Click here to switch to the map view.

The map label for this gene is xylB [H]

Identifier: 52785816

GI number: 52785816

Start: 2001023

End: 2002630

Strand: Direct

Name: xylB [H]

Synonym: BLi02062

Alternate gene names: 52785816

Gene position: 2001023-2002630 (Clockwise)

Preceding gene: 52785814

Following gene: 52785817

Centisome position: 47.39

GC content: 41.04

Gene sequence:

>1608_bases
GTGAAAGCGAATCGAGTAAACATCAAGCAAGCCATAACTGAGGGAGAAACATCACTTGGAATTGAATTCGGATCCACACG
TATTAAAGCAGTGTTGATTGATAGCAGTTTTGAAACAATCGCATCTGGAAGCTATGAGTGGGAAAACCTCTTGGAAGATG
GATTTTGGACGTACAACTTGGTAGATATTATCACTGGATTGCGAACAGCTTATAGTGAAATGAAGAATGAAGTTGAACGA
AATTATGGCATCACCATTCGCAAAATCGGTTCTATTGGAATTTCTGCAATGATGCATGGGTATATGGCTTTTGACAAAAC
AGGGGAGCTGCTTGTTCCGTTTCGAACTTGGCGTAACTCAACAACCGGTGCTGCAGCAAAAGAATTAACTGATCAATTTC
AATTCAATATCCCCGAACGGTGGAGTATTGCTCACCTTTATCAAGCGATATTAAATGAAGAGAAGCATTTGCCTCGCATT
GACTATATCACCACCTTAGCCGGGTACATTCACTGGTTACTGACTGGTAATAAAGCAATTGGCATTGGAGATGCTTCGGG
CATGTTCCCGATTGATGAATCAACGCAAAATTACAATGAATCGATGGTCAAGCAGTTTGATGAACTGATTTCGAACAAAG
GCTACCCTTGGAAGCTGAAGGATATTCTTCCTAAAGTTTATATTTCAGGCGAGCAGGCTGGTGAATTAACCGAAATTGGT
GCAAAAATTCTGGATCAGTCAAAAAATTTACAACCAGGCATTCCAATTTGTCCACCGGAAGGCGATGCTGGAACAGGAAT
GGTTGCTACGAATAGTGTGAGGAAACGCACTGGAAACATTTCGGTGGGAACTTCAGTTTTTGCCATGATTGTATTAGAAA
AAGAACTTTCAAAAGTATATCCAGAAATTGATTTGGTCACAACGCCAAACGGCAGTCCGGTTGGAATGGTTCATGCGAAT
AACTGCTCAAGCGATATTAATGCTTGGCTAGGATTGTTTCGTGAATTTTTTGAAGCAATGGGACAAAAGATTGAAACGAA
TAAATTATTCGAAGTGATGTTAAATAAAGCTTTGGAAGCTGACTCAGATGGCGGCGGTTTGCTAAGCTACGGCTATTTCT
CCGGTGAAAATATTACGGGATTAGAAAAAGGCCGGCCATTATTTGTCCGCTCACCAGAGAGTCGTTTCAATTTAGCAAAC
TTCATGCGGACACACCTTTTTACAGCCTTTGCTGCTTTGAAAATCGGAATGGATATTTTGACCAAAGAGGAAAAAATTGA
AATCGATAGCATTTTAGCTCACGGCGGTTTATTCAAAACCCCTCTTGTCGGACAAAAAATTGTTGCAGCTGCAATGAATA
CGCCGGTATCAGTTATGGAAACAGCCGGAGAAGGCGGTGCGTGGGGAATGGCTATTCTTGCTTCTTACATGATGAACAAA
GGTCAAGAAGAGAGCTTAGAAGACTTCCTCGACAAAAAAGTCTTTGAAGAGGATGCCGGGCAGGAAATTTACCCTGATCA
ATTAGATGTAGAAGGATTTGAAGCATTTATCGAACGGTACAAAAAAGGTTTAATGATTGAGCAGGCCGCTGTAGACCATT
TGATTTAA

Upstream 100 bases:

>100_bases
GTACGTACAAAAAATATACTAAGGTTGTAATAAAGTTAAGCGGAAAGGAAAATGCTTTCTTTCGAATTATAATGAAATCG
CTATCAGAGGGGGGGATTAC

Downstream 100 bases:

>100_bases
TGGAGGGATTGACGTGCTAGAACAACTGAAAGAAGAAGTATTACAAGCGAATTTGGACCTGCCTAAATACGGACTCGTGA
AATACACATGGGGAAATGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Xylulokinase [H]

Number of amino acids: Translated: 535; Mature: 535

Protein sequence:

>535_residues
MKANRVNIKQAITEGETSLGIEFGSTRIKAVLIDSSFETIASGSYEWENLLEDGFWTYNLVDIITGLRTAYSEMKNEVER
NYGITIRKIGSIGISAMMHGYMAFDKTGELLVPFRTWRNSTTGAAAKELTDQFQFNIPERWSIAHLYQAILNEEKHLPRI
DYITTLAGYIHWLLTGNKAIGIGDASGMFPIDESTQNYNESMVKQFDELISNKGYPWKLKDILPKVYISGEQAGELTEIG
AKILDQSKNLQPGIPICPPEGDAGTGMVATNSVRKRTGNISVGTSVFAMIVLEKELSKVYPEIDLVTTPNGSPVGMVHAN
NCSSDINAWLGLFREFFEAMGQKIETNKLFEVMLNKALEADSDGGGLLSYGYFSGENITGLEKGRPLFVRSPESRFNLAN
FMRTHLFTAFAALKIGMDILTKEEKIEIDSILAHGGLFKTPLVGQKIVAAAMNTPVSVMETAGEGGAWGMAILASYMMNK
GQEESLEDFLDKKVFEEDAGQEIYPDQLDVEGFEAFIERYKKGLMIEQAAVDHLI

Sequences:

>Translated_535_residues
MKANRVNIKQAITEGETSLGIEFGSTRIKAVLIDSSFETIASGSYEWENLLEDGFWTYNLVDIITGLRTAYSEMKNEVER
NYGITIRKIGSIGISAMMHGYMAFDKTGELLVPFRTWRNSTTGAAAKELTDQFQFNIPERWSIAHLYQAILNEEKHLPRI
DYITTLAGYIHWLLTGNKAIGIGDASGMFPIDESTQNYNESMVKQFDELISNKGYPWKLKDILPKVYISGEQAGELTEIG
AKILDQSKNLQPGIPICPPEGDAGTGMVATNSVRKRTGNISVGTSVFAMIVLEKELSKVYPEIDLVTTPNGSPVGMVHAN
NCSSDINAWLGLFREFFEAMGQKIETNKLFEVMLNKALEADSDGGGLLSYGYFSGENITGLEKGRPLFVRSPESRFNLAN
FMRTHLFTAFAALKIGMDILTKEEKIEIDSILAHGGLFKTPLVGQKIVAAAMNTPVSVMETAGEGGAWGMAILASYMMNK
GQEESLEDFLDKKVFEEDAGQEIYPDQLDVEGFEAFIERYKKGLMIEQAAVDHLI
>Mature_535_residues
MKANRVNIKQAITEGETSLGIEFGSTRIKAVLIDSSFETIASGSYEWENLLEDGFWTYNLVDIITGLRTAYSEMKNEVER
NYGITIRKIGSIGISAMMHGYMAFDKTGELLVPFRTWRNSTTGAAAKELTDQFQFNIPERWSIAHLYQAILNEEKHLPRI
DYITTLAGYIHWLLTGNKAIGIGDASGMFPIDESTQNYNESMVKQFDELISNKGYPWKLKDILPKVYISGEQAGELTEIG
AKILDQSKNLQPGIPICPPEGDAGTGMVATNSVRKRTGNISVGTSVFAMIVLEKELSKVYPEIDLVTTPNGSPVGMVHAN
NCSSDINAWLGLFREFFEAMGQKIETNKLFEVMLNKALEADSDGGGLLSYGYFSGENITGLEKGRPLFVRSPESRFNLAN
FMRTHLFTAFAALKIGMDILTKEEKIEIDSILAHGGLFKTPLVGQKIVAAAMNTPVSVMETAGEGGAWGMAILASYMMNK
GQEESLEDFLDKKVFEEDAGQEIYPDQLDVEGFEAFIERYKKGLMIEQAAVDHLI

Specific function: Unknown

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.17 [H]

Molecular weight: Translated: 59249; Mature: 59249

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKANRVNIKQAITEGETSLGIEFGSTRIKAVLIDSSFETIASGSYEWENLLEDGFWTYNL
CCCCHHHHHHHHHCCCCCEEEEECCCEEEEEEECCCHHHHHCCCCCHHHHHHCCCCCHHH
VDIITGLRTAYSEMKNEVERNYGITIRKIGSIGISAMMHGYMAFDKTGELLVPFRTWRNS
HHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEEHHHCCC
TTGAAAKELTDQFQFNIPERWSIAHLYQAILNEEKHLPRIDYITTLAGYIHWLLTGNKAI
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEE
GIGDASGMFPIDESTQNYNESMVKQFDELISNKGYPWKLKDILPKVYISGEQAGELTEIG
ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEHHHHCHHEEECCCCCCHHHHHH
AKILDQSKNLQPGIPICPPEGDAGTGMVATNSVRKRTGNISVGTSVFAMIVLEKELSKVY
HHHHHCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
PEIDLVTTPNGSPVGMVHANNCSSDINAWLGLFREFFEAMGQKIETNKLFEVMLNKALEA
CCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
DSDGGGLLSYGYFSGENITGLEKGRPLFVRSPESRFNLANFMRTHLFTAFAALKIGMDIL
CCCCCCEEEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKEEKIEIDSILAHGGLFKTPLVGQKIVAAAMNTPVSVMETAGEGGAWGMAILASYMMNK
CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHCC
GQEESLEDFLDKKVFEEDAGQEIYPDQLDVEGFEAFIERYKKGLMIEQAAVDHLI
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCC
>Mature Secondary Structure
MKANRVNIKQAITEGETSLGIEFGSTRIKAVLIDSSFETIASGSYEWENLLEDGFWTYNL
CCCCHHHHHHHHHCCCCCEEEEECCCEEEEEEECCCHHHHHCCCCCHHHHHHCCCCCHHH
VDIITGLRTAYSEMKNEVERNYGITIRKIGSIGISAMMHGYMAFDKTGELLVPFRTWRNS
HHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEEHHHCCC
TTGAAAKELTDQFQFNIPERWSIAHLYQAILNEEKHLPRIDYITTLAGYIHWLLTGNKAI
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEE
GIGDASGMFPIDESTQNYNESMVKQFDELISNKGYPWKLKDILPKVYISGEQAGELTEIG
ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEHHHHCHHEEECCCCCCHHHHHH
AKILDQSKNLQPGIPICPPEGDAGTGMVATNSVRKRTGNISVGTSVFAMIVLEKELSKVY
HHHHHCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
PEIDLVTTPNGSPVGMVHANNCSSDINAWLGLFREFFEAMGQKIETNKLFEVMLNKALEA
CCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
DSDGGGLLSYGYFSGENITGLEKGRPLFVRSPESRFNLANFMRTHLFTAFAALKIGMDIL
CCCCCCEEEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKEEKIEIDSILAHGGLFKTPLVGQKIVAAAMNTPVSVMETAGEGGAWGMAILASYMMNK
CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHCC
GQEESLEDFLDKKVFEEDAGQEIYPDQLDVEGFEAFIERYKKGLMIEQAAVDHLI
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]