Definition | Bacillus licheniformis ATCC 14580, complete genome. |
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Accession | NC_006322 |
Length | 4,222,645 |
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The map label for this gene is recX
Identifier: 52784675
GI number: 52784675
Start: 896457
End: 897248
Strand: Direct
Name: recX
Synonym: BLi00877
Alternate gene names: 52784675
Gene position: 896457-897248 (Clockwise)
Preceding gene: 52784671
Following gene: 52784676
Centisome position: 21.23
GC content: 43.43
Gene sequence:
>792_bases ATGCCATATATTACAAAGATTTCTGCCCAGAAAAACAATGAAGAGCGGGTCAATATTTTTCTGGATGAAAAATATGCGTT CAGCGTCGACCTGGACGTGCTCGTCAAGTTTGACCTGCGAAAAGGCAAAGAGCTTGATGAGCTTGATATCATTGAGATTC AATACGGAGACGACGTTAAAAAAGGGTTCAAAAAAGCGCTCGATTATTTGTCATACCGGATGCGCTCGACAAAGGAAGTT CAAGACCATCTTAAGAAAAAAGGCGTCGCAGACTCCGCGATCACAGAAATTCTGCATATGCTTAAAGGTTATAAATATTT GGACGACCGCGAATTTGCGGCTGCATATGTCAGCACCCACAGAAAAACGAGCGGCAAAGGCCCTGATGTCTTATTCAGAG AGCTTAAATTGAAAGGGATCGATGATGAACTGATTCATGAAGCGCTCAGTTCGTTTTCGTTTTCCGATCAGGTCGAGGCC GCGGTCAAGCATGCGGAAAAAGTACTGAAAAAAGAAAAAAAGCTGTCCTCCAAAGAGACGAAGCAGGCCATCGAACAGCA CCTTGTCAGAAAGGGTTTCTCCTTCGATGTCATTTCGGCCGCGCTTCAGGAAACCGATTACGAAAACGACGATGGCGCTG AGAGAGAAGCGCTTGAGAAGCAAGGAGAAAAAGCAATGAAGAGGTACGGTTATGACGGATCATACGAAACGAAAATGAAG GTCAAACAGTATCTGTTTAGAAAAGGATTTTCAATTGACTTGATTGACCAATTTTTAGATGAAAAGGGATGA
Upstream 100 bases:
>100_bases AAACCTGTCCCCCCGGCAATCGCAATCTTCATCATGATTCCTCCCTTTCATGATCATTAACCTTATTGTAAAAGAAGAAA ACAAAAGAAGGGAGTTATTT
Downstream 100 bases:
>100_bases GAAGATGGAGAAAAGATACAGTGAAATGACTGCACACGAACTGCACCAGGAAATTGCGGGTCTGACCGAAAAGGCAAGAA AAGCAGAACAAATGGGGATT
Product: recombination regulator RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MPYITKISAQKNNEERVNIFLDEKYAFSVDLDVLVKFDLRKGKELDELDIIEIQYGDDVKKGFKKALDYLSYRMRSTKEV QDHLKKKGVADSAITEILHMLKGYKYLDDREFAAAYVSTHRKTSGKGPDVLFRELKLKGIDDELIHEALSSFSFSDQVEA AVKHAEKVLKKEKKLSSKETKQAIEQHLVRKGFSFDVISAALQETDYENDDGAEREALEKQGEKAMKRYGYDGSYETKMK VKQYLFRKGFSIDLIDQFLDEKG
Sequences:
>Translated_263_residues MPYITKISAQKNNEERVNIFLDEKYAFSVDLDVLVKFDLRKGKELDELDIIEIQYGDDVKKGFKKALDYLSYRMRSTKEV QDHLKKKGVADSAITEILHMLKGYKYLDDREFAAAYVSTHRKTSGKGPDVLFRELKLKGIDDELIHEALSSFSFSDQVEA AVKHAEKVLKKEKKLSSKETKQAIEQHLVRKGFSFDVISAALQETDYENDDGAEREALEKQGEKAMKRYGYDGSYETKMK VKQYLFRKGFSIDLIDQFLDEKG >Mature_262_residues PYITKISAQKNNEERVNIFLDEKYAFSVDLDVLVKFDLRKGKELDELDIIEIQYGDDVKKGFKKALDYLSYRMRSTKEVQ DHLKKKGVADSAITEILHMLKGYKYLDDREFAAAYVSTHRKTSGKGPDVLFRELKLKGIDDELIHEALSSFSFSDQVEAA VKHAEKVLKKEKKLSSKETKQAIEQHLVRKGFSFDVISAALQETDYENDDGAEREALEKQGEKAMKRYGYDGSYETKMKV KQYLFRKGFSIDLIDQFLDEKG
Specific function: Modulates recA activity
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RECX_BACLD (Q65MA3)
Other databases:
- EMBL: CP000002 - EMBL: AE017333 - RefSeq: YP_078101.1 - RefSeq: YP_090504.1 - ProteinModelPortal: Q65MA3 - SMR: Q65MA3 - STRING: Q65MA3 - EnsemblBacteria: EBBACT00000055689 - EnsemblBacteria: EBBACT00000058566 - GeneID: 3029719 - GeneID: 3100521 - GenomeReviews: AE017333_GR - GenomeReviews: CP000002_GR - KEGG: bld:BLi00877 - KEGG: bli:BL03032 - NMPDR: fig|279010.5.peg.1390 - eggNOG: COG2137 - GeneTree: EBGT00050000002234 - HOGENOM: HBG535398 - OMA: EHIIADI - ProtClustDB: PRK14135 - BioCyc: BLIC279010-1:BLI00877-MONOMER - BioCyc: BLIC279010:BL03032-MONOMER - GO: GO:0005737 - HAMAP: MF_01114 - InterPro: IPR003783
Pfam domain/function: PF02631 RecX
EC number: NA
Molecular weight: Translated: 30354; Mature: 30223
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYITKISAQKNNEERVNIFLDEKYAFSVDLDVLVKFDLRKGKELDELDIIEIQYGDDVK CCCCCCCCCCCCCCCEEEEEEECCEEEEECHHHHEEEHHCCCCCCCCCEEEEEECCCHHH KGFKKALDYLSYRMRSTKEVQDHLKKKGVADSAITEILHMLKGYKYLDDREFAAAYVSTH HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH RKTSGKGPDVLFRELKLKGIDDELIHEALSSFSFSDQVEAAVKHAEKVLKKEKKLSSKET HCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHH KQAIEQHLVRKGFSFDVISAALQETDYENDDGAEREALEKQGEKAMKRYGYDGSYETKMK HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH VKQYLFRKGFSIDLIDQFLDEKG HHHHHHHCCCCHHHHHHHHCCCC >Mature Secondary Structure PYITKISAQKNNEERVNIFLDEKYAFSVDLDVLVKFDLRKGKELDELDIIEIQYGDDVK CCCCCCCCCCCCCCEEEEEEECCEEEEECHHHHEEEHHCCCCCCCCCEEEEEECCCHHH KGFKKALDYLSYRMRSTKEVQDHLKKKGVADSAITEILHMLKGYKYLDDREFAAAYVSTH HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH RKTSGKGPDVLFRELKLKGIDDELIHEALSSFSFSDQVEAAVKHAEKVLKKEKKLSSKET HCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHH KQAIEQHLVRKGFSFDVISAALQETDYENDDGAEREALEKQGEKAMKRYGYDGSYETKMK HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH VKQYLFRKGFSIDLIDQFLDEKG HHHHHHHCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA