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The map label for this gene is ydhT [H]

Identifier: 52784534

GI number: 52784534

Start: 739316

End: 740398

Strand: Reverse

Name: ydhT [H]

Synonym: BLi00735

Alternate gene names: 52784534

Gene position: 740398-739316 (Counterclockwise)

Preceding gene: 52784535

Following gene: 52784528

Centisome position: 17.53

GC content: 51.25

Gene sequence:

>1083_bases
GTGAAAAAAAACATCGTTTGTTCAATCTTCGCGCTGCTCCTTGCTTTTGCCGTTTCGCAGCCGAGCTATGCACACACCGT
TTCTCCGGTGAACCCGAATGCCCAGCCGACGACGAAAGCGGTGATGAACTGGCTCGCCCACCTGCCCAATCGGACGGAAA
GCCGGGTGATGTCCGGGGCGTTCGGAGGATACAGCCTCGACACATTTTCAACGGCTGAAGCCGACCGGATCAAACAGGCA
ACAGGACAGCTGCCGGCCATATACGGCTGCGATTATGCAAGAGGATGGCTGGAGCCGGAAAAGATCGCCGATACGATTGA
CTACAGCTGCAACCGTGATTTGATCGCATACTGGAAAAGCGGAGGCATTCCGCAAATCAGCATGCACCTCGCAAACCCCG
CGTTTACTTCGGGTCATTATAAAACTCAGATTTCAAACAGCCAGTATGAGAGAATTTTAGATTCTTCCACTCCTGAAGGA
AAGCGGCTTGAGGCGATGCTGAGCAAAATCGCGGACGGCCTCCAGGAGCTTGAAAATGAAGGCGTGCCCGTTCTATTCAG
ACCCCTTCACGAAATGAACGGCGAATGGTTCTGGTGGGGGCTGACGCAATATAATCAAAAAGACAGCGAAAGAATCTCCT
TGTACAAACAGCTCTATGTGAAAATCTATGACTATATGACAAAAACAAGAGGCCTGGATCATCTCTTGTGGGTGTATGCG
CCGGACGCCAACAGAGACTTTAAAACGGACTTTTATCCGGGCGCATCATATGTGGACATTGTCGGGCTTGACGCTTATTT
TGATGACCCGTACGCCATTGATGGCTACGAAGAGCTCACATCGCTGAACAAGCCGTTTGCCTTTACAGAAGTCGGACCGC
AGACGACAAACGGCGGGCTGGATTACGCGCGGTTTATCCATGCCATCAAAGAAAAATACCCGAAAACGACGTACTTCCTG
GCGTGGAACGATGAGTGGAGCCCGGCTGTGAATAAGGGAGCGGACACCCTCTATCTTCATCCATGGACGCTGAATAAAGG
AGAGATATGGGACGGCGATTCTTTGACGCCTGTCGTGGAATAA

Upstream 100 bases:

>100_bases
TTCCCTTACAATAAGACGATCTGACCATGTATTTTTTGAAAGCAGCATGTATAATAAGATCGCTTAAGACAATCTATATG
TTTCAGGGGGTTTTACCTTA

Downstream 100 bases:

>100_bases
TGAAAAAACCTTGGAGAGTCATTCTCCAAGGTTTTTTTGAAACAGCTTGTTCTGTCCTTTTGAGGCTGATCCTGTTATTT
AATATCCATGGCTTTCATTA

Product: YdhT

Products: NA

Alternate protein names: 1,4-beta-D-mannan mannanohydrolase; Beta-mannanase; Glucomannan utilization protein G [H]

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MKKNIVCSIFALLLAFAVSQPSYAHTVSPVNPNAQPTTKAVMNWLAHLPNRTESRVMSGAFGGYSLDTFSTAEADRIKQA
TGQLPAIYGCDYARGWLEPEKIADTIDYSCNRDLIAYWKSGGIPQISMHLANPAFTSGHYKTQISNSQYERILDSSTPEG
KRLEAMLSKIADGLQELENEGVPVLFRPLHEMNGEWFWWGLTQYNQKDSERISLYKQLYVKIYDYMTKTRGLDHLLWVYA
PDANRDFKTDFYPGASYVDIVGLDAYFDDPYAIDGYEELTSLNKPFAFTEVGPQTTNGGLDYARFIHAIKEKYPKTTYFL
AWNDEWSPAVNKGADTLYLHPWTLNKGEIWDGDSLTPVVE

Sequences:

>Translated_360_residues
MKKNIVCSIFALLLAFAVSQPSYAHTVSPVNPNAQPTTKAVMNWLAHLPNRTESRVMSGAFGGYSLDTFSTAEADRIKQA
TGQLPAIYGCDYARGWLEPEKIADTIDYSCNRDLIAYWKSGGIPQISMHLANPAFTSGHYKTQISNSQYERILDSSTPEG
KRLEAMLSKIADGLQELENEGVPVLFRPLHEMNGEWFWWGLTQYNQKDSERISLYKQLYVKIYDYMTKTRGLDHLLWVYA
PDANRDFKTDFYPGASYVDIVGLDAYFDDPYAIDGYEELTSLNKPFAFTEVGPQTTNGGLDYARFIHAIKEKYPKTTYFL
AWNDEWSPAVNKGADTLYLHPWTLNKGEIWDGDSLTPVVE
>Mature_360_residues
MKKNIVCSIFALLLAFAVSQPSYAHTVSPVNPNAQPTTKAVMNWLAHLPNRTESRVMSGAFGGYSLDTFSTAEADRIKQA
TGQLPAIYGCDYARGWLEPEKIADTIDYSCNRDLIAYWKSGGIPQISMHLANPAFTSGHYKTQISNSQYERILDSSTPEG
KRLEAMLSKIADGLQELENEGVPVLFRPLHEMNGEWFWWGLTQYNQKDSERISLYKQLYVKIYDYMTKTRGLDHLLWVYA
PDANRDFKTDFYPGASYVDIVGLDAYFDDPYAIDGYEELTSLNKPFAFTEVGPQTTNGGLDYARFIHAIKEKYPKTTYFL
AWNDEWSPAVNKGADTLYLHPWTLNKGEIWDGDSLTPVVE

Specific function: Seems to be involved in the degradation of glucomannan [H]

COG id: COG4124

COG function: function code G; Beta-mannanase

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 26 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022790
- InterPro:   IPR000805
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR016714 [H]

Pfam domain/function: PF02156 Glyco_hydro_26 [H]

EC number: =3.2.1.78 [H]

Molecular weight: Translated: 40792; Mature: 40792

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS00443 GATASE_TYPE_II

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNIVCSIFALLLAFAVSQPSYAHTVSPVNPNAQPTTKAVMNWLAHLPNRTESRVMSGA
CCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCC
FGGYSLDTFSTAEADRIKQATGQLPAIYGCDYARGWLEPEKIADTIDYSCNRDLIAYWKS
CCCCCCCCCCCHHHHHHHHHHCCCCEEECCCHHHCCCCHHHHHHHHCCCCCCCCEEEECC
GGIPQISMHLANPAFTSGHYKTQISNSQYERILDSSTPEGKRLEAMLSKIADGLQELENE
CCCCEEEEEECCCCCCCCCEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC
GVPVLFRPLHEMNGEWFWWGLTQYNQKDSERISLYKQLYVKIYDYMTKTRGLDHLLWVYA
CCCEEEECHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
PDANRDFKTDFYPGASYVDIVGLDAYFDDPYAIDGYEELTSLNKPFAFTEVGPQTTNGGL
CCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEECCHHHHHHCCCCEEEEECCCCCCCCCH
DYARFIHAIKEKYPKTTYFLAWNDEWSPAVNKGADTLYLHPWTLNKGEIWDGDSLTPVVE
HHHHHHHHHHHHCCCEEEEEEECCCCCCHHCCCCCEEEEECEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKNIVCSIFALLLAFAVSQPSYAHTVSPVNPNAQPTTKAVMNWLAHLPNRTESRVMSGA
CCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCC
FGGYSLDTFSTAEADRIKQATGQLPAIYGCDYARGWLEPEKIADTIDYSCNRDLIAYWKS
CCCCCCCCCCCHHHHHHHHHHCCCCEEECCCHHHCCCCHHHHHHHHCCCCCCCCEEEECC
GGIPQISMHLANPAFTSGHYKTQISNSQYERILDSSTPEGKRLEAMLSKIADGLQELENE
CCCCEEEEEECCCCCCCCCEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC
GVPVLFRPLHEMNGEWFWWGLTQYNQKDSERISLYKQLYVKIYDYMTKTRGLDHLLWVYA
CCCEEEECHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
PDANRDFKTDFYPGASYVDIVGLDAYFDDPYAIDGYEELTSLNKPFAFTEVGPQTTNGGL
CCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEECCHHHHHHCCCCEEEEECCCCCCCCCH
DYARFIHAIKEKYPKTTYFLAWNDEWSPAVNKGADTLYLHPWTLNKGEIWDGDSLTPVVE
HHHHHHHHHHHHCCCEEEEEEECCCCCCHHCCCCCEEEEECEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377; 10658653 [H]