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The map label for this gene is yfhC [H]

Identifier: 52784671

GI number: 52784671

Start: 893631

End: 894209

Strand: Direct

Name: yfhC [H]

Synonym: BLi00873

Alternate gene names: 52784671

Gene position: 893631-894209 (Clockwise)

Preceding gene: 52784670

Following gene: 52784675

Centisome position: 21.16

GC content: 46.8

Gene sequence:

>579_bases
ATGAACGACACGCTAGAAATCCAAAGTATTCGCGATTGCGTCAGAAATAGAAGAACGATTCGAAAGTTTAAACAGGATCC
GGTGCCGAAGGAAGTGGTGCTGGAACTCTTGGAAGATGCGATTTATGCTCCGAACCACAAGCTGACAGAACCGTGGCGAT
TCATTTATATCGGGACGGAAAACGGGAAAAAGAAGCATGCCGACAATTTAAAAGCGGCGTTTAAAGAGCTCAAGCCGAAT
ATGCAGGAAGAACAAATCAATAAGTTCAGGGAGCATATTCTCAGCGTTCCGGCTTTTCTCTTCGTTATTATGAAAGAAGA
CGAAAACGAACGGGTCAGACGGGATGATTTTGCAGCCGTCAGCTGTTTAATCCAAAATCTGCAGCTGCTCGCTTGGGAAA
AAGGCATCGGCATGGTATGGAAAAGCGGGGAAGTTCTCTCTCATGAAACACTGCACAGGTTAATGGGACTGAAGCGCGAT
GAGCAGGTAGCAGCTCTCTTGCAGATCGGATATCCTGCGGAAATTCCTGAAGCGAAGCACAGGACGCCGGCCGCACAGCT
TTTTACCGAATTAACTTAA

Upstream 100 bases:

>100_bases
AACAAACACCGCCTTTTTTAGCGAGTGGAGATCATTGCAAACGCCAGCAGTTAACATTATAATCAACAATGATAATCATT
TTCATTAAGGGGGCGGCCAC

Downstream 100 bases:

>100_bases
AGAATGAGGCCCGGAACGTCGAATCCCGGGCCTCGATTATTATTTTGACTGCCGCTTTTTCGCGCGCTTATCAGCTGCCT
GCATGCGGGCTTGTGCTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MNDTLEIQSIRDCVRNRRTIRKFKQDPVPKEVVLELLEDAIYAPNHKLTEPWRFIYIGTENGKKKHADNLKAAFKELKPN
MQEEQINKFREHILSVPAFLFVIMKEDENERVRRDDFAAVSCLIQNLQLLAWEKGIGMVWKSGEVLSHETLHRLMGLKRD
EQVAALLQIGYPAEIPEAKHRTPAAQLFTELT

Sequences:

>Translated_192_residues
MNDTLEIQSIRDCVRNRRTIRKFKQDPVPKEVVLELLEDAIYAPNHKLTEPWRFIYIGTENGKKKHADNLKAAFKELKPN
MQEEQINKFREHILSVPAFLFVIMKEDENERVRRDDFAAVSCLIQNLQLLAWEKGIGMVWKSGEVLSHETLHRLMGLKRD
EQVAALLQIGYPAEIPEAKHRTPAAQLFTELT
>Mature_192_residues
MNDTLEIQSIRDCVRNRRTIRKFKQDPVPKEVVLELLEDAIYAPNHKLTEPWRFIYIGTENGKKKHADNLKAAFKELKPN
MQEEQINKFREHILSVPAFLFVIMKEDENERVRRDDFAAVSCLIQNLQLLAWEKGIGMVWKSGEVLSHETLHRLMGLKRD
EQVAALLQIGYPAEIPEAKHRTPAAQLFTELT

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=158, Percent_Identity=24.0506329113924, Blast_Score=69, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 22330; Mature: 22330

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDTLEIQSIRDCVRNRRTIRKFKQDPVPKEVVLELLEDAIYAPNHKLTEPWRFIYIGTE
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECC
NGKKKHADNLKAAFKELKPNMQEEQINKFREHILSVPAFLFVIMKEDENERVRRDDFAAV
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
SCLIQNLQLLAWEKGIGMVWKSGEVLSHETLHRLMGLKRDEQVAALLQIGYPAEIPEAKH
HHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCC
RTPAAQLFTELT
CCHHHHHHHHCC
>Mature Secondary Structure
MNDTLEIQSIRDCVRNRRTIRKFKQDPVPKEVVLELLEDAIYAPNHKLTEPWRFIYIGTE
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECC
NGKKKHADNLKAAFKELKPNMQEEQINKFREHILSVPAFLFVIMKEDENERVRRDDFAAV
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
SCLIQNLQLLAWEKGIGMVWKSGEVLSHETLHRLMGLKRDEQVAALLQIGYPAEIPEAKH
HHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCC
RTPAAQLFTELT
CCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]