Click here to switch to the map view.

The map label for this gene is yibD [C]

Identifier: 52784605

GI number: 52784605

Start: 822716

End: 824959

Strand: Reverse

Name: yibD [C]

Synonym: BLi00806

Alternate gene names: 52784605

Gene position: 824959-822716 (Counterclockwise)

Preceding gene: 52784611

Following gene: 52784604

Centisome position: 19.54

GC content: 42.42

Gene sequence:

>2244_bases
ATGGATAATGAATTGGAATATCTGCTAGACTCTGTTGGGCTTAGCTGGAGAGAAACTGAAATATCCCAACTGATTTTTCA
TCACAAATGGCACGATGCTGCGCAGAAGCTTGAAGAGAAGCTGAAAGCCGCTCCCTTCGATCCCGGCTTGCTGATAAGCG
CTGCTTTTGTCTGTGAAAAAAAGCAGCAGGCTCAGAGAGCGTCTGAATTATATGATGATGCCCTCCTATTTGTCAGGCGC
GAACATCGACCTCGCCTCATGAAGGAGAAAGAAGACCTTTTCAAAAAAATGGTCAGGCGTCCAAAAATCATTTTTTTCGT
CAAACCGGATTTGGACCGGTTTTTGAATTCTGTCGTTGAGCACCTTTCCGGAACTTACCGGACAAAAAAAATCGTGGTTC
ATGACCTGAATCAAATCGACGCTGGCATGCAATGGGCGGATATTTGCTGGTTTGAATGGTGCGATGATTTATTGATCCAC
GGGAGCAAAGTCCCTTCTGCAGCGGCTAAAACATTAATATGCAGACTCCACAGCTATGAAGCATTTACTTTTTATATTAA
AAAGGTATATTGGCAAGCGGTGGACCAAGTGATTTTTGACGGAGAGCATTTGCGGGAATACGTATTGGATCAAGTCAAGG
CGTTGAAAAAAGAGAAAACGGCCGTCGTTCCAAATGGAATCAAGCTAGATCAATACACTTTTAAACAAAGGCAAAAAGGC
TTTCACATCGCTTATGTCGGCTATATCAACTATAAAAAAGGGCCGATGCTTTTGCTGCAGGCTTTCAAAGCACTGATTGA
CAAAGACCCAAGATACAAACTGTTTATCGCCGGGACGTTTCAGGACGCCCGCTATCAGTTGTACTTCAAGCAAATGATTG
ATGAACTGCGGCTGACTGACAGCGTCCAATTTGACGGATGGCAGGATGATATGAATCAATACTTGGAAGATAAGCATTAC
CTGATTTGCACGAGCCTTCTTGAAAGTCAGCATATGTCGGCCATGGAAGCGATGGCTAAAGGCATAAAACCGCTGATTCA
CAATTTTTACGGCGCAAAGACGATATACGATGAATCAGTTGTTTGGAATACAATAGATGAATTCGTGGCCATGATCACAA
GCGGTGATTATACATCTCTCCATTATCGGTCGTTTATTGAAGAGCATTATTCATATGACCTGAGCATGCGCAAAATTGAA
GAGATGATTTCAGGCTTTGCAAAGCAGTCAGAGTTGACGGTTATGCCAAATCCGCCGCTGATTACGGTAGGCATCATCAA
CTATAATTACAGTAATTTTATTGATGAATGCCTTCAATCCGTTTTAAATCAACTCTACCCTAATATCGACATTCTGATCG
TTGACGACCATTCAACTGACGACTCCATGCAAAAAATCAGCAGCTATCAAAAAACGCATCCGCACATTCGAACGATATGC
CACAGCGAAAATACAAAACTTCCTGATCTCGCTTTTAAGGAAATCTTCCAAGAGGCAAAGGGAGAATATGTTTTGCTTTT
AAGCGCAGATGATTTCCTCCCGCACAATTTGGTGATCCATGACTTTATGCAATGCTTTTTTGAAGAAGAGGGATTGGATT
ATGTTTACGGCGACCTTTTGCTCGTTGATCAACACGGGAAAAATGCGGGTCTGTGGACATATCAAGAGTATGGCGATGAG
GAGCTGGTGAGGACTATTTTTCAAAGGGGCGGCTCAGGCATTGTCCCGATGGTGGGCATGTTTAAAGCATCTTATTATCA
GCAAAAAGGCTTCACTTGGCTGGTTGATCCGCAAAAGCCGCTTGCAGGGGATGTGCTGAATTGTTTGGCCAACACGAAGC
GCGGCTGGAAGCGGCGCTATTTAAAAAAACCTGTATTATGCTACCGCCGCCACCAAAAAAACATTTCCTACCAATTGCAT
AAAAGAATTCAATCGCTTGTGTACGTCATGGATTATATTGTGAAAGAATTTGACGAAAGCGTCTATTTTCCTCATATCAA
ATGGAAGGAGCTTGAGGAAAATCAAAGACAGTCCTTGAAATATTTCAGCATCGGAAAAACCTTTTGGAGAATGGCCCGGA
GATACGCACAAAACGGATATACCCGGCATTTAGATCAAGACGCCAAAAAAGAATGCATTCAGCCGCTCCTGGATAAAATG
GATGAATACTTCCAATTAAGCCTCGCTTCAGACAATCAGTATGAACGATATATGAAAAATATTAAAAAAATCCAGCTGAT
ATAA

Upstream 100 bases:

>100_bases
TCAAGGCTGCGCCATTTCCAAAGTATTTTTCATAGAACTTTCTTTTTTCGTTTGAATATAGATACTACTAGCGAAAATGT
GTTTAACCAGGAGGTTTCAG

Downstream 100 bases:

>100_bases
GGCCTTCCGCTCTGTGGAAGGTTTTTCTCTTATACTCTCGCACAAATACACAGTCATATAGATTCATTTATACGTATGAT
AGAGCGCACAAAGTGTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Glycosyl Transferase Family Protein; Glycosyltransferase; Glycosyl Transferase; Galactosyltransferase-Related Protein; Spore Coat Polysaccharide Biosynthesis Protein SpsA; TPR Repeat-Containing Glycosyltransferase; Tetratricopeptide TPR_2 Repeat Protein; Minor Teichoic Acid Biosynthesis Protein; Glycosyl Transferase Group 1 Family Protein; TPR-Repeat-Containing Protein; Glycosyl Transferase Group 2 Family Protein; Glucosyltransferase

Number of amino acids: Translated: 747; Mature: 747

Protein sequence:

>747_residues
MDNELEYLLDSVGLSWRETEISQLIFHHKWHDAAQKLEEKLKAAPFDPGLLISAAFVCEKKQQAQRASELYDDALLFVRR
EHRPRLMKEKEDLFKKMVRRPKIIFFVKPDLDRFLNSVVEHLSGTYRTKKIVVHDLNQIDAGMQWADICWFEWCDDLLIH
GSKVPSAAAKTLICRLHSYEAFTFYIKKVYWQAVDQVIFDGEHLREYVLDQVKALKKEKTAVVPNGIKLDQYTFKQRQKG
FHIAYVGYINYKKGPMLLLQAFKALIDKDPRYKLFIAGTFQDARYQLYFKQMIDELRLTDSVQFDGWQDDMNQYLEDKHY
LICTSLLESQHMSAMEAMAKGIKPLIHNFYGAKTIYDESVVWNTIDEFVAMITSGDYTSLHYRSFIEEHYSYDLSMRKIE
EMISGFAKQSELTVMPNPPLITVGIINYNYSNFIDECLQSVLNQLYPNIDILIVDDHSTDDSMQKISSYQKTHPHIRTIC
HSENTKLPDLAFKEIFQEAKGEYVLLLSADDFLPHNLVIHDFMQCFFEEEGLDYVYGDLLLVDQHGKNAGLWTYQEYGDE
ELVRTIFQRGGSGIVPMVGMFKASYYQQKGFTWLVDPQKPLAGDVLNCLANTKRGWKRRYLKKPVLCYRRHQKNISYQLH
KRIQSLVYVMDYIVKEFDESVYFPHIKWKELEENQRQSLKYFSIGKTFWRMARRYAQNGYTRHLDQDAKKECIQPLLDKM
DEYFQLSLASDNQYERYMKNIKKIQLI

Sequences:

>Translated_747_residues
MDNELEYLLDSVGLSWRETEISQLIFHHKWHDAAQKLEEKLKAAPFDPGLLISAAFVCEKKQQAQRASELYDDALLFVRR
EHRPRLMKEKEDLFKKMVRRPKIIFFVKPDLDRFLNSVVEHLSGTYRTKKIVVHDLNQIDAGMQWADICWFEWCDDLLIH
GSKVPSAAAKTLICRLHSYEAFTFYIKKVYWQAVDQVIFDGEHLREYVLDQVKALKKEKTAVVPNGIKLDQYTFKQRQKG
FHIAYVGYINYKKGPMLLLQAFKALIDKDPRYKLFIAGTFQDARYQLYFKQMIDELRLTDSVQFDGWQDDMNQYLEDKHY
LICTSLLESQHMSAMEAMAKGIKPLIHNFYGAKTIYDESVVWNTIDEFVAMITSGDYTSLHYRSFIEEHYSYDLSMRKIE
EMISGFAKQSELTVMPNPPLITVGIINYNYSNFIDECLQSVLNQLYPNIDILIVDDHSTDDSMQKISSYQKTHPHIRTIC
HSENTKLPDLAFKEIFQEAKGEYVLLLSADDFLPHNLVIHDFMQCFFEEEGLDYVYGDLLLVDQHGKNAGLWTYQEYGDE
ELVRTIFQRGGSGIVPMVGMFKASYYQQKGFTWLVDPQKPLAGDVLNCLANTKRGWKRRYLKKPVLCYRRHQKNISYQLH
KRIQSLVYVMDYIVKEFDESVYFPHIKWKELEENQRQSLKYFSIGKTFWRMARRYAQNGYTRHLDQDAKKECIQPLLDKM
DEYFQLSLASDNQYERYMKNIKKIQLI
>Mature_747_residues
MDNELEYLLDSVGLSWRETEISQLIFHHKWHDAAQKLEEKLKAAPFDPGLLISAAFVCEKKQQAQRASELYDDALLFVRR
EHRPRLMKEKEDLFKKMVRRPKIIFFVKPDLDRFLNSVVEHLSGTYRTKKIVVHDLNQIDAGMQWADICWFEWCDDLLIH
GSKVPSAAAKTLICRLHSYEAFTFYIKKVYWQAVDQVIFDGEHLREYVLDQVKALKKEKTAVVPNGIKLDQYTFKQRQKG
FHIAYVGYINYKKGPMLLLQAFKALIDKDPRYKLFIAGTFQDARYQLYFKQMIDELRLTDSVQFDGWQDDMNQYLEDKHY
LICTSLLESQHMSAMEAMAKGIKPLIHNFYGAKTIYDESVVWNTIDEFVAMITSGDYTSLHYRSFIEEHYSYDLSMRKIE
EMISGFAKQSELTVMPNPPLITVGIINYNYSNFIDECLQSVLNQLYPNIDILIVDDHSTDDSMQKISSYQKTHPHIRTIC
HSENTKLPDLAFKEIFQEAKGEYVLLLSADDFLPHNLVIHDFMQCFFEEEGLDYVYGDLLLVDQHGKNAGLWTYQEYGDE
ELVRTIFQRGGSGIVPMVGMFKASYYQQKGFTWLVDPQKPLAGDVLNCLANTKRGWKRRYLKKPVLCYRRHQKNISYQLH
KRIQSLVYVMDYIVKEFDESVYFPHIKWKELEENQRQSLKYFSIGKTFWRMARRYAQNGYTRHLDQDAKKECIQPLLDKM
DEYFQLSLASDNQYERYMKNIKKIQLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 88129; Mature: 88129

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHEEEECCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDNELEYLLDSVGLSWRETEISQLIFHHKWHDAAQKLEEKLKAAPFDPGLLISAAFVCEK
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
KQQAQRASELYDDALLFVRREHRPRLMKEKEDLFKKMVRRPKIIFFVKPDLDRFLNSVVE
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHH
HLSGTYRTKKIVVHDLNQIDAGMQWADICWFEWCDDLLIHGSKVPSAAAKTLICRLHSYE
HHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCH
AFTFYIKKVYWQAVDQVIFDGEHLREYVLDQVKALKKEKTAVVPNGIKLDQYTFKQRQKG
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHCC
FHIAYVGYINYKKGPMLLLQAFKALIDKDPRYKLFIAGTFQDARYQLYFKQMIDELRLTD
CEEEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCC
SVQFDGWQDDMNQYLEDKHYLICTSLLESQHMSAMEAMAKGIKPLIHNFYGAKTIYDESV
CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHH
VWNTIDEFVAMITSGDYTSLHYRSFIEEHYSYDLSMRKIEEMISGFAKQSELTVMPNPPL
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEECCCCCE
ITVGIINYNYSNFIDECLQSVLNQLYPNIDILIVDDHSTDDSMQKISSYQKTHPHIRTIC
EEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHH
HSENTKLPDLAFKEIFQEAKGEYVLLLSADDFLPHNLVIHDFMQCFFEEEGLDYVYGDLL
CCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEECCEE
LVDQHGKNAGLWTYQEYGDEELVRTIFQRGGSGIVPMVGMFKASYYQQKGFTWLVDPQKP
EEECCCCCCCCEEHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCC
LAGDVLNCLANTKRGWKRRYLKKPVLCYRRHQKNISYQLHKRIQSLVYVMDYIVKEFDES
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
VYFPHIKWKELEENQRQSLKYFSIGKTFWRMARRYAQNGYTRHLDQDAKKECIQPLLDKM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHH
DEYFQLSLASDNQYERYMKNIKKIQLI
HHHHEEEECCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA