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The map label for this gene is gdhB [H]

Identifier: 52784783

GI number: 52784783

Start: 1013813

End: 1014877

Strand: Direct

Name: gdhB [H]

Synonym: BLi01011

Alternate gene names: 52784783

Gene position: 1013813-1014877 (Clockwise)

Preceding gene: 52784782

Following gene: 52784784

Centisome position: 24.01

GC content: 52.39

Gene sequence:

>1065_bases
ATGAAAAAAGGATTCCTGATGTTGATCATGCTGTTTTTTCTAGGTGCATGCACGGAAGGCCGGGATTTTGATGCTGAATA
TGAAGCGACAAGCGCGAAAGAAGGCGGAAGCGGCGCCGAAGTCATCGCAGATCGCCTGGATGTGCCTTGGACGATCGCTC
ATACTGGCGAGACCTTTTACATTACGGAAAGAAACGGGGGAATTGTGTCCATTGCTGACGGCAAAAAGGAGCGCATGCAG
CTTCAGCTGAAAAAGCCCGTTCATCAAGAAGGGGAGGGCGGGCTGCTCGGATTTGTACTCCATCCGGATTTTAGAAACAG
TCAGGAGGCGTACGTTTATCATACATACAAAGACGGGAGCCATCTGAAAAACCGGATCGTAAAATTGACGCTTGACCGCC
TCACTTGGACAGAAACGGATGAACTGCTTGCCGATTTGCCTGGAGGCGCGATTCATAACGGCGGCCGGATGGCGATCGGG
CCCGATCAAAAGCTGTACATCACGACAGGCGATGCAGGGGAAAGGGAATGGGCCCAGCAGCCTGAAAAGATGGCGGGTGT
GATTCTAAGGATGGAGCTTGATGGTACGATACCGGCTGATCAGCCCTTTAGCTCGTCTTATGTATACAGTTTCGGGCACC
GGAATCCGCAAGGCCTCGCATGGATCGGCCGACAGCTTTACAGCTCCGAACACGGGCAGTCTGGACATGATGAAGTAAAT
AAAATAGAACCCGGAGCCAATTATGGCTGGCCGGTGATTGAAGAAAGCGATGAGAAGCAGGGAATGAAGGCGCCGCTCAT
ACATTCGGGAGAAAAAACGCGGGCGCCATCCGGTTTAGCACAGAAAGGGGACGTCCTCTATATGGCCGGGCTGCGGGGAG
AGGGTGTTTTCCAGGTCGATCCGGCGGAAGCCAAAGTAGTCAAGTGGCTTGGCGGATACGGCAGAATCAGAGATGTGAAA
GTGATCGGCGATGATCTGTATTTCATTACGAACAATGGCGACGGAAGAGGCGAAAAAAAACAGACAGACGATCGGCTCAT
CCGCGTACCTCTGCCTGACAAGTAA

Upstream 100 bases:

>100_bases
GAAGCGCGTGTTTTTTAATAGGATTTTTTGAATGTTTAGTAGGGAATCATGCCGGTGCTCTTGAATGTATTCATCAAGAA
AGTCCTTTAAGGGGGAGACG

Downstream 100 bases:

>100_bases
CCTGTCTCGCCCGTTTGCGTTTAAGGATGCCGGAATCGTGGTAACTGAGCACTAAACAATGGTGAAGAGGTGAGACAAAT
GAATCCGGCAAACAGACAGA

Product: hypothetical protein

Products: NA

Alternate protein names: Glucose dehydrogenase B [pyrroloquinoline-quinone]; Soluble glucose dehydrogenase; s-GDH [H]

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MKKGFLMLIMLFFLGACTEGRDFDAEYEATSAKEGGSGAEVIADRLDVPWTIAHTGETFYITERNGGIVSIADGKKERMQ
LQLKKPVHQEGEGGLLGFVLHPDFRNSQEAYVYHTYKDGSHLKNRIVKLTLDRLTWTETDELLADLPGGAIHNGGRMAIG
PDQKLYITTGDAGEREWAQQPEKMAGVILRMELDGTIPADQPFSSSYVYSFGHRNPQGLAWIGRQLYSSEHGQSGHDEVN
KIEPGANYGWPVIEESDEKQGMKAPLIHSGEKTRAPSGLAQKGDVLYMAGLRGEGVFQVDPAEAKVVKWLGGYGRIRDVK
VIGDDLYFITNNGDGRGEKKQTDDRLIRVPLPDK

Sequences:

>Translated_354_residues
MKKGFLMLIMLFFLGACTEGRDFDAEYEATSAKEGGSGAEVIADRLDVPWTIAHTGETFYITERNGGIVSIADGKKERMQ
LQLKKPVHQEGEGGLLGFVLHPDFRNSQEAYVYHTYKDGSHLKNRIVKLTLDRLTWTETDELLADLPGGAIHNGGRMAIG
PDQKLYITTGDAGEREWAQQPEKMAGVILRMELDGTIPADQPFSSSYVYSFGHRNPQGLAWIGRQLYSSEHGQSGHDEVN
KIEPGANYGWPVIEESDEKQGMKAPLIHSGEKTRAPSGLAQKGDVLYMAGLRGEGVFQVDPAEAKVVKWLGGYGRIRDVK
VIGDDLYFITNNGDGRGEKKQTDDRLIRVPLPDK
>Mature_354_residues
MKKGFLMLIMLFFLGACTEGRDFDAEYEATSAKEGGSGAEVIADRLDVPWTIAHTGETFYITERNGGIVSIADGKKERMQ
LQLKKPVHQEGEGGLLGFVLHPDFRNSQEAYVYHTYKDGSHLKNRIVKLTLDRLTWTETDELLADLPGGAIHNGGRMAIG
PDQKLYITTGDAGEREWAQQPEKMAGVILRMELDGTIPADQPFSSSYVYSFGHRNPQGLAWIGRQLYSSEHGQSGHDEVN
KIEPGANYGWPVIEESDEKQGMKAPLIHSGEKTRAPSGLAQKGDVLYMAGLRGEGVFQVDPAEAKVVKWLGGYGRIRDVK
VIGDDLYFITNNGDGRGEKKQTDDRLIRVPLPDK

Specific function: Oxidizes glucose to gluconolactone [H]

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PQQ oxidoreductase gdhB family [H]

Homologues:

Organism=Homo sapiens, GI124248546, Length=257, Percent_Identity=28.4046692607004, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI187936955, Length=197, Percent_Identity=30.4568527918782, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI187936953, Length=197, Percent_Identity=30.4568527918782, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI1787060, Length=258, Percent_Identity=31.3953488372093, Blast_Score=106, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR019893
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: =1.1.5.2 [H]

Molecular weight: Translated: 39153; Mature: 39153

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKGFLMLIMLFFLGACTEGRDFDAEYEATSAKEGGSGAEVIADRLDVPWTIAHTGETFY
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCEEE
ITERNGGIVSIADGKKERMQLQLKKPVHQEGEGGLLGFVLHPDFRNSQEAYVYHTYKDGS
EEECCCCEEEECCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCH
HLKNRIVKLTLDRLTWTETDELLADLPGGAIHNGGRMAIGPDQKLYITTGDAGEREWAQQ
HHHHHEEEEEECCCCCCCHHHHHHHCCCCCEECCCEEEECCCCEEEEEECCCCCHHHHHC
PEKMAGVILRMELDGTIPADQPFSSSYVYSFGHRNPQGLAWIGRQLYSSEHGQSGHDEVN
HHHHEEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHH
KIEPGANYGWPVIEESDEKQGMKAPLIHSGEKTRAPSGLAQKGDVLYMAGLRGEGVFQVD
HCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEECCCCCCEEEEC
PAEAKVVKWLGGYGRIRDVKVIGDDLYFITNNGDGRGEKKQTDDRLIRVPLPDK
CCHHHHHHHHCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCEEECCCCCC
>Mature Secondary Structure
MKKGFLMLIMLFFLGACTEGRDFDAEYEATSAKEGGSGAEVIADRLDVPWTIAHTGETFY
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCEEE
ITERNGGIVSIADGKKERMQLQLKKPVHQEGEGGLLGFVLHPDFRNSQEAYVYHTYKDGS
EEECCCCEEEECCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCH
HLKNRIVKLTLDRLTWTETDELLADLPGGAIHNGGRMAIGPDQKLYITTGDAGEREWAQQ
HHHHHEEEEEECCCCCCCHHHHHHHCCCCCEECCCEEEECCCCEEEEEECCCCCHHHHHC
PEKMAGVILRMELDGTIPADQPFSSSYVYSFGHRNPQGLAWIGRQLYSSEHGQSGHDEVN
HHHHEEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHH
KIEPGANYGWPVIEESDEKQGMKAPLIHSGEKTRAPSGLAQKGDVLYMAGLRGEGVFQVD
HCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEECCCCCCEEEEC
PAEAKVVKWLGGYGRIRDVKVIGDDLYFITNNGDGRGEKKQTDDRLIRVPLPDK
CCHHHHHHHHCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2671663; 10366508; 10508152 [H]