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The map label for this gene is arfM [H]

Identifier: 52785832

GI number: 52785832

Start: 2020264

End: 2020731

Strand: Reverse

Name: arfM [H]

Synonym: BLi02078

Alternate gene names: 52785832

Gene position: 2020731-2020264 (Counterclockwise)

Preceding gene: 52785834

Following gene: 52785831

Centisome position: 47.85

GC content: 41.45

Gene sequence:

>468_bases
ATGGACCGGTTTGACTACTTATTGTTTCTGAAAAATCTTCCTATGTTTTTCGGAGTACCCCTTCCGATCATCAAAAAGCT
GCTGAAGAACGGTAAGGTGATAGATATCCAACCGTCTCAGCATTCGCGATCGTTCCTTCATTCGCAATCCGTCTATTTTG
TTTTAAAAGGAGAAGTGCATTTTTCCGACAGAAGGCTTCCGGAAGAATCACGGACGATCGCCGAGTGGGAAAAAGGCGAT
GTTTTTCCTATTGATCAAAAAGGCGAACCTTTCTTATCTCCGTTTATTTCAGTCAATACTGCCTCTGAAACCGCCGTACT
TGAAATACCGTTTCATAATTTCAAAAAAATGATGACTTATAACCGCCAATTACAGACGAACTTTCTCATGTTGCTCCAGC
AGAATTTATTTTTTTCATACCAGCTTTTTTTGCGCTACCTCAACTCCTCCGCAGAAGACGACGTGTGA

Upstream 100 bases:

>100_bases
TACACAGTGACATTTTGCATACAGTCGTGTGAATTAAATCACTGCGCCCTGCAGCCCGGCGCTTTATACTAAAAGCCAAT
ATAGAGAAGGAGGATATACC

Downstream 100 bases:

>100_bases
GAAGGGCCTCTCCCCTTCTTTCTCTTCTTTTTTCCAAATGTGATCTACTTAACTTTTTTTCTCCTGCATTTCCGCTACGA
TACACATGAATGCAAACGAA

Product: ArfM

Products: NA

Alternate protein names: Anaerobic respiration and fermentation modulator [H]

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MDRFDYLLFLKNLPMFFGVPLPIIKKLLKNGKVIDIQPSQHSRSFLHSQSVYFVLKGEVHFSDRRLPEESRTIAEWEKGD
VFPIDQKGEPFLSPFISVNTASETAVLEIPFHNFKKMMTYNRQLQTNFLMLLQQNLFFSYQLFLRYLNSSAEDDV

Sequences:

>Translated_155_residues
MDRFDYLLFLKNLPMFFGVPLPIIKKLLKNGKVIDIQPSQHSRSFLHSQSVYFVLKGEVHFSDRRLPEESRTIAEWEKGD
VFPIDQKGEPFLSPFISVNTASETAVLEIPFHNFKKMMTYNRQLQTNFLMLLQQNLFFSYQLFLRYLNSSAEDDV
>Mature_155_residues
MDRFDYLLFLKNLPMFFGVPLPIIKKLLKNGKVIDIQPSQHSRSFLHSQSVYFVLKGEVHFSDRRLPEESRTIAEWEKGD
VFPIDQKGEPFLSPFISVNTASETAVLEIPFHNFKKMMTYNRQLQTNFLMLLQQNLFFSYQLFLRYLNSSAEDDV

Specific function: Activates, in anaerobic conditions, the transcription of the fermentative operons lctEP and alsDS, of the hmp gene encoding a flavohemoglobin-like protein, the nitrite reductase operon nasDE and the heme biosynthesis genes hemN and hemZ [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018490
- InterPro:   IPR014710 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18245; Mature: 18245

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRFDYLLFLKNLPMFFGVPLPIIKKLLKNGKVIDIQPSQHSRSFLHSQSVYFVLKGEVH
CCHHHHHHHHHCCHHHHCCCHHHHHHHHHCCCEEEECCCHHHHHHHHCCCEEEEEECEEE
FSDRRLPEESRTIAEWEKGDVFPIDQKGEPFLSPFISVNTASETAVLEIPFHNFKKMMTY
ECCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEECCCCEEEEEECHHHHHHHHHH
NRQLQTNFLMLLQQNLFFSYQLFLRYLNSSAEDDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MDRFDYLLFLKNLPMFFGVPLPIIKKLLKNGKVIDIQPSQHSRSFLHSQSVYFVLKGEVH
CCHHHHHHHHHCCHHHHCCCHHHHHHHHHCCCEEEECCCHHHHHHHHCCCEEEEEECEEE
FSDRRLPEESRTIAEWEKGDVFPIDQKGEPFLSPFISVNTASETAVLEIPFHNFKKMMTY
ECCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEECCCCEEEEEECHHHHHHHHHH
NRQLQTNFLMLLQQNLFFSYQLFLRYLNSSAEDDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]