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The map label for this gene is ytcQ [H]

Identifier: 52784664

GI number: 52784664

Start: 886433

End: 887836

Strand: Direct

Name: ytcQ [H]

Synonym: BLi00866

Alternate gene names: 52784664

Gene position: 886433-887836 (Clockwise)

Preceding gene: 52784662

Following gene: 52784665

Centisome position: 20.99

GC content: 47.79

Gene sequence:

>1404_bases
ATGAAAAAGTTATGTTGCCTGATCTTGGTCTTGGTTTTTTCCGCGGGCTGTACTCAGCAAAAGGCATCAACGGAAGAGGA
CGGGGCGCTTGAAATCAATTGGCTCGTACCGCTCCACACACCGCAGCCTCCGAAAGAGAAGGCGCTTGACATCATTGAAG
ACAAAACGAATACAAAGCTGAAGCTCATCTGGGTTCCGGATTCAACAAAAGAAGAGCGGATCAATACAACCCTTGCAAGC
GGAAACATGCCTAAAGTAATGACATTGCCTGATCTTGAAGATTCAGCGGTTGTCAGCGCGCTGCGCTCGGGAATGTTCTG
GGAAATCGGACCGTATTTCAAAGACTATCCGAATTTAAGAAAACTTGATAAAACTATATTGAAAAATATTTCGGTTGATG
GCAAAGTTTACGGGATTTATAGAGAAAGGCCGATGGCCAGGCAGGGAGTCGTGATTCGGAAAGACTGGCTCGACAATCTC
GGATTGGAAATGCCGGAAACCGTTGATGACCTTTATAAAATAGCGAAAGCATTTACAGAACAGGACCCCGATCAAAACGG
AAAAGACGACACGTTCGGTCTCGCCGACCGCAATGATCTCACCTTCGGAGCGTTTAAAACCCTGGCTTCGTACTTTGGCG
CGCCGAACGAATGGGGAACGGACGAAGACGGAAATCTCTTCCCCTATTTTAAGCATGAGGCCTATAAAGACGCAATGGCA
TACATGAAAAAGCTTTATGAAGAAGGCCTGATGAACAGGGACTTTGCGGTGACAAGCAAAACGCAGCAGCAGGATTTAGT
GATTCAGGGGAAAGCGGGAATCTATATCGGCGCGATGAGCGATGCCATGAACTTGCGTGATCAGGGACTCGCTTTGAACC
CCGGCTTTCAGCTTGATATCGCAAACCGGATCAAGGGCCCCGACGGCAAGGAGCGCACATGGGCGCTCGGCGGGCATGGC
GGGATGTTCGCCATTTCGAAATCAAGCGTCAAGACTGAAAAAGAGGTCAGAAAAATCCTCGCATTTTTTGACAGAATCGC
TGAAGAAGACCTCAACAATTTGATGTTGTATGGAATAGAAGGCGTACACTATGAAAAGAAAGGGGGGAGCGGCTATTTTC
GAAAGCAGGAAAACTACCATCTGTGGGAAGCGGAAATTCAGCCGTTAAACCAGCTGATTGGCGTCAATAAACAAGCTTTA
AAAAGCGCTGAAGATCCGCTCCGCGCCAAAAATGAAAAGCTTGAGGAGGACAACCGGGCAATCGCAGTCCAGAATCCGGC
CGAACCGCTGTATTCTGCCGCACAGATGGACAGGGGAACAGAATTGAAGAAAATCATTGATGACGCCACATTTCAATTTA
TTCTCGGGGAAATCAATGAAAAAGCTTTGACCAGGCAGTCCTGA

Upstream 100 bases:

>100_bases
TATTGAATCGAAAAAGAATGCTCGGCTATGAAATATTTAGGATGGAGCATGTCGGGCATTCCTCCTTGAGAGCGTTTTCT
TAACAAACGGGAGGGATCGT

Downstream 100 bases:

>100_bases
AATGGGAGAAGCATGGCGGCGGAAAGATCATGAAAGAACTGAATGAAGATCTGAAAAAAGCAAACTAAACAGAAAACCCT
TTCCATTTTTTTGAAAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MKKLCCLILVLVFSAGCTQQKASTEEDGALEINWLVPLHTPQPPKEKALDIIEDKTNTKLKLIWVPDSTKEERINTTLAS
GNMPKVMTLPDLEDSAVVSALRSGMFWEIGPYFKDYPNLRKLDKTILKNISVDGKVYGIYRERPMARQGVVIRKDWLDNL
GLEMPETVDDLYKIAKAFTEQDPDQNGKDDTFGLADRNDLTFGAFKTLASYFGAPNEWGTDEDGNLFPYFKHEAYKDAMA
YMKKLYEEGLMNRDFAVTSKTQQQDLVIQGKAGIYIGAMSDAMNLRDQGLALNPGFQLDIANRIKGPDGKERTWALGGHG
GMFAISKSSVKTEKEVRKILAFFDRIAEEDLNNLMLYGIEGVHYEKKGGSGYFRKQENYHLWEAEIQPLNQLIGVNKQAL
KSAEDPLRAKNEKLEEDNRAIAVQNPAEPLYSAAQMDRGTELKKIIDDATFQFILGEINEKALTRQS

Sequences:

>Translated_467_residues
MKKLCCLILVLVFSAGCTQQKASTEEDGALEINWLVPLHTPQPPKEKALDIIEDKTNTKLKLIWVPDSTKEERINTTLAS
GNMPKVMTLPDLEDSAVVSALRSGMFWEIGPYFKDYPNLRKLDKTILKNISVDGKVYGIYRERPMARQGVVIRKDWLDNL
GLEMPETVDDLYKIAKAFTEQDPDQNGKDDTFGLADRNDLTFGAFKTLASYFGAPNEWGTDEDGNLFPYFKHEAYKDAMA
YMKKLYEEGLMNRDFAVTSKTQQQDLVIQGKAGIYIGAMSDAMNLRDQGLALNPGFQLDIANRIKGPDGKERTWALGGHG
GMFAISKSSVKTEKEVRKILAFFDRIAEEDLNNLMLYGIEGVHYEKKGGSGYFRKQENYHLWEAEIQPLNQLIGVNKQAL
KSAEDPLRAKNEKLEEDNRAIAVQNPAEPLYSAAQMDRGTELKKIIDDATFQFILGEINEKALTRQS
>Mature_467_residues
MKKLCCLILVLVFSAGCTQQKASTEEDGALEINWLVPLHTPQPPKEKALDIIEDKTNTKLKLIWVPDSTKEERINTTLAS
GNMPKVMTLPDLEDSAVVSALRSGMFWEIGPYFKDYPNLRKLDKTILKNISVDGKVYGIYRERPMARQGVVIRKDWLDNL
GLEMPETVDDLYKIAKAFTEQDPDQNGKDDTFGLADRNDLTFGAFKTLASYFGAPNEWGTDEDGNLFPYFKHEAYKDAMA
YMKKLYEEGLMNRDFAVTSKTQQQDLVIQGKAGIYIGAMSDAMNLRDQGLALNPGFQLDIANRIKGPDGKERTWALGGHG
GMFAISKSSVKTEKEVRKILAFFDRIAEEDLNNLMLYGIEGVHYEKKGGSGYFRKQENYHLWEAEIQPLNQLIGVNKQAL
KSAEDPLRAKNEKLEEDNRAIAVQNPAEPLYSAAQMDRGTELKKIIDDATFQFILGEINEKALTRQS

Specific function: Probably part of a binding-protein-dependent transport system [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 52646; Mature: 52646

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLCCLILVLVFSAGCTQQKASTEEDGALEINWLVPLHTPQPPKEKALDIIEDKTNTKL
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHCCCCCCEE
KLIWVPDSTKEERINTTLASGNMPKVMTLPDLEDSAVVSALRSGMFWEIGPYFKDYPNLR
EEEECCCCCCHHHHHHEEECCCCCEEEECCCCCHHHHHHHHHCCCCEEECCHHHCCCCHH
KLDKTILKNISVDGKVYGIYRERPMARQGVVIRKDWLDNLGLEMPETVDDLYKIAKAFTE
HHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHH
QDPDQNGKDDTFGLADRNDLTFGAFKTLASYFGAPNEWGTDEDGNLFPYFKHEAYKDAMA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
YMKKLYEEGLMNRDFAVTSKTQQQDLVIQGKAGIYIGAMSDAMNLRDQGLALNPGFQLDI
HHHHHHHHCCCCCCEEECCCCCCCCEEEECCCCEEEEECHHHHHHCCCCEEECCCCEEEH
ANRIKGPDGKERTWALGGHGGMFAISKSSVKTEKEVRKILAFFDRIAEEDLNNLMLYGIE
HHHCCCCCCCCCEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC
GVHYEKKGGSGYFRKQENYHLWEAEIQPLNQLIGVNKQALKSAEDPLRAKNEKLEEDNRA
CEEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHCCCCCE
IAVQNPAEPLYSAAQMDRGTELKKIIDDATFQFILGEINEKALTRQS
EEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKLCCLILVLVFSAGCTQQKASTEEDGALEINWLVPLHTPQPPKEKALDIIEDKTNTKL
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHCCCCCCEE
KLIWVPDSTKEERINTTLASGNMPKVMTLPDLEDSAVVSALRSGMFWEIGPYFKDYPNLR
EEEECCCCCCHHHHHHEEECCCCCEEEECCCCCHHHHHHHHHCCCCEEECCHHHCCCCHH
KLDKTILKNISVDGKVYGIYRERPMARQGVVIRKDWLDNLGLEMPETVDDLYKIAKAFTE
HHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHH
QDPDQNGKDDTFGLADRNDLTFGAFKTLASYFGAPNEWGTDEDGNLFPYFKHEAYKDAMA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
YMKKLYEEGLMNRDFAVTSKTQQQDLVIQGKAGIYIGAMSDAMNLRDQGLALNPGFQLDI
HHHHHHHHCCCCCCEEECCCCCCCCEEEECCCCEEEEECHHHHHHCCCCEEECCCCEEEH
ANRIKGPDGKERTWALGGHGGMFAISKSSVKTEKEVRKILAFFDRIAEEDLNNLMLYGIE
HHHCCCCCCCCCEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC
GVHYEKKGGSGYFRKQENYHLWEAEIQPLNQLIGVNKQALKSAEDPLRAKNEKLEEDNRA
CEEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHCCCCCE
IAVQNPAEPLYSAAQMDRGTELKKIIDDATFQFILGEINEKALTRQS
EEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]