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The map label for this gene is ykoS [H]

Identifier: 52785910

GI number: 52785910

Start: 2108770

End: 2110485

Strand: Reverse

Name: ykoS [H]

Synonym: BLi02160

Alternate gene names: 52785910

Gene position: 2110485-2108770 (Counterclockwise)

Preceding gene: 52785911

Following gene: 52785909

Centisome position: 49.98

GC content: 46.56

Gene sequence:

>1716_bases
ATGGATGTGGTATTCGTGTCGTTATTCGTCAAAAAGTTGAGCAGAGAAAAGCGATATTTGATTTTCGCATTCAGTGTCAT
TCTTCTCTATGTCCTTCCGCTTTACATATTAAATGAAGACGCTCATATCCGTGTGCATGACAACCTGGATTCCAATATCG
CCTGGTATAAGGTGCTGGCCGAAAGCGGGCAGCTGCTCGGCGGCGTTAAAGCCGTCATTCCGCAAATCATCAACGGGTTG
CCGCGGGACGCTTACGGAACGGAATGGAGCGGCATTGTCTGGCTTCACGCCTTGTTTCCTTCGATGACCGCATATGCTTT
AAGCCAGACGATCACGAGGGTGTTTGCCTTTGTCGGGATGTACCTGCTGCTGAAAAGCCATGTGATTCGCGATGAAAAGG
CGTATTTCATCAGAATCGCCGTATCGCTGGCATTTGCCCTGACACCCTTTTGGCCTTCAGGAATGCTTAGTACGCTTGGT
CACCCTTTGGCCTTATGGGCTTTTTTAAACATCAGGGCAGGGAACGACTCATGGAAAGAGTGGTCAACCCTTGCGCTTTT
ACCGCTTTACTCAAGCTTTGTGCTCGGTTTCTTCTTTTTCCTTGCCGCCGTTTCGCTGATTTGGCTTTATGATTTGGTCA
CAAAGCGCAGCTTTAACCTTCGCTTTCTCGGAAGTATCGCTCTTATGACAGGCATATTCCTGGCGATAGAATACCGGCTT
GTTTATTCGGTTTTCGCTTCAGGCGAAACGATGCATCGCGTTGAATTTATTTCGTCCAGGCATGACATCCTTCATTCGTT
TCGGTTGTCCTTTAAAAATTTCGTGCTCGGCCACAATCATGTCATGACCGTCCATACGGCAGTGATACTGCCTTTGATTG
TGCTCACTTTCGGGCTCGTCGTTGCTAGACAACGCAAAAAGCGGCCAAGCGAAGAAAAGCTGTTCATCTTTTTATTCATT
TTAAATTATGCGCTTTCTTTATGGTATGCCCTCTGGTTCAACAAGCTGTGGGCGCTTCCAAAGGAAAAGATCAGTCTGCT
TTCGGCATTCAATTTCGCCCGTTTCCACTTTTTGCGCCCTCTTGTGATATACGCAAGCTTTGCCGTTGCATGCTACATAT
TGTGGAAAATGGGGAAGAGATGGCGGCGTTTTGTTCATGCCGCACTAATCGCCCAGCTGCTTGTGCTTATTCCGTTTCAT
GAAGAGCTGACTTACGGCGCATACCACCACGCCCCAAGCTTTCGGGAATTTTATGCATCAGATCAGTTTAAACAGATCAA
ACGATTCATCGGCCGTCCTACCGATTCCTACCGGGTGGCGAGCATCGGCCTGCATCCGGCGATTGCGCAGTATAACGGCT
TCTACACACTTGATACGTATGCCAATATTTATCCACTGAAATACAAGTATCAATTCCGGAAAATCATCGCCAAAGAGCTT
GATAAAAATCCGGCCCTGAAGCGCTATTTCGATGAGTGGGGGAGCCGCTGCTACTTGTTTGTTGACGAGCTTGGAAAACA
TTACGCGTTCAAAAAGAGCACAAAGAAAAAAATCACGAACCTGGAGTTAAACACTGAAGCATTCAAAAAAATGGGGGGAC
AATATATTTTTTCTTCAGTTCCGATTATGAATGCAGAACAAAACAAGCTTGCGTTTTTAAAGCGGTTCAGCCACCCGCAG
TCCGCTTGGAACATCTATGTATATGAAGCGAAATAA

Upstream 100 bases:

>100_bases
AGCAGGCAGCTTTTTTCATTTTGATGAATTTTTCAAAACGCTTCCACGAATAATAACAGCGATATGATAAAAGCTCTCTA
TATTTCCAAAAGAGAACAAA

Downstream 100 bases:

>100_bases
GCATCGATAAGGAGGAAGCAAATTGAATCTTCAACAGCCTTTGCTGACGATCGTCGTACCCTGTTATAACGAAGAGGACG
TGTTTGCCGAAACCGCAAAA

Product: YkoS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 571; Mature: 571

Protein sequence:

>571_residues
MDVVFVSLFVKKLSREKRYLIFAFSVILLYVLPLYILNEDAHIRVHDNLDSNIAWYKVLAESGQLLGGVKAVIPQIINGL
PRDAYGTEWSGIVWLHALFPSMTAYALSQTITRVFAFVGMYLLLKSHVIRDEKAYFIRIAVSLAFALTPFWPSGMLSTLG
HPLALWAFLNIRAGNDSWKEWSTLALLPLYSSFVLGFFFFLAAVSLIWLYDLVTKRSFNLRFLGSIALMTGIFLAIEYRL
VYSVFASGETMHRVEFISSRHDILHSFRLSFKNFVLGHNHVMTVHTAVILPLIVLTFGLVVARQRKKRPSEEKLFIFLFI
LNYALSLWYALWFNKLWALPKEKISLLSAFNFARFHFLRPLVIYASFAVACYILWKMGKRWRRFVHAALIAQLLVLIPFH
EELTYGAYHHAPSFREFYASDQFKQIKRFIGRPTDSYRVASIGLHPAIAQYNGFYTLDTYANIYPLKYKYQFRKIIAKEL
DKNPALKRYFDEWGSRCYLFVDELGKHYAFKKSTKKKITNLELNTEAFKKMGGQYIFSSVPIMNAEQNKLAFLKRFSHPQ
SAWNIYVYEAK

Sequences:

>Translated_571_residues
MDVVFVSLFVKKLSREKRYLIFAFSVILLYVLPLYILNEDAHIRVHDNLDSNIAWYKVLAESGQLLGGVKAVIPQIINGL
PRDAYGTEWSGIVWLHALFPSMTAYALSQTITRVFAFVGMYLLLKSHVIRDEKAYFIRIAVSLAFALTPFWPSGMLSTLG
HPLALWAFLNIRAGNDSWKEWSTLALLPLYSSFVLGFFFFLAAVSLIWLYDLVTKRSFNLRFLGSIALMTGIFLAIEYRL
VYSVFASGETMHRVEFISSRHDILHSFRLSFKNFVLGHNHVMTVHTAVILPLIVLTFGLVVARQRKKRPSEEKLFIFLFI
LNYALSLWYALWFNKLWALPKEKISLLSAFNFARFHFLRPLVIYASFAVACYILWKMGKRWRRFVHAALIAQLLVLIPFH
EELTYGAYHHAPSFREFYASDQFKQIKRFIGRPTDSYRVASIGLHPAIAQYNGFYTLDTYANIYPLKYKYQFRKIIAKEL
DKNPALKRYFDEWGSRCYLFVDELGKHYAFKKSTKKKITNLELNTEAFKKMGGQYIFSSVPIMNAEQNKLAFLKRFSHPQ
SAWNIYVYEAK
>Mature_571_residues
MDVVFVSLFVKKLSREKRYLIFAFSVILLYVLPLYILNEDAHIRVHDNLDSNIAWYKVLAESGQLLGGVKAVIPQIINGL
PRDAYGTEWSGIVWLHALFPSMTAYALSQTITRVFAFVGMYLLLKSHVIRDEKAYFIRIAVSLAFALTPFWPSGMLSTLG
HPLALWAFLNIRAGNDSWKEWSTLALLPLYSSFVLGFFFFLAAVSLIWLYDLVTKRSFNLRFLGSIALMTGIFLAIEYRL
VYSVFASGETMHRVEFISSRHDILHSFRLSFKNFVLGHNHVMTVHTAVILPLIVLTFGLVVARQRKKRPSEEKLFIFLFI
LNYALSLWYALWFNKLWALPKEKISLLSAFNFARFHFLRPLVIYASFAVACYILWKMGKRWRRFVHAALIAQLLVLIPFH
EELTYGAYHHAPSFREFYASDQFKQIKRFIGRPTDSYRVASIGLHPAIAQYNGFYTLDTYANIYPLKYKYQFRKIIAKEL
DKNPALKRYFDEWGSRCYLFVDELGKHYAFKKSTKKKITNLELNTEAFKKMGGQYIFSSVPIMNAEQNKLAFLKRFSHPQ
SAWNIYVYEAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66378; Mature: 66378

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVVFVSLFVKKLSREKRYLIFAFSVILLYVLPLYILNEDAHIRVHDNLDSNIAWYKVLA
CCEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHH
ESGQLLGGVKAVIPQIINGLPRDAYGTEWSGIVWLHALFPSMTAYALSQTITRVFAFVGM
HCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLLLKSHVIRDEKAYFIRIAVSLAFALTPFWPSGMLSTLGHPLALWAFLNIRAGNDSWKE
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHEEHHHHEEECCCCCCHH
WSTLALLPLYSSFVLGFFFFLAAVSLIWLYDLVTKRSFNLRFLGSIALMTGIFLAIEYRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
VYSVFASGETMHRVEFISSRHDILHSFRLSFKNFVLGHNHVMTVHTAVILPLIVLTFGLV
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
VARQRKKRPSEEKLFIFLFILNYALSLWYALWFNKLWALPKEKISLLSAFNFARFHFLRP
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LVIYASFAVACYILWKMGKRWRRFVHAALIAQLLVLIPFHEELTYGAYHHAPSFREFYAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHCCCCHHHHHCC
DQFKQIKRFIGRPTDSYRVASIGLHPAIAQYNGFYTLDTYANIYPLKYKYQFRKIIAKEL
HHHHHHHHHHCCCCCCCEEEEECCCHHHHHCCCEEEECCCCCEEEEEHHHHHHHHHHHHH
DKNPALKRYFDEWGSRCYLFVDELGKHYAFKKSTKKKITNLELNTEAFKKMGGQYIFSSV
CCCCHHHHHHHHHCCEEEEEHHHHCCHHHHHHHHHHHHHCCEECHHHHHHCCCCEEHHCC
PIMNAEQNKLAFLKRFSHPQSAWNIYVYEAK
CCCCCCCHHHHHHHHHCCCCCCEEEEEEECC
>Mature Secondary Structure
MDVVFVSLFVKKLSREKRYLIFAFSVILLYVLPLYILNEDAHIRVHDNLDSNIAWYKVLA
CCEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHH
ESGQLLGGVKAVIPQIINGLPRDAYGTEWSGIVWLHALFPSMTAYALSQTITRVFAFVGM
HCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLLLKSHVIRDEKAYFIRIAVSLAFALTPFWPSGMLSTLGHPLALWAFLNIRAGNDSWKE
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHEEHHHHEEECCCCCCHH
WSTLALLPLYSSFVLGFFFFLAAVSLIWLYDLVTKRSFNLRFLGSIALMTGIFLAIEYRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
VYSVFASGETMHRVEFISSRHDILHSFRLSFKNFVLGHNHVMTVHTAVILPLIVLTFGLV
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
VARQRKKRPSEEKLFIFLFILNYALSLWYALWFNKLWALPKEKISLLSAFNFARFHFLRP
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LVIYASFAVACYILWKMGKRWRRFVHAALIAQLLVLIPFHEELTYGAYHHAPSFREFYAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHCCCCHHHHHCC
DQFKQIKRFIGRPTDSYRVASIGLHPAIAQYNGFYTLDTYANIYPLKYKYQFRKIIAKEL
HHHHHHHHHHCCCCCCCEEEEECCCHHHHHCCCEEEECCCCCEEEEEHHHHHHHHHHHHH
DKNPALKRYFDEWGSRCYLFVDELGKHYAFKKSTKKKITNLELNTEAFKKMGGQYIFSSV
CCCCHHHHHHHHHCCEEEEEHHHHCCHHHHHHHHHHHHHCCEECHHHHHHCCCCEEHHCC
PIMNAEQNKLAFLKRFSHPQSAWNIYVYEAK
CCCCCCCHHHHHHHHHCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]