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The map label for this gene is yfiD [H]

Identifier: 52784659

GI number: 52784659

Start: 880968

End: 881411

Strand: Direct

Name: yfiD [H]

Synonym: BLi00861

Alternate gene names: 52784659

Gene position: 880968-881411 (Clockwise)

Preceding gene: 52784655

Following gene: 52784660

Centisome position: 20.86

GC content: 46.85

Gene sequence:

>444_bases
ATGAGCAACAAATACGAATTAGGTGCATTAATTTTACGTTTGGTTACAGGTCTTACATTTTTGCTTCACGGGCTTTCAAA
ATTTCAAGGCGGGATTGAAAATACTGTAGGATTCTTCAGCAGTGTCGGAATTCCGGGCTTTCTCGCCTATATCGTAGCGA
TTATCGAATTGGCCGGAGGGGCTTTGATGATTCTCGGGCTCGGTACACGTGTGATTGGCCTTTTATTTGCGATTGTCATG
CTGGGGGCCATTTTCACTGTTAAGCTCTCCGCCGGTTTCATGGGAACGGATGGAGGCGCAGGCTATGAATTTGACGTTAC
GCTTCTTGCAATGTCTGTATACTTGGCCTTGAGCGGAAGCAGCATGCTGTCCCTTGGGGAAATGATCCTGAAATCAAGGA
AAGAAGGAAAAACAGATGACGCAGCAAATCCACCCGGGCACTGA

Upstream 100 bases:

>100_bases
AGGACACTGCAGACTTATTCAAGGGGATATGTTGATAGATGGATAAAGTTGGCGTTCGTCATTGGTCTTTAAAATAAAAA
TTGAACAAGAGGAGAAAATA

Downstream 100 bases:

>100_bases
GCTCGGATATGTCAAGCTGAAGGTGAGCCGTCTTGAAAGATCGGTTTCTTTTTACAGGGATGTGATCGGTTTTCAAGTAT
TAAAACAGGACGGCAAAACG

Product: YfiD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MSNKYELGALILRLVTGLTFLLHGLSKFQGGIENTVGFFSSVGIPGFLAYIVAIIELAGGALMILGLGTRVIGLLFAIVM
LGAIFTVKLSAGFMGTDGGAGYEFDVTLLAMSVYLALSGSSMLSLGEMILKSRKEGKTDDAANPPGH

Sequences:

>Translated_147_residues
MSNKYELGALILRLVTGLTFLLHGLSKFQGGIENTVGFFSSVGIPGFLAYIVAIIELAGGALMILGLGTRVIGLLFAIVM
LGAIFTVKLSAGFMGTDGGAGYEFDVTLLAMSVYLALSGSSMLSLGEMILKSRKEGKTDDAANPPGH
>Mature_146_residues
SNKYELGALILRLVTGLTFLLHGLSKFQGGIENTVGFFSSVGIPGFLAYIVAIIELAGGALMILGLGTRVIGLLFAIVML
GAIFTVKLSAGFMGTDGGAGYEFDVTLLAMSVYLALSGSSMLSLGEMILKSRKEGKTDDAANPPGH

Specific function: Essential for growth and viability in the presence of catechol and probably involved in the detoxification of catechol [H]

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 15278; Mature: 15147

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKYELGALILRLVTGLTFLLHGLSKFQGGIENTVGFFSSVGIPGFLAYIVAIIELAGG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
ALMILGLGTRVIGLLFAIVMLGAIFTVKLSAGFMGTDGGAGYEFDVTLLAMSVYLALSGS
HHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
SMLSLGEMILKSRKEGKTDDAANPPGH
HHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SNKYELGALILRLVTGLTFLLHGLSKFQGGIENTVGFFSSVGIPGFLAYIVAIIELAGG
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
ALMILGLGTRVIGLLFAIVMLGAIFTVKLSAGFMGTDGGAGYEFDVTLLAMSVYLALSGS
HHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
SMLSLGEMILKSRKEGKTDDAANPPGH
HHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8704981; 9384377 [H]