTCA

Product: YphA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MEEFYYYWSMWFLWVLTTFILEKNRFRFYASAFILLNIILSMYQVRLFMYFNAAYLSFYIGAFMLCGFLRLHKSVKRLLL
HLSMVSAYGFLFLFALYDPVWFILKPEWLIIILFVIMTAAFERSFAVRLGVFVLGMCQGELLYTFVIRKLYGDIAAGGYS
WLSMCAAGIVLVYGISQYEQLMHQVYHKLKRLNKGAAKMS

Sequences:

>Translated_200_residues
MEEFYYYWSMWFLWVLTTFILEKNRFRFYASAFILLNIILSMYQVRLFMYFNAAYLSFYIGAFMLCGFLRLHKSVKRLLL
HLSMVSAYGFLFLFALYDPVWFILKPEWLIIILFVIMTAAFERSFAVRLGVFVLGMCQGELLYTFVIRKLYGDIAAGGYS
WLSMCAAGIVLVYGISQYEQLMHQVYHKLKRLNKGAAKMS
>Mature_200_residues
MEEFYYYWSMWFLWVLTTFILEKNRFRFYASAFILLNIILSMYQVRLFMYFNAAYLSFYIGAFMLCGFLRLHKSVKRLLL
HLSMVSAYGFLFLFALYDPVWFILKPEWLIIILFVIMTAAFERSFAVRLGVFVLGMCQGELLYTFVIRKLYGDIAAGGYS
WLSMCAAGIVLVYGISQYEQLMHQVYHKLKRLNKGAAKMS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014617 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23628; Mature: 23628

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEFYYYWSMWFLWVLTTFILEKNRFRFYASAFILLNIILSMYQVRLFMYFNAAYLSFYI
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAFMLCGFLRLHKSVKRLLLHLSMVSAYGFLFLFALYDPVWFILKPEWLIIILFVIMTAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
FERSFAVRLGVFVLGMCQGELLYTFVIRKLYGDIAAGGYSWLSMCAAGIVLVYGISQYEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LMHQVYHKLKRLNKGAAKMS
HHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MEEFYYYWSMWFLWVLTTFILEKNRFRFYASAFILLNIILSMYQVRLFMYFNAAYLSFYI
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAFMLCGFLRLHKSVKRLLLHLSMVSAYGFLFLFALYDPVWFILKPEWLIIILFVIMTAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
FERSFAVRLGVFVLGMCQGELLYTFVIRKLYGDIAAGGYSWLSMCAAGIVLVYGISQYEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LMHQVYHKLKRLNKGAAKMS
HHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]