Click here to switch to the map view.

The map label for this gene is yjcL [H]

Identifier: 52785061

GI number: 52785061

Start: 1294664

End: 1295854

Strand: Reverse

Name: yjcL [H]

Synonym: BLi01291

Alternate gene names: 52785061

Gene position: 1295854-1294664 (Counterclockwise)

Preceding gene: 52785065

Following gene: 52785058

Centisome position: 30.69

GC content: 51.13

Gene sequence:

>1191_bases
ATGAATTCTTCATTGATTTCACCGGATGACGTGTGGGTGCTTTGGGGATTTATCGCGGTGTGGGCTGCTGTGAGTATTTA
TTTAGAGCAGCGGTTTCGCTGGGCTGCCGCTGTATCGGGGGCCGTATTGGCACTGGGCGGATCGATGCTGTTTACTAATG
CAGGGATTCTTCCGGCCGAGTCGCCCTTCTATGATGCGGTGTGGTCCTATGTTGTTCCGCTTGCGATTCCTTTGCTGCTT
TTTCAAATCAATGTGCGGAAGATCCTGAAAGAAAGCGGCAGACTTTTGATGATGTTTTGCATCAGCGCGCTGGGCACTGC
GGCCGGAAGCGTCATTGCTTTTTTTCTGTTTAAGGATCAGATTCCGCACCTTGATAAAATCGGCGGCATGATCAGCGCCT
CTTATATCGGGGGAGGCGTGAATTTTGCAGCGATGGCCGCCAAGTTCTCAACTCCCGGTGAGTATGTATCATCGACGGTG
GTTGCGGATAATTTTATGATGGCTTTTCTTTTTTTCATTTTAATGGGGATACCGGCGCTAACATGGTTTCAAAAACGCTT
CGGCGTTCAGGAAGTGGCGGGCGGCCGCGAAAATCAGGCGGAAGCCTATTGGAAGAGAAAAGACATCTCCTTGCAGGACA
TCGCTTTAAACATCGGAACCGCCTTTGCGATCGTTGCTGTGTCTGTAAAAGCAGCGGCTTTTTTCAAGGAACGTTTTTCT
TCTGACGGCGGATTTCAGTTTCTTGCCTTTATTCTGGGCGACCAGTTCCTGCTGCTGACGACGCTGACAATTTTGCTGAC
GGTAGTGTTTCCCCGCTATTTTGAACGGCTGCGCGGCTCACAGGAGATCGGGACTTATTTGATTTACTTATTCTTTGTCG
TGATTGGCATTCCGGCGGATTTGCGGATCATCCTCATGAACGCCCCGCTCCTCCTGGCATTTGTCTTTGTGATTGCCATG
TCCAACCTGCTCGTATCGCTCTTCTGCGGAAAGCTGTTTCGTTTTCGGCTCGATGAAATTCTCTTGGCTTGCAACGCATC
TGTCGGCGGACCGACGACAGCGGCGGCGATGGCGATTGCCAAAGGCTGGCGGGGCCTCGTTGCTCCCGTAATGCTGGTCG
GGACGTTCGGATATCTGATCGGCAATTATGTCGGCACCTTCTTGGGCACATGGTTTTCCACCCTGTTATAA

Upstream 100 bases:

>100_bases
GGTGACTTTTTTTATGATCATTGATCAATTAGGCATTCCGTTTTACACTATTTAATTATCAGATAATTCAAAACACTAAC
CGGAAACAGGGGGTTTTTTT

Downstream 100 bases:

>100_bases
ATGGCAAAAAAAGGCGCGGATTCCTTGACGAATCCGCGCCTTCTTTTATGAACGGGCAAGCGCTCCGGATACGGCTTCCA
ACGCTTGGGCAAAGTCCGCC

Product: YjcL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MNSSLISPDDVWVLWGFIAVWAAVSIYLEQRFRWAAAVSGAVLALGGSMLFTNAGILPAESPFYDAVWSYVVPLAIPLLL
FQINVRKILKESGRLLMMFCISALGTAAGSVIAFFLFKDQIPHLDKIGGMISASYIGGGVNFAAMAAKFSTPGEYVSSTV
VADNFMMAFLFFILMGIPALTWFQKRFGVQEVAGGRENQAEAYWKRKDISLQDIALNIGTAFAIVAVSVKAAAFFKERFS
SDGGFQFLAFILGDQFLLLTTLTILLTVVFPRYFERLRGSQEIGTYLIYLFFVVIGIPADLRIILMNAPLLLAFVFVIAM
SNLLVSLFCGKLFRFRLDEILLACNASVGGPTTAAAMAIAKGWRGLVAPVMLVGTFGYLIGNYVGTFLGTWFSTLL

Sequences:

>Translated_396_residues
MNSSLISPDDVWVLWGFIAVWAAVSIYLEQRFRWAAAVSGAVLALGGSMLFTNAGILPAESPFYDAVWSYVVPLAIPLLL
FQINVRKILKESGRLLMMFCISALGTAAGSVIAFFLFKDQIPHLDKIGGMISASYIGGGVNFAAMAAKFSTPGEYVSSTV
VADNFMMAFLFFILMGIPALTWFQKRFGVQEVAGGRENQAEAYWKRKDISLQDIALNIGTAFAIVAVSVKAAAFFKERFS
SDGGFQFLAFILGDQFLLLTTLTILLTVVFPRYFERLRGSQEIGTYLIYLFFVVIGIPADLRIILMNAPLLLAFVFVIAM
SNLLVSLFCGKLFRFRLDEILLACNASVGGPTTAAAMAIAKGWRGLVAPVMLVGTFGYLIGNYVGTFLGTWFSTLL
>Mature_396_residues
MNSSLISPDDVWVLWGFIAVWAAVSIYLEQRFRWAAAVSGAVLALGGSMLFTNAGILPAESPFYDAVWSYVVPLAIPLLL
FQINVRKILKESGRLLMMFCISALGTAAGSVIAFFLFKDQIPHLDKIGGMISASYIGGGVNFAAMAAKFSTPGEYVSSTV
VADNFMMAFLFFILMGIPALTWFQKRFGVQEVAGGRENQAEAYWKRKDISLQDIALNIGTAFAIVAVSVKAAAFFKERFS
SDGGFQFLAFILGDQFLLLTTLTILLTVVFPRYFERLRGSQEIGTYLIYLFFVVIGIPADLRIILMNAPLLLAFVFVIAM
SNLLVSLFCGKLFRFRLDEILLACNASVGGPTTAAAMAIAKGWRGLVAPVMLVGTFGYLIGNYVGTFLGTWFSTLL

Specific function: Unknown

COG id: COG5505

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008537 [H]

Pfam domain/function: PF05684 DUF819 [H]

EC number: NA

Molecular weight: Translated: 43253; Mature: 43253

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]