Click here to switch to the map view.

The map label for this gene is ywiC [H]

Identifier: 52785833

GI number: 52785833

Start: 2020881

End: 2021603

Strand: Direct

Name: ywiC [H]

Synonym: BLi02079

Alternate gene names: 52785833

Gene position: 2020881-2021603 (Clockwise)

Preceding gene: 52785823

Following gene: 52785836

Centisome position: 47.86

GC content: 48.82

Gene sequence:

>723_bases
ATGAAAGTGTTCATACCGAAGCAGCACGGCGCCTGGGCGATGCTTGTCATCCCGTTTATTCTCGGCATGTTCGCCGGAGG
CGCAGATGTAAAGCATATTCCGCTGTTCTGCGGATGGCTGTTTCTATATCTTGCGGCATCTCCGGCTATGATGATGGTGA
AGAAGAAAAATATCGTTTACTATCAAAAATGGGTTCTCATCTACGGCATTCCGGCCGTCGTTTTCCTGCTTATTTCGGTC
CTGCTGGAGCCGCAGCTTGTGTATCTCGGTCTGCCGCTGTTTCCGCTCTTTCTCATCAATCTTTATTATGCGAAAAGAAA
CAACGACAGGGCGCTTTTAAATGATATAGCTGCAATCCTTGTTTTCAGCACGGGCGGGCTTGCGAGCTTCTGGATGGGAG
CGGGGAAGCTTGATGGTGAGGCATCGTTTGTTTTTATCCAGTCCGCTTTGTTTTTCACAGGGAGCGCTTTTTATGTCAAG
TCGATGATACGTGAAAAGAAAAACAATCGATTCAAGCTTTATTCATGGGGCTACCATGTTTTCCTGCCGTTCGTCTCGCT
GGCCGCAGGGGCAGGATGGGCGGTGATCGGCGTAGTGCCGAGCAGTCTTAGAGCGTGGTTTTTCCACGGGAGGAAACTGT
CGATTAAGATAATCGGAATCTCTGAGCTGGTGAATGCCTGTATCTTTATGGCCGTGTTGATCGTTTTTCTGCTGCAAACG
TAA

Upstream 100 bases:

>100_bases
CAGGGCGCAGTGATTTAATTCACACGACTGTATGCAAAATGTCACTGTGTAAAAAGAACGAAACTTTTATAATGTAATAG
AAAAGAAGGGAGGATGTGTG

Downstream 100 bases:

>100_bases
AAAACAAGGACACTGTGCTTCATGTCCTTGTTTGTTTTCGCTTTTTCAGTCGATATTGCAGATTTCGAGCGGGCAGTTTT
CACAGTCGATTTCGCGTTTT

Product: YwiC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MKVFIPKQHGAWAMLVIPFILGMFAGGADVKHIPLFCGWLFLYLAASPAMMMVKKKNIVYYQKWVLIYGIPAVVFLLISV
LLEPQLVYLGLPLFPLFLINLYYAKRNNDRALLNDIAAILVFSTGGLASFWMGAGKLDGEASFVFIQSALFFTGSAFYVK
SMIREKKNNRFKLYSWGYHVFLPFVSLAAGAGWAVIGVVPSSLRAWFFHGRKLSIKIIGISELVNACIFMAVLIVFLLQT

Sequences:

>Translated_240_residues
MKVFIPKQHGAWAMLVIPFILGMFAGGADVKHIPLFCGWLFLYLAASPAMMMVKKKNIVYYQKWVLIYGIPAVVFLLISV
LLEPQLVYLGLPLFPLFLINLYYAKRNNDRALLNDIAAILVFSTGGLASFWMGAGKLDGEASFVFIQSALFFTGSAFYVK
SMIREKKNNRFKLYSWGYHVFLPFVSLAAGAGWAVIGVVPSSLRAWFFHGRKLSIKIIGISELVNACIFMAVLIVFLLQT
>Mature_240_residues
MKVFIPKQHGAWAMLVIPFILGMFAGGADVKHIPLFCGWLFLYLAASPAMMMVKKKNIVYYQKWVLIYGIPAVVFLLISV
LLEPQLVYLGLPLFPLFLINLYYAKRNNDRALLNDIAAILVFSTGGLASFWMGAGKLDGEASFVFIQSALFFTGSAFYVK
SMIREKKNNRFKLYSWGYHVFLPFVSLAAGAGWAVIGVVPSSLRAWFFHGRKLSIKIIGISELVNACIFMAVLIVFLLQT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1626 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26880; Mature: 26880

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVFIPKQHGAWAMLVIPFILGMFAGGADVKHIPLFCGWLFLYLAASPAMMMVKKKNIVY
CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCEEE
YQKWVLIYGIPAVVFLLISVLLEPQLVYLGLPLFPLFLINLYYAKRNNDRALLNDIAAIL
EEHHHHHHHHHHHHHHHHHHHHCCHHEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VFSTGGLASFWMGAGKLDGEASFVFIQSALFFTGSAFYVKSMIREKKNNRFKLYSWGYHV
HCCCCCHHHHHCCCCCCCCCEEEEEEEHHHHHCCHHHHHHHHHHHHCCCCEEEEECCHHH
FLPFVSLAAGAGWAVIGVVPSSLRAWFFHGRKLSIKIIGISELVNACIFMAVLIVFLLQT
HHHHHHHHCCCCEEEEEECHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKVFIPKQHGAWAMLVIPFILGMFAGGADVKHIPLFCGWLFLYLAASPAMMMVKKKNIVY
CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCEEE
YQKWVLIYGIPAVVFLLISVLLEPQLVYLGLPLFPLFLINLYYAKRNNDRALLNDIAAIL
EEHHHHHHHHHHHHHHHHHHHHCCHHEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VFSTGGLASFWMGAGKLDGEASFVFIQSALFFTGSAFYVKSMIREKKNNRFKLYSWGYHV
HCCCCCHHHHHCCCCCCCCCEEEEEEEHHHHHCCHHHHHHHHHHHHCCCCEEEEECCHHH
FLPFVSLAAGAGWAVIGVVPSSLRAWFFHGRKLSIKIIGISELVNACIFMAVLIVFLLQT
HHHHHHHHCCCCEEEEEECHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8846791; 9384377 [H]