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The map label for this gene is yngJ [H]

Identifier: 52785896

GI number: 52785896

Start: 2094131

End: 2095291

Strand: Reverse

Name: yngJ [H]

Synonym: BLi02145

Alternate gene names: 52785896

Gene position: 2095291-2094131 (Counterclockwise)

Preceding gene: 52785898

Following gene: 52785895

Centisome position: 49.62

GC content: 51.08

Gene sequence:

>1161_bases
ATGAATTTTGAACTAACCAGAGAACAGCAAATGATTCGTGAACTCGCAAGAGATTTTGCGAAACAGGAAATTGCACCGCA
CGCCGAACATGTTGACAGGACGGGAGAATTTCCGATTGAGACATTTAAAAAAATGGGGGAGCTCGGCCTCTTGGGGATTC
CGTTTCCTGAAAGCTACGGCGGTTCAGGCGGAGATACGATTTCCTATGCACTTAGCGTCGAAGAAATCGGCAAAGCGTGC
GGAAGCACCGGTCTTAGCTATGCTGCGGCTGTATCGCTCGGGGCTGCGCCGATTTATTATTTCGGCACTGAAGAACAAAA
ACAAGAATATCTCGTCCCGCTTGCGACGGGCCGGGCGCTCGGAGCATTTGGGCTGACCGAACCGAATGCAGGTTCCGATG
CGGGCGGCACCCGGACAAAAGCCCGCTCGGAAGGGGACAGCTATGTGATCAGCGGTGAGAAATGCTGGATCACAAATGCA
GGATTTGCCAGGACCGTCATCGTCACCGCCGTCACCGGAATAGATGACAACGGAAAAAACATCATTTCCGCCATCATCGT
TCCGACAGATTCGGAGGGCTTCACCATTAAAAGCGAATATGACAAAATGGGTGTCCGCGGCTCCAATACATCACAGCTCA
TATTGGACAATGTCCGCGTACCAAAACAAAATCTATTGGGAAGCCCGGAAAAAGGGTTTAAACAATTTCTCAATACACTT
GACGGCGGCAGAATTTCGATCGCAGCGCTGGCTGTCGGTATTGCCCAAGGCGCATTTGAGGCGGCGCTCACATACGCGCG
CGAACGAAAACAATTCGGCCGACCGATCTCTTATTTCCAGGCGATTCAGTTCAAGCTTGCCGACATGGCCATGGAAATTG
AGCTCGCCCGCAATATGGTGCTGAAGGCCGCCTGGCTGAAAGATCAAGGACGTCCGTTTACAAAAGAAGCGGCTTTTGCC
AAGCTTTATGCCTCAGAAATGGCGTTCAGGACATGCAATCAGTCCATTCAAATACACGGAGGATACGGGTATATGAAAGA
GTATGGAGTGGAGCGCATGCTGCGGGACGCAAAATTAATGGAAATCGGTGAAGGCACTTCAGAAATTCAACGGCTCGTCA
TCGCAAGGCAGCTCGGCATCGGCAAACAAGCGCTGAAATGA

Upstream 100 bases:

>100_bases
CTGTCCAAAATCCTCTGGCATGAAAAATGCACTTTTTTAATATAATGTTACAAAGCTCTGCTGCCTAAGGAATTTGACGA
TCCAAAAAGGGGGGCACTTT

Downstream 100 bases:

>100_bases
AAACGCTTTCTATCGGAAGGGAGGGACAACGTTGGCAGAGCTGCTCCATTTGACAATTGGAAAGTTATTGGAGAAAACCG
CGGCAGACGCCCCTGATCAC

Product: YngJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MNFELTREQQMIRELARDFAKQEIAPHAEHVDRTGEFPIETFKKMGELGLLGIPFPESYGGSGGDTISYALSVEEIGKAC
GSTGLSYAAAVSLGAAPIYYFGTEEQKQEYLVPLATGRALGAFGLTEPNAGSDAGGTRTKARSEGDSYVISGEKCWITNA
GFARTVIVTAVTGIDDNGKNIISAIIVPTDSEGFTIKSEYDKMGVRGSNTSQLILDNVRVPKQNLLGSPEKGFKQFLNTL
DGGRISIAALAVGIAQGAFEAALTYARERKQFGRPISYFQAIQFKLADMAMEIELARNMVLKAAWLKDQGRPFTKEAAFA
KLYASEMAFRTCNQSIQIHGGYGYMKEYGVERMLRDAKLMEIGEGTSEIQRLVIARQLGIGKQALK

Sequences:

>Translated_386_residues
MNFELTREQQMIRELARDFAKQEIAPHAEHVDRTGEFPIETFKKMGELGLLGIPFPESYGGSGGDTISYALSVEEIGKAC
GSTGLSYAAAVSLGAAPIYYFGTEEQKQEYLVPLATGRALGAFGLTEPNAGSDAGGTRTKARSEGDSYVISGEKCWITNA
GFARTVIVTAVTGIDDNGKNIISAIIVPTDSEGFTIKSEYDKMGVRGSNTSQLILDNVRVPKQNLLGSPEKGFKQFLNTL
DGGRISIAALAVGIAQGAFEAALTYARERKQFGRPISYFQAIQFKLADMAMEIELARNMVLKAAWLKDQGRPFTKEAAFA
KLYASEMAFRTCNQSIQIHGGYGYMKEYGVERMLRDAKLMEIGEGTSEIQRLVIARQLGIGKQALK
>Mature_386_residues
MNFELTREQQMIRELARDFAKQEIAPHAEHVDRTGEFPIETFKKMGELGLLGIPFPESYGGSGGDTISYALSVEEIGKAC
GSTGLSYAAAVSLGAAPIYYFGTEEQKQEYLVPLATGRALGAFGLTEPNAGSDAGGTRTKARSEGDSYVISGEKCWITNA
GFARTVIVTAVTGIDDNGKNIISAIIVPTDSEGFTIKSEYDKMGVRGSNTSQLILDNVRVPKQNLLGSPEKGFKQFLNTL
DGGRISIAALAVGIAQGAFEAALTYARERKQFGRPISYFQAIQFKLADMAMEIELARNMVLKAAWLKDQGRPFTKEAAFA
KLYASEMAFRTCNQSIQIHGGYGYMKEYGVERMLRDAKLMEIGEGTSEIQRLVIARQLGIGKQALK

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=377, Percent_Identity=49.3368700265252, Blast_Score=358, Evalue=6e-99,
Organism=Homo sapiens, GI187960098, Length=380, Percent_Identity=41.0526315789474, Blast_Score=275, Evalue=6e-74,
Organism=Homo sapiens, GI4557231, Length=380, Percent_Identity=41.0526315789474, Blast_Score=275, Evalue=7e-74,
Organism=Homo sapiens, GI226958412, Length=375, Percent_Identity=38.9333333333333, Blast_Score=266, Evalue=3e-71,
Organism=Homo sapiens, GI4501859, Length=375, Percent_Identity=38.6666666666667, Blast_Score=253, Evalue=3e-67,
Organism=Homo sapiens, GI226958414, Length=338, Percent_Identity=39.6449704142012, Blast_Score=243, Evalue=2e-64,
Organism=Homo sapiens, GI7656849, Length=375, Percent_Identity=35.2, Blast_Score=241, Evalue=1e-63,
Organism=Homo sapiens, GI21361497, Length=355, Percent_Identity=39.7183098591549, Blast_Score=238, Evalue=9e-63,
Organism=Homo sapiens, GI4501857, Length=380, Percent_Identity=32.6315789473684, Blast_Score=226, Evalue=4e-59,
Organism=Homo sapiens, GI4557235, Length=344, Percent_Identity=39.8255813953488, Blast_Score=225, Evalue=4e-59,
Organism=Homo sapiens, GI76496475, Length=344, Percent_Identity=39.8255813953488, Blast_Score=225, Evalue=4e-59,
Organism=Homo sapiens, GI4503943, Length=377, Percent_Identity=32.8912466843501, Blast_Score=186, Evalue=4e-47,
Organism=Homo sapiens, GI7669494, Length=351, Percent_Identity=33.6182336182336, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI48976061, Length=378, Percent_Identity=28.5714285714286, Blast_Score=133, Evalue=2e-31,
Organism=Homo sapiens, GI211971008, Length=378, Percent_Identity=28.5714285714286, Blast_Score=133, Evalue=2e-31,
Organism=Homo sapiens, GI38505218, Length=398, Percent_Identity=27.6381909547739, Blast_Score=126, Evalue=4e-29,
Organism=Homo sapiens, GI218563752, Length=237, Percent_Identity=27.8481012658228, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI87081958, Length=384, Percent_Identity=34.6354166666667, Blast_Score=186, Evalue=2e-48,
Organism=Escherichia coli, GI1786223, Length=380, Percent_Identity=28.1578947368421, Blast_Score=169, Evalue=2e-43,
Organism=Escherichia coli, GI87082384, Length=330, Percent_Identity=26.3636363636364, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI87081702, Length=277, Percent_Identity=26.3537906137184, Blast_Score=68, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17534899, Length=383, Percent_Identity=42.0365535248042, Blast_Score=280, Evalue=8e-76,
Organism=Caenorhabditis elegans, GI17569725, Length=382, Percent_Identity=40.0523560209424, Blast_Score=272, Evalue=3e-73,
Organism=Caenorhabditis elegans, GI17570075, Length=382, Percent_Identity=39.5287958115183, Blast_Score=265, Evalue=3e-71,
Organism=Caenorhabditis elegans, GI17538396, Length=378, Percent_Identity=38.3597883597884, Blast_Score=264, Evalue=6e-71,
Organism=Caenorhabditis elegans, GI17508101, Length=380, Percent_Identity=39.2105263157895, Blast_Score=258, Evalue=3e-69,
Organism=Caenorhabditis elegans, GI17506239, Length=373, Percent_Identity=39.142091152815, Blast_Score=253, Evalue=1e-67,
Organism=Caenorhabditis elegans, GI17533517, Length=375, Percent_Identity=34.9333333333333, Blast_Score=229, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI71985184, Length=350, Percent_Identity=38, Blast_Score=229, Evalue=2e-60,
Organism=Caenorhabditis elegans, GI71990804, Length=295, Percent_Identity=42.0338983050847, Blast_Score=212, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI17534353, Length=377, Percent_Identity=32.0954907161804, Blast_Score=211, Evalue=5e-55,
Organism=Caenorhabditis elegans, GI17551932, Length=361, Percent_Identity=31.5789473684211, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI17505929, Length=358, Percent_Identity=30.7262569832402, Blast_Score=192, Evalue=4e-49,
Organism=Caenorhabditis elegans, GI71985192, Length=297, Percent_Identity=36.026936026936, Blast_Score=171, Evalue=6e-43,
Organism=Caenorhabditis elegans, GI32563615, Length=232, Percent_Identity=39.2241379310345, Blast_Score=165, Evalue=5e-41,
Organism=Caenorhabditis elegans, GI71982178, Length=270, Percent_Identity=34.4444444444444, Blast_Score=158, Evalue=5e-39,
Organism=Caenorhabditis elegans, GI17531909, Length=239, Percent_Identity=34.7280334728033, Blast_Score=128, Evalue=6e-30,
Organism=Caenorhabditis elegans, GI17562446, Length=330, Percent_Identity=28.4848484848485, Blast_Score=112, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI17531913, Length=205, Percent_Identity=34.1463414634146, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI86563383, Length=274, Percent_Identity=27.3722627737226, Blast_Score=71, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI86563381, Length=274, Percent_Identity=27.3722627737226, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI21356377, Length=371, Percent_Identity=47.7088948787062, Blast_Score=352, Evalue=3e-97,
Organism=Drosophila melanogaster, GI24646207, Length=383, Percent_Identity=44.9086161879896, Blast_Score=312, Evalue=3e-85,
Organism=Drosophila melanogaster, GI24660351, Length=380, Percent_Identity=42.8947368421053, Blast_Score=290, Evalue=1e-78,
Organism=Drosophila melanogaster, GI21355753, Length=383, Percent_Identity=40.2088772845953, Blast_Score=270, Evalue=1e-72,
Organism=Drosophila melanogaster, GI24666513, Length=372, Percent_Identity=40.0537634408602, Blast_Score=254, Evalue=7e-68,
Organism=Drosophila melanogaster, GI281363737, Length=351, Percent_Identity=36.4672364672365, Blast_Score=211, Evalue=6e-55,
Organism=Drosophila melanogaster, GI19920834, Length=382, Percent_Identity=32.9842931937173, Blast_Score=189, Evalue=3e-48,
Organism=Drosophila melanogaster, GI45550141, Length=325, Percent_Identity=25.8461538461538, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI221473076, Length=325, Percent_Identity=25.8461538461538, Blast_Score=75, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 41969; Mature: 41969

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS00072 ACYL_COA_DH_1 ; PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFELTREQQMIRELARDFAKQEIAPHAEHVDRTGEFPIETFKKMGELGLLGIPFPESYG
CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCC
GSGGDTISYALSVEEIGKACGSTGLSYAAAVSLGAAPIYYFGTEEQKQEYLVPLATGRAL
CCCCCCEEEEEEHHHHHHHHCCCCCHHHHHHHHCCCEEEEECCCCCCHHEEEEEECCCCC
GAFGLTEPNAGSDAGGTRTKARSEGDSYVISGEKCWITNAGFARTVIVTAVTGIDDNGKN
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEECCCCHHEEEEEEEECCCCCCCE
IISAIIVPTDSEGFTIKSEYDKMGVRGSNTSQLILDNVRVPKQNLLGSPEKGFKQFLNTL
EEEEEEEECCCCCEEEECCHHHCCCCCCCCCCEEECCCCCCHHHHCCCCHHHHHHHHHHC
DGGRISIAALAVGIAQGAFEAALTYARERKQFGRPISYFQAIQFKLADMAMEIELARNMV
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LKAAWLKDQGRPFTKEAAFAKLYASEMAFRTCNQSIQIHGGYGYMKEYGVERMLRDAKLM
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHH
EIGEGTSEIQRLVIARQLGIGKQALK
HHCCCHHHHHHHHHHHHHCCCHHHCC
>Mature Secondary Structure
MNFELTREQQMIRELARDFAKQEIAPHAEHVDRTGEFPIETFKKMGELGLLGIPFPESYG
CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCC
GSGGDTISYALSVEEIGKACGSTGLSYAAAVSLGAAPIYYFGTEEQKQEYLVPLATGRAL
CCCCCCEEEEEEHHHHHHHHCCCCCHHHHHHHHCCCEEEEECCCCCCHHEEEEEECCCCC
GAFGLTEPNAGSDAGGTRTKARSEGDSYVISGEKCWITNAGFARTVIVTAVTGIDDNGKN
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEECCCCHHEEEEEEEECCCCCCCE
IISAIIVPTDSEGFTIKSEYDKMGVRGSNTSQLILDNVRVPKQNLLGSPEKGFKQFLNTL
EEEEEEEECCCCCEEEECCHHHCCCCCCCCCCEEECCCCCCHHHHCCCCHHHHHHHHHHC
DGGRISIAALAVGIAQGAFEAALTYARERKQFGRPISYFQAIQFKLADMAMEIELARNMV
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LKAAWLKDQGRPFTKEAAFAKLYASEMAFRTCNQSIQIHGGYGYMKEYGVERMLRDAKLM
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHH
EIGEGTSEIQRLVIARQLGIGKQALK
HHCCCHHHHHHHHHHHHHCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]