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The map label for this gene is ydeQ [C]

Identifier: 52784665

GI number: 52784665

Start: 888033

End: 888626

Strand: Direct

Name: ydeQ [C]

Synonym: BLi00867

Alternate gene names: 52784665

Gene position: 888033-888626 (Clockwise)

Preceding gene: 52784664

Following gene: 52784666

Centisome position: 21.03

GC content: 48.48

Gene sequence:

>594_bases
ATGCAGACTGCCGTTATATATGCACACCCAAATCCAAACAGTTTCAACGGAGCCATTTTAAATCAAGTCATAAAGGCGCT
TGAGGACGGTAAGCATTTTTATGACGTCATTGATTTGTATAGAGACCGGTTTGATCCCGTTCTATTATTTGATGAAAAGA
AAAGGCGCTCAGATATGAATCGCGATCCGGAAACTGCCGAATATCGAAGAATTGTCAAAAACGCCGACCATCTGATTTTC
ATTTATCCGCTTTGGTGGGGCGGAATGCCAGCGATCATGAAAGGCTTTATTGACCGCGTTTTTGCCGCCGGAGAAGCCTA
TACATATCAAGGAAAGCTGCCAAAAGGCCTGCTGAAGGCGCGCACGGCATCAGTTTACTACACGGCTGACGCTCCGTCTT
GGTATTTGCGGTTTTGGCAGCGGGATGCCGACTGGGTGACGGTTAAAGATGTGATGTTGAAGTTTTGCGGCGTACGGCGG
GTAAAGCGCCTGCTGTTTGCCGGCGTGAAAGACAGCTCTGAAGAAAAACGCACGCAATGGCTTGACCGTGTCTACCGGTC
TATAGCTCCTGCAGATCGGGGGATCAGCAAATGA

Upstream 100 bases:

>100_bases
AGGAAAGGGTTTTTCATCGTATTCGCTCCAAGTTCATTTTCTTTAAATTCTGCAAAATAAACAATATAATTCCATCATAG
GACGAAAAGGAGGAAGCGAT

Downstream 100 bases:

>100_bases
CAAAGGAGATGAAGTGGCTGGATTGGGCAAAGGAAATTCAAGCTATCGCCCAGGCGGGGCTTGCCTATACAAAAGATGAC
TTTGATCGTGAACGTTTTGA

Product: YdeQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MQTAVIYAHPNPNSFNGAILNQVIKALEDGKHFYDVIDLYRDRFDPVLLFDEKKRRSDMNRDPETAEYRRIVKNADHLIF
IYPLWWGGMPAIMKGFIDRVFAAGEAYTYQGKLPKGLLKARTASVYYTADAPSWYLRFWQRDADWVTVKDVMLKFCGVRR
VKRLLFAGVKDSSEEKRTQWLDRVYRSIAPADRGISK

Sequences:

>Translated_197_residues
MQTAVIYAHPNPNSFNGAILNQVIKALEDGKHFYDVIDLYRDRFDPVLLFDEKKRRSDMNRDPETAEYRRIVKNADHLIF
IYPLWWGGMPAIMKGFIDRVFAAGEAYTYQGKLPKGLLKARTASVYYTADAPSWYLRFWQRDADWVTVKDVMLKFCGVRR
VKRLLFAGVKDSSEEKRTQWLDRVYRSIAPADRGISK
>Mature_197_residues
MQTAVIYAHPNPNSFNGAILNQVIKALEDGKHFYDVIDLYRDRFDPVLLFDEKKRRSDMNRDPETAEYRRIVKNADHLIF
IYPLWWGGMPAIMKGFIDRVFAAGEAYTYQGKLPKGLLKARTASVYYTADAPSWYLRFWQRDADWVTVKDVMLKFCGVRR
VKRLLFAGVKDSSEEKRTQWLDRVYRSIAPADRGISK

Specific function: Unknown

COG id: COG2249

COG function: function code R; Putative NADPH-quinone reductase (modulator of drug activity B)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD(P)H dehydrogenase (quinone) family [H]

Homologues:

Organism=Homo sapiens, GI156564357, Length=198, Percent_Identity=26.7676767676768, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI1787129, Length=119, Percent_Identity=33.6134453781513, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003680 [H]

Pfam domain/function: PF02525 Flavodoxin_2 [H]

EC number: 1.6.99.- [C]

Molecular weight: Translated: 23008; Mature: 23008

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTAVIYAHPNPNSFNGAILNQVIKALEDGKHFYDVIDLYRDRFDPVLLFDEKKRRSDMN
CCCEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCHHHHCCCC
RDPETAEYRRIVKNADHLIFIYPLWWGGMPAIMKGFIDRVFAAGEAYTYQGKLPKGLLKA
CCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHH
RTASVYYTADAPSWYLRFWQRDADWVTVKDVMLKFCGVRRVKRLLFAGVKDSSEEKRTQW
HHCEEEEECCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LDRVYRSIAPADRGISK
HHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MQTAVIYAHPNPNSFNGAILNQVIKALEDGKHFYDVIDLYRDRFDPVLLFDEKKRRSDMN
CCCEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCHHHHCCCC
RDPETAEYRRIVKNADHLIFIYPLWWGGMPAIMKGFIDRVFAAGEAYTYQGKLPKGLLKA
CCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHH
RTASVYYTADAPSWYLRFWQRDADWVTVKDVMLKFCGVRRVKRLLFAGVKDSSEEKRTQW
HHCEEEEECCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LDRVYRSIAPADRGISK
HHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]