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The map label for this gene is pqqE [H]

Identifier: 52785831

GI number: 52785831

Start: 2019046

End: 2020149

Strand: Reverse

Name: pqqE [H]

Synonym: BLi02077

Alternate gene names: 52785831

Gene position: 2020149-2019046 (Counterclockwise)

Preceding gene: 52785832

Following gene: 52785830

Centisome position: 47.84

GC content: 50.18

Gene sequence:

>1104_bases
ATGATACTTTGCGATTTCGACAAGTCTCCGTTTATCGTCATTTGGGAGCTGACAAGGGCTTGCGAGCTCAAGTGCCTTCA
TTGCCGGGCATCGGCTCAAAATAAACGCGATCCTCGGGAGCTATCCCTGAAAGAGGGAAAAGATTTAATCGATCAAATTC
ATGCGATGGACAATCCCCTCCTCGTGCTTACAGGAGGCGATCCTTTAATGAGAGACGACGTATTCGCCATTATTGAATAT
GCCGTCCAAAAAGGGGTTCGCGTCTCCATGACCCCGAGTGCCACGCCGAATGTTACAAGAGAAGCGATTCAATCAGCAAA
AGAAATCGGGTTATCCCGATGGGCGTTCAGCTTGGACGGCCCGACCCGGGAGATTCATGATCATTTTCGGGGAACGGACG
GGTCTTTTGACCTGACTATGAAGGCCATTCGCTACATTCATGAATGTCAGCTGCCTCTGCAGATTAATACCGTCATATCC
TCCTATAACATCGATTACCTGGATGAAATGGCAAAGCTGATCAAAGAATTGAACTGCGTACTATGGAGTGTGTTTTTTCT
CGTCCCGACAGGCCGCGCGAAGCGGGAAGATATGATTTCCCCGGTGGACCATGAAAAAGTCTTTCTCTGGCTCAGCCGTT
TGGCAAAAGAAGCGCCTTTTGACATCAAAACGACAGCAGCCCAGCACTACCGGCGGGTCGTCATTCAGCAAAAAATGCGG
GAAGCGAAAGACCCCCACATGAAAATCCGCTATGAACACGCATTGCAGAAAGGAAAAATGGATGCCATCGGCGGATTGGG
CCGGGCTCCGAAAGGTGTGAACGATGGCAACGGGTTCATGTTTATCTCCCATATCGGTGATGTATATCCAAGCGGACTCC
TGCCGGTTAAAGCCGGAAACATCCGCGAACAGCCGCTGGCTGAGATTTACCGCGAATCACCGATCTTTAAGGATCTTCGA
AATCCGGACGGATTTAAAGGGAAATGCGGCGTCTGTGAATTCCGTCATGTGTGCGGCGGTTCGCGCTCGCGTGCTTATGC
TCTGACAGGCGATTACCTAGAAAGCGATCCGAGCTGCATTTATATTCCGAAGGCTTTGCGCTAA

Upstream 100 bases:

>100_bases
CTTCTTTCTCTTCTTTTTTCCAAATGTGATCTACTTAACTTTTTTTCTCCTGCATTTCCGCTACGATACACATGAATGCA
AACGAAAGGACAGATGAAAG

Downstream 100 bases:

>100_bases
AAAAATGTGATGTACGTCACATTTTTTTCAGCTTCCTTGTATTACGGTATAGATGAGAATGATCATCACTATCAAAGGAT
GTGATCCCTTGCATAAAAAA

Product: moaA/nifB/pqqE family protein

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MILCDFDKSPFIVIWELTRACELKCLHCRASAQNKRDPRELSLKEGKDLIDQIHAMDNPLLVLTGGDPLMRDDVFAIIEY
AVQKGVRVSMTPSATPNVTREAIQSAKEIGLSRWAFSLDGPTREIHDHFRGTDGSFDLTMKAIRYIHECQLPLQINTVIS
SYNIDYLDEMAKLIKELNCVLWSVFFLVPTGRAKREDMISPVDHEKVFLWLSRLAKEAPFDIKTTAAQHYRRVVIQQKMR
EAKDPHMKIRYEHALQKGKMDAIGGLGRAPKGVNDGNGFMFISHIGDVYPSGLLPVKAGNIREQPLAEIYRESPIFKDLR
NPDGFKGKCGVCEFRHVCGGSRSRAYALTGDYLESDPSCIYIPKALR

Sequences:

>Translated_367_residues
MILCDFDKSPFIVIWELTRACELKCLHCRASAQNKRDPRELSLKEGKDLIDQIHAMDNPLLVLTGGDPLMRDDVFAIIEY
AVQKGVRVSMTPSATPNVTREAIQSAKEIGLSRWAFSLDGPTREIHDHFRGTDGSFDLTMKAIRYIHECQLPLQINTVIS
SYNIDYLDEMAKLIKELNCVLWSVFFLVPTGRAKREDMISPVDHEKVFLWLSRLAKEAPFDIKTTAAQHYRRVVIQQKMR
EAKDPHMKIRYEHALQKGKMDAIGGLGRAPKGVNDGNGFMFISHIGDVYPSGLLPVKAGNIREQPLAEIYRESPIFKDLR
NPDGFKGKCGVCEFRHVCGGSRSRAYALTGDYLESDPSCIYIPKALR
>Mature_367_residues
MILCDFDKSPFIVIWELTRACELKCLHCRASAQNKRDPRELSLKEGKDLIDQIHAMDNPLLVLTGGDPLMRDDVFAIIEY
AVQKGVRVSMTPSATPNVTREAIQSAKEIGLSRWAFSLDGPTREIHDHFRGTDGSFDLTMKAIRYIHECQLPLQINTVIS
SYNIDYLDEMAKLIKELNCVLWSVFFLVPTGRAKREDMISPVDHEKVFLWLSRLAKEAPFDIKTTAAQHYRRVVIQQKMR
EAKDPHMKIRYEHALQKGKMDAIGGLGRAPKGVNDGNGFMFISHIGDVYPSGLLPVKAGNIREQPLAEIYRESPIFKDLR
NPDGFKGKCGVCEFRHVCGGSRSRAYALTGDYLESDPSCIYIPKALR

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 41514; Mature: 41514

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILCDFDKSPFIVIWELTRACELKCLHCRASAQNKRDPRELSLKEGKDLIDQIHAMDNPL
CEEECCCCCCEEEEEEECHHHCEEEEEECCCCCCCCCCHHCCHHCCHHHHHHHHHCCCCE
LVLTGGDPLMRDDVFAIIEYAVQKGVRVSMTPSATPNVTREAIQSAKEIGLSRWAFSLDG
EEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCHHHEEEECCC
PTREIHDHFRGTDGSFDLTMKAIRYIHECQLPLQINTVISSYNIDYLDEMAKLIKELNCV
CHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHCCCHHHHHHHHHHHHHHHH
LWSVFFLVPTGRAKREDMISPVDHEKVFLWLSRLAKEAPFDIKTTAAQHYRRVVIQQKMR
HHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
EAKDPHMKIRYEHALQKGKMDAIGGLGRAPKGVNDGNGFMFISHIGDVYPSGLLPVKAGN
HHCCCCEEEEHHHHHHCCCCHHHCCCCCCCCCCCCCCCEEEEEHHHHHCCCCCEEECCCC
IREQPLAEIYRESPIFKDLRNPDGFKGKCGVCEFRHVCGGSRSRAYALTGDYLESDPSCI
CCCCHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCHHCCCCCEE
YIPKALR
ECCCCCC
>Mature Secondary Structure
MILCDFDKSPFIVIWELTRACELKCLHCRASAQNKRDPRELSLKEGKDLIDQIHAMDNPL
CEEECCCCCCEEEEEEECHHHCEEEEEECCCCCCCCCCHHCCHHCCHHHHHHHHHCCCCE
LVLTGGDPLMRDDVFAIIEYAVQKGVRVSMTPSATPNVTREAIQSAKEIGLSRWAFSLDG
EEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCHHHEEEECCC
PTREIHDHFRGTDGSFDLTMKAIRYIHECQLPLQINTVISSYNIDYLDEMAKLIKELNCV
CHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHCCCHHHHHHHHHHHHHHHH
LWSVFFLVPTGRAKREDMISPVDHEKVFLWLSRLAKEAPFDIKTTAAQHYRRVVIQQKMR
HHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
EAKDPHMKIRYEHALQKGKMDAIGGLGRAPKGVNDGNGFMFISHIGDVYPSGLLPVKAGN
HHCCCCEEEEHHHHHHCCCCHHHCCCCCCCCCCCCCCCEEEEEHHHHHCCCCCEEECCCC
IREQPLAEIYRESPIFKDLRNPDGFKGKCGVCEFRHVCGGSRSRAYALTGDYLESDPSCI
CCCCHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCHHCCCCCEE
YIPKALR
ECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA