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The map label for this gene is yerO [H]

Identifier: 52784535

GI number: 52784535

Start: 740523

End: 741371

Strand: Reverse

Name: yerO [H]

Synonym: BLi00736

Alternate gene names: 52784535

Gene position: 741371-740523 (Counterclockwise)

Preceding gene: 52784538

Following gene: 52784534

Centisome position: 17.56

GC content: 44.17

Gene sequence:

>849_bases
ATGACAGAAAAAGAAGAAAAAATCATTAAAGCAGGCCTGCACCTGTTCGCGAAAAACGGTTTTGCTTCCACAACGATTCA
AGACATCGCCAATGAATGCAACATCTCAAAAGGGGCTTTCTACCTGCATTTCAAGTCGAAAGAAGCTCTTTTGCTCGCAA
TCATTAAGTATTATATCGATCGAATGATGGAAAATATGAAGATCATTCAGCAGAAGAATTTCCCTCCTAAGGAAACGTTC
AAGGAGCAGATTGCTTATCAATTCAGCGAGAGCAAGGAGCACCGCGATTTTATTCTCGTGATGATCAGCGAACACAGCAT
ACCGGAAAACAGCAAGATCGAAGAATATTTTAAAAATGTCAGCCAAAAATTCCACGAGACGTATCAAAACGCGCTGTCAG
CCGCCTACGGTGACATTGTGAAGCCTTATCTGTCAGACTTGTCCGTGATCGTTCAAGGCATCGTGCAGTCTTATCAAAAT
TTGTTTATCTTTAATGAACTGGATATCGATTTTTACGAACTTGCGGATTTTATTATGAGAAGAATCGATGACATGATTGA
TGGCATGGTTCAAAACGGGGAGCAGCCGATCTTGGCCGGCCGGACGTACAGCTATTACCGGAACGCCGGCAATACGGCCG
ATAAACATACGATTTTGCGGGAGCTTGAAGATGCCAAACGTCAGCCGGAGCTTTCGGAAGACATTCTCATTACACTGGAT
GTGATCGAGGAAGAGCTGAGAAAGGATTCGCCCCGCGCACCCGTGCTCCAAGGCATGCTGACAAACTTGCAGCATCAGGA
CAATGTTCAGCATCTATATGGAATGATCACCCGTTTCCTTCATTCATAA

Upstream 100 bases:

>100_bases
CTGGTCATTCTATACAATAATAAACTTCAAAAGTAAACAGCGTCAACTTATATATGTTAAAATTTATTCAATTTTAAAGA
AGTGTTAAAGGGGTACATTC

Downstream 100 bases:

>100_bases
AGCAGCCTTATGGCTGTTTTTATATTCCCTTACAATAAGACGATCTGACCATGTATTTTTTGAAAGCAGCATGTATAATA
AGATCGCTTAAGACAATCTA

Product: YerO

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MTEKEEKIIKAGLHLFAKNGFASTTIQDIANECNISKGAFYLHFKSKEALLLAIIKYYIDRMMENMKIIQQKNFPPKETF
KEQIAYQFSESKEHRDFILVMISEHSIPENSKIEEYFKNVSQKFHETYQNALSAAYGDIVKPYLSDLSVIVQGIVQSYQN
LFIFNELDIDFYELADFIMRRIDDMIDGMVQNGEQPILAGRTYSYYRNAGNTADKHTILRELEDAKRQPELSEDILITLD
VIEEELRKDSPRAPVLQGMLTNLQHQDNVQHLYGMITRFLHS

Sequences:

>Translated_282_residues
MTEKEEKIIKAGLHLFAKNGFASTTIQDIANECNISKGAFYLHFKSKEALLLAIIKYYIDRMMENMKIIQQKNFPPKETF
KEQIAYQFSESKEHRDFILVMISEHSIPENSKIEEYFKNVSQKFHETYQNALSAAYGDIVKPYLSDLSVIVQGIVQSYQN
LFIFNELDIDFYELADFIMRRIDDMIDGMVQNGEQPILAGRTYSYYRNAGNTADKHTILRELEDAKRQPELSEDILITLD
VIEEELRKDSPRAPVLQGMLTNLQHQDNVQHLYGMITRFLHS
>Mature_281_residues
TEKEEKIIKAGLHLFAKNGFASTTIQDIANECNISKGAFYLHFKSKEALLLAIIKYYIDRMMENMKIIQQKNFPPKETFK
EQIAYQFSESKEHRDFILVMISEHSIPENSKIEEYFKNVSQKFHETYQNALSAAYGDIVKPYLSDLSVIVQGIVQSYQNL
FIFNELDIDFYELADFIMRRIDDMIDGMVQNGEQPILAGRTYSYYRNAGNTADKHTILRELEDAKRQPELSEDILITLDV
IEEELRKDSPRAPVLQGMLTNLQHQDNVQHLYGMITRFLHS

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 32823; Mature: 32692

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEKEEKIIKAGLHLFAKNGFASTTIQDIANECNISKGAFYLHFKSKEALLLAIIKYYID
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHH
RMMENMKIIQQKNFPPKETFKEQIAYQFSESKEHRDFILVMISEHSIPENSKIEEYFKNV
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHH
SQKFHETYQNALSAAYGDIVKPYLSDLSVIVQGIVQSYQNLFIFNELDIDFYELADFIMR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHH
RIDDMIDGMVQNGEQPILAGRTYSYYRNAGNTADKHTILRELEDAKRQPELSEDILITLD
HHHHHHHHHHHCCCCCEEECCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
VIEEELRKDSPRAPVLQGMLTNLQHQDNVQHLYGMITRFLHS
HHHHHHHCCCCCCHHHHHHHHHCCHHCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TEKEEKIIKAGLHLFAKNGFASTTIQDIANECNISKGAFYLHFKSKEALLLAIIKYYID
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHH
RMMENMKIIQQKNFPPKETFKEQIAYQFSESKEHRDFILVMISEHSIPENSKIEEYFKNV
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHH
SQKFHETYQNALSAAYGDIVKPYLSDLSVIVQGIVQSYQNLFIFNELDIDFYELADFIMR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHH
RIDDMIDGMVQNGEQPILAGRTYSYYRNAGNTADKHTILRELEDAKRQPELSEDILITLD
HHHHHHHHHHHCCCCCEEECCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
VIEEELRKDSPRAPVLQGMLTNLQHQDNVQHLYGMITRFLHS
HHHHHHHCCCCCCHHHHHHHHHCCHHCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]