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The map label for this gene is yhcB [H]

Identifier: 52784738

GI number: 52784738

Start: 965362

End: 965892

Strand: Direct

Name: yhcB [H]

Synonym: BLi00966

Alternate gene names: 52784738

Gene position: 965362-965892 (Clockwise)

Preceding gene: 52784737

Following gene: 52784739

Centisome position: 22.86

GC content: 53.11

Gene sequence:

>531_bases
ATGAAAATTTATGTTGTTTACGACAGTGAAGGCGAGCATACGAAAAAGCTGGCTGAAGCCATTGCAGAAGGCGCGGGGGA
ACATGATGCTGCAGACGTGCGGATCGATCATGTCAGCCAGGCGGATATTAGAAAGCTCGAAGAAATGGACGCTATCATCT
GGGGATGCCCGGGCCATTTCGGTACAATCAGCTCCGGATTAAAAACTTGGATCGACAGGCTGGGCTACCTTTGGGCGGAA
GGAAAGCTGATCAATAAGATCGGCGCAGTCTTCTGCACAACGGCGACGACCCACGGCGGTCTTGAGGCGACAATGCTCAA
CTTAATAACACCGATGCTTCATCAAGGCATGATGGTCGTCGGCTTGCCTGGAAATGTACCTGAAAATGCTTTATACGGGT
CTTATTACGGTGCAGGCATCACGTGTCCTGTCGACAGTGACGAATTGATCGGCGAGGAAGGCCTGGAGCTGGGCCGGGCT
TTAGGCAGACGCGTCGCCCAGGTGGCAGACCGCTTTACAGCAGGACAGTGA

Upstream 100 bases:

>100_bases
TCAGAAAAGACAAGCTGCGCAGGAAGAACAAAGCGCAGGAGCTGACATTGCTTCCGGCTCCTAAAGAAGCGAAAGAATCT
TAAAATGAGGAGGTTCTGAC

Downstream 100 bases:

>100_bases
GGAGCGATTTGACATGACCATTATACTGACCATCATCGCTGCTGTCCTCGTCATTATCGGTCTGGTGGTATTTAATGTGC
GGTCGGCGTCTTCTCAGGAT

Product: YhcB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MKIYVVYDSEGEHTKKLAEAIAEGAGEHDAADVRIDHVSQADIRKLEEMDAIIWGCPGHFGTISSGLKTWIDRLGYLWAE
GKLINKIGAVFCTTATTHGGLEATMLNLITPMLHQGMMVVGLPGNVPENALYGSYYGAGITCPVDSDELIGEEGLELGRA
LGRRVAQVADRFTAGQ

Sequences:

>Translated_176_residues
MKIYVVYDSEGEHTKKLAEAIAEGAGEHDAADVRIDHVSQADIRKLEEMDAIIWGCPGHFGTISSGLKTWIDRLGYLWAE
GKLINKIGAVFCTTATTHGGLEATMLNLITPMLHQGMMVVGLPGNVPENALYGSYYGAGITCPVDSDELIGEEGLELGRA
LGRRVAQVADRFTAGQ
>Mature_176_residues
MKIYVVYDSEGEHTKKLAEAIAEGAGEHDAADVRIDHVSQADIRKLEEMDAIIWGCPGHFGTISSGLKTWIDRLGYLWAE
GKLINKIGAVFCTTATTHGGLEATMLNLITPMLHQGMMVVGLPGNVPENALYGSYYGAGITCPVDSDELIGEEGLELGRA
LGRRVAQVADRFTAGQ

Specific function: Seems To Enhance The Formation And/Or Stability Of Noncovalent Complexes Between The Trp Repressor Protein And Operator-Bearing DNA. However, Wrba Does Not Specifically Influence The Affinity Or Mode Of Binding Of Trpr To Its Operator. It Seems Possible T

COG id: COG0655

COG function: function code R; Multimeric flavodoxin WrbA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787239, Length=197, Percent_Identity=31.4720812182741, Blast_Score=87, Evalue=9e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008254 [H]

Pfam domain/function: PF00258 Flavodoxin_1 [H]

EC number: NA

Molecular weight: Translated: 18919; Mature: 18919

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIYVVYDSEGEHTKKLAEAIAEGAGEHDAADVRIDHVSQADIRKLEEMDAIIWGCPGHF
CEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHEEECCCCCC
GTISSGLKTWIDRLGYLWAEGKLINKIGAVFCTTATTHGGLEATMLNLITPMLHQGMMVV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEE
GLPGNVPENALYGSYYGAGITCPVDSDELIGEEGLELGRALGRRVAQVADRFTAGQ
ECCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKIYVVYDSEGEHTKKLAEAIAEGAGEHDAADVRIDHVSQADIRKLEEMDAIIWGCPGHF
CEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHEEECCCCCC
GTISSGLKTWIDRLGYLWAEGKLINKIGAVFCTTATTHGGLEATMLNLITPMLHQGMMVV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEE
GLPGNVPENALYGSYYGAGITCPVDSDELIGEEGLELGRALGRRVAQVADRFTAGQ
ECCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]