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The map label for this gene is yraD [H]

Identifier: 52785708

GI number: 52785708

Start: 1911794

End: 1912093

Strand: Reverse

Name: yraD [H]

Synonym: BLi01950

Alternate gene names: 52785708

Gene position: 1912093-1911794 (Counterclockwise)

Preceding gene: 52785709

Following gene: 52785705

Centisome position: 45.28

GC content: 42.33

Gene sequence:

>300_bases
ATGAACGAATTCATCCAAAACATGACAGGCATGGGCGCGATGACTGAACAAGTCATTGCCACCGATTTTTTAATCTCGGC
AAAAACCGGTGTCAAAAACATTGCCACAGCTATCACGGAAACATCTTCTCCAGAAGTGCGCGAAACGCTTAAGCAGTATT
TAAACGACGCGATTGACACCCATGAACAGATCACAAACTATATGATTTCCAAAGGGTATTACCATCCTGCGAATTTATCT
GAACAAATTCAGATTGATACCAAAGCTGCCGAAACGGCTAAAGATCTTCCGCAACTGTAA

Upstream 100 bases:

>100_bases
AGGATCAAGAGCTTCGCGACATCTTGGAGCGTGATGCATCCCAAACAAAGCATCAGATCGAGCATTTACAAGGTCTATTG
TCAGTGAGAGGTGAAACCGT

Downstream 100 bases:

>100_bases
TAAAAACGTGTGAATACCCCGCAGTCCATACAGCGGGGTTTTCATACTTAAACGGTTTCTTCTTTTTTCTCATCATAATC
AATGACTGCCTTTGGCAGCG

Product: YraD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MNEFIQNMTGMGAMTEQVIATDFLISAKTGVKNIATAITETSSPEVRETLKQYLNDAIDTHEQITNYMISKGYYHPANLS
EQIQIDTKAAETAKDLPQL

Sequences:

>Translated_99_residues
MNEFIQNMTGMGAMTEQVIATDFLISAKTGVKNIATAITETSSPEVRETLKQYLNDAIDTHEQITNYMISKGYYHPANLS
EQIQIDTKAAETAKDLPQL
>Mature_99_residues
MNEFIQNMTGMGAMTEQVIATDFLISAKTGVKNIATAITETSSPEVRETLKQYLNDAIDTHEQITNYMISKGYYHPANLS
EQIQIDTKAAETAKDLPQL

Specific function: Unknown

COG id: COG5577

COG function: function code M; Spore coat protein

Gene ontology:

Cell location: Spore wall, spore coat [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CotF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012851 [H]

Pfam domain/function: PF07875 Coat_F [H]

EC number: NA

Molecular weight: Translated: 10998; Mature: 10998

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEFIQNMTGMGAMTEQVIATDFLISAKTGVKNIATAITETSSPEVRETLKQYLNDAIDT
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
HEQITNYMISKGYYHPANLSEQIQIDTKAAETAKDLPQL
HHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHCCCCC
>Mature Secondary Structure
MNEFIQNMTGMGAMTEQVIATDFLISAKTGVKNIATAITETSSPEVRETLKQYLNDAIDT
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
HEQITNYMISKGYYHPANLSEQIQIDTKAAETAKDLPQL
HHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9141695; 9384377 [H]